Oceanisphaera donghaensis (DSM 17589, KCTC 12522, BL1)

Name: Oceanisphaera donghaensis (DSM 17589, KCTC 12522, BL1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 292

Type strain

Strain Designation BL1

Culture col. no. DSM 17589 KCTC 12522 BL1

NCBI tax ID(s) 346183

Special Collections DSMZ KCTC Literature strains

History DSMZ <- S.-K. Rhee, Chungbuk Natl. Univ., Dept. of Microbiology and Biotechnology Research Institute, Korea; BL1 KCTC <- SK Rhee, Chungbuk Natl. Univ.

Links

Oceanisphaera donghaensis BL1 is an aerobe, Gram-negative, motile bacterium that was isolated from marine sediment.

Gram-negative motile rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397916

KCTC 12522,DSM 17589

@ref 20215

Last LPSN update 2026-05-29 08:24:59

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Aeromonadales

Family Aeromonadaceae

Genus Oceanisphaera

Species Oceanisphaera donghaensis

Full scientific name Oceanisphaera donghaensis Park et al. 2006

Morphology

Cell morphology

@ref	Gram stain	Cell width	Cell shape	Motility
31719	negative	1-1.2 µm	rod-shaped
67771	negative

Pigmentation

31719

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7075	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7075	positive	growth	30
31719	positive	growth	04-42
31719	positive	optimum	30-42
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH
31719	positive	optimum	7
31719	positive	growth	7

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
31719	aerobe
67771	aerobe

Spore formation

31719

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31719	NaCl	positive	growth	0.5-8 %
31719	NaCl	positive	optimum	0.5-8 %

Observation

31719

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31719	16947 ChEBI	citrate	+	carbon source
31719	25115 ChEBI	malate	+	carbon source
31719	17632 ChEBI	nitrate	+	reduction

Enzymes

@ref	Value	Activity	Ec
31719	catalase	+	1.11.1.6
31719	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7075	marine sediment	East Sea	Republic of Korea	KOR	Asia
67771	From ocean sediment	East Sea	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence DQ190441 (>99% sequence identity) for Oceanisphaera donghaensis from Microbeatlas

Aquatic Samples	148
Soil Samples	14
Animal Samples	27
Plant Samples	6
Total Samples	195

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7075	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7075	Oceanisphaera donghaensis strain BL1 16S ribosomal RNA gene, partial sequence	DQ190441	1492		346183

GC content

@ref	GC-content (mol%)	Method
7075	56.6	high performance liquid chromatography (HPLC)
31719	56.6

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanisphaera psychrotolerans sp. nov., isolated from coastal sediment samples.	Zhou S, Wang H, Wang Y, Ma K, He M, Chen X, Kong D, Guo X, Ruan Z, Zhao B	Int J Syst Evol Microbiol	10.1099/ijs.0.000331	2015
Phylogeny	Oceanisphaera arctica sp. nov., isolated from Arctic marine sediment, and emended description of the genus Oceanisphaera.	Srinivas TNR, Reddy PVV, Begum Z, Manasa P, Shivaji S	Int J Syst Evol Microbiol	10.1099/ijs.0.036475-0	2011
Phylogeny	Oceanisphaera ostreae sp. nov., isolated from seawater of an oyster farm, and emended description of the genus Oceanisphaera Romanenko et al. 2003.	Choi WC, Kang SJ, Jung YT, Oh TK, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.029496-0	2011
Phylogeny	Oceanisphaera donghaensis sp. nov., a halophilic bacterium from the East Sea, Korea.	Park SJ, Kang CH, Nam YD, Bae JW, Park YH, Quan ZX, Moon DS, Kim HJ, Roh DH, Rhee SK	Int J Syst Evol Microbiol	10.1099/ijs.0.64116-0	2006

References

#7075	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17589
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27995	IJSEM 895 2006 ( DOI 10.1099/ijs.0.64116-0 , PubMed 16585712 )
#31719	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27995
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Oceanisphaera donghaensis (DSM 17589, KCTC 12522, BL1)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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