Strain identifier

BacDive ID: 292

Type strain: Yes

Species: Oceanisphaera donghaensis

Strain Designation: BL1

Culture col. no.: DSM 17589, KCTC 12522

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7075

BacDive-ID: 292

DSM-Number: 17589

keywords: gram-negative, mesophilic, aerobe, Bacteria, 16S sequence, motile, rod-shaped

description: Oceanisphaera donghaensis BL1 is an aerobe, mesophilic, gram-negative bacterium that was isolated from marine sediment.

strain history: <- S.-K. Rhee, Chungbuk Natl. Univ., Dept. of Microbiology and Biotechnology Research Institute, Korea; BL1

doi: 10.13145/bacdive292.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Aeromonadales
  • family: Aeromonadaceae
  • genus: Oceanisphaera
  • species: Oceanisphaera donghaensis
  • full scientific name: Oceanisphaera donghaensis Park et al. 2006

@ref: 7075

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Aeromonadales

family: Aeromonadaceae

genus: Oceanisphaera

species: Oceanisphaera donghaensis

full scientific name: Oceanisphaera donghaensis Park et al. 2006

strain designation: BL1

type strain: yes

Morphology

cell morphology

  • @ref: 31719
  • gram stain: negative
  • cell width: 1-1.2 ┬Ám
  • cell shape: rod-shaped
  • motility: yes

pigmentation

  • @ref: 31719
  • production: yes

Culture and growth conditions

culture medium

  • @ref: 7075
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf

culture temp

@refgrowthtypetemperaturerange
7075positivegrowth30mesophilic
31719positivegrowth04-42
31719positiveoptimum30-42

culture pH

@refabilitytypepH
31719positivegrowth7
31719positiveoptimum7

Physiology and metabolism

oxygen tolerance

  • @ref: 31719
  • oxygen tolerance: aerobe

spore formation

  • @ref: 31719
  • spore formation: no

halophily

@refsaltgrowthtested relationconcentration
31719NaClpositivegrowth0.5-8 %
31719NaClpositiveoptimum0.5-8 %

observation

  • @ref: 31719
  • observation: aggregates in chains

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
3171916947citrate+carbon source
3171925115malate+carbon source
3171917632nitrate+reduction

enzymes

@refvalueactivityec
31719catalase+1.11.1.6
31719cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

  • @ref: 7075
  • sample type: marine sediment
  • geographic location: East Sea
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Marine
#Environmental#Aquatic#Sediment

Safety information

risk assessment

  • @ref: 7075
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7075
  • description: Oceanisphaera donghaensis strain BL1 16S ribosomal RNA gene, partial sequence
  • accession: DQ190441
  • length: 1492
  • database: ena
  • NCBI tax ID: 346183

GC content

@refGC-contentmethod
707556.6high performance liquid chromatography (HPLC)
3171956.6

External links

@ref: 7075

culture collection no.: DSM 17589, KCTC 12522

straininfo link

@refpassport
20218http://www.straininfo.net/strains/677440
20218http://www.straininfo.net/strains/677441

Reference

@idauthorscataloguedoi/urltitlejournalpubmedID_cross_reference
7075Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17589)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17589
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
2799510.1099/ijs.0.64116-0
31719Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information27995