Clostridium nitrophenolicum (DSM 21057, JCM 14030, MTCC 7832)

Name: Clostridium nitrophenolicum (DSM 21057, JCM 14030, MTCC 7832)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2847

Type strain

Culture col. no. DSM 21057 JCM 14030 MTCC 7832

NCBI tax ID(s) 382954

Special Collections DSMZ JCM Literature strains

History <- JCM <- R. K. Jain; 1D R. K. Jain 1D.

Links

Clostridium nitrophenolicum DSM 21057 is an anaerobe, spore-forming, Gram-positive prokaryote that was isolated from subsurface soil sample.

spore-forming Gram-positive motile rod-shaped anaerobe 16S sequence

Name and taxonomic classification

SI-ID 309438

JCM 14030,DSM 21057

@ref 20215

Last LPSN update 2025-12-16 09:47:24

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium nitrophenolicum

Full scientific name Clostridium nitrophenolicum Suresh et al. 2007

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
31891	positive	3.5-5 µm	0.6-0.9 µm	rod-shaped

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
31891	positive	growth	20-45
31891	positive	optimum	30	mesophilic
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
31891	positive	optimum	7.2
31891	positive	growth	6.5-8

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
15443	anaerobe
31891	anaerobe

Spore formation

31891

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31891	NaCl	positive	growth	0-1 %
31891	NaCl	positive	optimum	0.5 %

Observation

67770

Observationquinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31891	28757 ChEBI	fructose	+	carbon source
31891	33984 ChEBI	fucose	+	carbon source
31891	28260 ChEBI	galactose	+	carbon source
31891	24175 ChEBI	galacturonate	+	carbon source
31891	17234 ChEBI	glucose	+	carbon source
31891	17306 ChEBI	maltose	+	carbon source
31891	37684 ChEBI	mannose	+	carbon source
31891	26546 ChEBI	rhamnose	+	carbon source
31891	17992 ChEBI	sucrose	+	carbon source
31891	27082 ChEBI	trehalose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
31891	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
31891	35581 ChEBI	indole	+

Enzymes

@ref	Value	Activity
31891	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
15443	subsurface soil sample	Hyderabad	India	IND	Asia	17.3833	78.5 17.3833/78.5
67770	Subsurface soil sample

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15443	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15443	Clostridium nitrophenolicum partial 16S rRNA gene, type strain 1DT	AM261414	1461		382954

GC content

@ref	GC-content (mol%)	Method
31891	35.5
67770	35.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium nitrophenolicum sp. nov., a novel anaerobic p-nitrophenol-degrading bacterium, isolated from a subsurface soil sample.	Suresh K, Prakash D, Rastogi N, Jain RK	Int J Syst Evol Microbiol	10.1099/ijs.0.64604-0	2007

References

#15443	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21057
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28150	IJSEM 1886 2007 ( DOI 10.1099/ijs.0.64604-0 , PubMed 17684276 )
#31891	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28150
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium nitrophenolicum (DSM 21057, JCM 14030, MTCC 7832)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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