[Ref.: #5347] |
Sample type/isolated from |
soil under a pile of rotting wood chips |
[Ref.: #5347] |
Geographic location (country and/or sea, region) |
Massachusetts, Amherst |
[Ref.: #5347] |
Country |
USA |
[Ref.: #5347] |
Country ISO 3 Code |
USA |
[Ref.: #5347] |
Continent |
North America |
* marker position based on {}
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Isolation sources categories |
#Environmental |
#Terrestrial |
#Soil |
#Host |
#Plants |
#Decomposing plant |
#Host Body Product |
#Plant |
#Timber |
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #5347] |
Clostridium hungatei partial 16S rRNA gene, type strain DSM 14427T, clone 1 |
FR749966 |
1653 |
|
48256 tax ID |
[Ref.: #5347] |
Clostridium hungatei partial 16S rRNA gene, type strain DSM 14427T, clone 2 |
FR749967 |
1650 |
|
48256 tax ID |
[Ref.: #5347] |
Clostridium hungatei partial 16S rRNA gene, type strain DSM 14427T, clone 3 |
FR749968 |
1623 |
|
48256 tax ID |
[Ref.: #5347] |
Clostridium hungatei partial 16S rRNA gene, type strain DSM 14427T, clone 4 |
FR749969 |
1654 |
|
48256 tax ID |
[Ref.: #5347] |
Clostridium hungatei partial 16S rRNA gene, type strain DSM 14427T, clone 5 |
FR749970 |
1654 |
|
48256 tax ID |
[Ref.: #20218] |
Clostridium hungatei strain AD 16S ribosomal RNA gene, partial sequence |
AF020429 |
1460 |
|
48256 tax ID |
* |
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Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Ruminiclostridium hungatei DSM 14427 |
GCA_002051585 |
contig |
|
48256 tax ID |
* |
[Ref.: #66792] |
[Clostridium] hungatei strain DSM 14427 |
48256.3 |
wgs |
|
48256 tax ID |
* |
[Ref.: #66792] |
Ruminiclostridium hungatei DSM 14427 |
2711768659 |
draft |
|
48256 tax ID |
* |
|
[Ref.: #5347] |
GC-content |
40 mol% |
thermal denaturation, midpoint method (Tm) |
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Availability in culture collections External links
[Ref.: #5347] |
Culture collection no. |
DSM 14427, ATCC 700212 |
[Ref.: #72329] |
SI-ID 43828
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Genetics |
First Insights into the Genome Sequence of the Cellulolytic Bacterium Clostridium hungatei DSM 14427. |
Poehlein A, Funkner K, Schuler MA, Daniel R |
Genome Announc |
10.1128/genomeA.00363-17 |
2017 |
* |
Phylogeny |
Clostridium hungatei sp. nov., a mesophilic, N2-fixing cellulolytic bacterium isolated from soil. |
Monserrate E, Leschine SB, Canale-Parola E |
Int J Syst Evol Microbiol |
10.1099/00207713-51-1-123 |
2001 |
* |
|
- References
-
#5347 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 14427
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#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
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#72329 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID43828.1 )
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- * These data were automatically processed and therefore are not curated
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