Name: Clostridium tertium 795
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2724

Type strain:

Species: Clostridium tertium

Strain Designation: 795

Culture col. no.: DSM 2485, ATCC 14573, IAM 14196, NCIB 10697, JCM 6289, CCUG 4219, NBRC 103192, NCIMB 10697, NCIMB 541

Strain history: T. Mitsuoka <-- ATCC 14573 <-- J. D. MacLennan <-- L. McClung <-- R. Spray.

NCBI tax ID(s): 1559 (species)

SI-ID 265725

ATCC 14573, DSM 2485, IAM 14196, NCIB 10697, JCM 6289, NCIMB 10697, KCTC 5181, NBRC 103192

Special Collections

Other strains from Clostridium tertium

Section

Clostridium tertium 795 is an anaerobe, spore-forming human pathogen of the family Clostridiaceae.

spore-forming
anaerobe
human pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium tertium**
	Full Scientific Name (LPSN)	Clostridium tertium (Henry 1917) Bergey et al. 1923 (Approved Lists 1980)

Synonym

"Bacillus tertius"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1094]

Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

[Ref.: #1094]

Culture medium growth

[Ref.: #1094]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1094]

Culture medium composition

expand / minimize

[Ref.: #1094]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #1094]

Culture medium growth

[Ref.: #1094]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1094]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1094]			growth	37 °C
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1094]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence Y18174 (>99% sequence identity) for Clostridium tertium from Microbeatlas

Aquatic Samples	386
Soil Samples	574
Animal Samples	6806
Plant Samples	46
Total Samples	7812

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1094]	Pathogenicity (human)	yes
[Ref.: #1094]	Pathogenicity (animal)	yes
[Ref.: #1094]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1094]	Clostridium tertium 16S rRNA gene, partial, strain DSM 2485	Y18174	1479	GenBank ENA	1559 tax ID
[Ref.: #20218]	Clostridium tertium (ATCC 14573) 16S rRNA gene	AJ245413	1415	GenBank ENA	1559 tax ID	*
[Ref.: #20218]	Clostridium tertium strain DSM 2485 16S ribosomal RNA gene, partial sequence	HM245930	842	GenBank ENA	1559 tax ID	*
[Ref.: #20218]	Clostridium tertium gene for 16S ribosomal RNA, partial cds, strain: JCM 6289	AB618789	1477	GenBank ENA	1559 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Clostridium tertium DSM 2485	GCA_017873245	contig	GenBank ENA	1559 tax ID	*
[Ref.: #66792]	Clostridium tertium strain DSM 2485	1559.80	wgs	PATRIC	1559 tax ID	*
[Ref.: #66792]	Clostridium tertium DSM 2485	2913329792	draft	JGI IMG/M	1559 tax ID	*

[Ref.: #1094]	GC-content	28.0 mol%
[Ref.: #67770]	GC-content	24 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Clostridium tertium strain DSM 2485 PATRIC: 1559.80
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	65.98	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	84.42	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	80.693	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.099	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.393	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	76.814	no

Availability in culture collections External links

[Ref.: #1094]

Culture collection no.

DSM 2485, ATCC 14573, IAM 14196, NCIB 10697, JCM 6289, CCUG 4219, NBRC 103192, NCIMB 10697, NCIMB 541

[Ref.: #72252]

SI-ID 265725

References

#1094

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2485

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72252

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265725.1 )

* These data were automatically processed and therefore are not curated

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Clostridium tertium strain DSM 2485

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