Clostridium pasteurianum (DSM 525, ATCC 6013, IMG 1584b)

Name: Clostridium pasteurianum (DSM 525, ATCC 6013, IMG 1584b)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2626

Type strain

Strain Designation McClung 2300, 5

Culture col. no. DSM 525 ATCC 6013 IMG 1584b McClung 2300 NCIMB 9486 10 more

NCBI tax ID(s) 1262449 1501

Special Collections DSMZ CCUG JCM KCTC Literature strains

History DSMZ <- Institut für Mikrobiologie, Universität Göttingen (IMG), Germany; IMG 1584b <- ATCC <- E. McCoy, Universityof Wisconsin, Departments of Biochemistry and Agricultural Bacteriology, Madison, USA; 5 <- S. Winogradsky, University of Saint Petersburg, Russia JCM <-- ATCC 6013 <-- E. McCoy 5 <-- S. Winogradsky (L. S. McClung 2300).

Links

Clostridium pasteurianum McClung 2300 is an anaerobe bacterium that produces polysaccharides.

polysaccharide production anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 44729

LMG 3285,ATCC 6013,CECT 377,DSM 525,LMG 5709,NCIB 9486,VKM B-1774,CCUG 31328,JCM 1408,CCRC 10942,KCTC 1674,NCIMB 9486,NCDO1845,NCFB 1845,IMET 11346,CCT 0203,BCRC 10942,JCM 1108

@ref 20215

Last LPSN update 2026-05-29 08:25:31

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium pasteurianum

Full scientific name Clostridium pasteurianum Winogradsky 1895 (Approved Lists 1980)

BacDive ID	Other strains from **Clostridium pasteurianum** (3)	Type strain
2627	C. pasteurianum Donker, DSM 526, IMG 1584
2628	C. pasteurianum DSM 9989, VKM B-86
174397	C. pasteurianum R525, DSM 117789

Morphology

Colony morphology

50524

Incubation period1 day

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
123	CLOSTRIDIUM SP. MEDIUM (DSMZ Medium 54b)		Medium recipe at MediaDive	Name: CLOSTRIDIUM SP. MEDIUM (DSMZ Medium 54b) Composition: CaCO3 20.0 g/l Glucose 20.0 g/l Agar 17.0 g/l (optional) Yeast extract 10.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
123	positive	growth	37
22908	positive	maximum	45
22908	positive	minimum	25
22908	positive	growth	32
50524	positive	growth	37
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH
22908	positive	maximum	7.8
22908	positive	minimum	4.7
22908	positive	optimum	7

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
123	anaerobe
50524	anaerobe
125439	facultative anaerobe	98.298

Spore formation

@ref	Spore formation	Confidence
125439		92.304

Compound production

@ref	Compound
123	D gluconate dehydratase
123	granulose phosphorylase
123	hydrogenase
123	invertase
123	ß ketothiolase
123	1 phosphofructokinase
123	sorbitol-6-phosphate dehydrogenase
123	ferredoxin
123	flavodoxin
123	2-keto-3-D gluconate
123	polysaccharides
123	rubredoxin
123	squalene
123	restriction endonuclease ThaI

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
22908	17057 ChEBI	cellobiose	+	growth
22908	16899 ChEBI	D-mannitol	+	growth
22908	63150 ChEBI	D-rhamnose	+	growth
22908	17924 ChEBI	D-sorbitol	+	growth
22908	65327 ChEBI	D-xylose	+	growth
22908	17754 ChEBI	glycerol	+	growth
22908	30849 ChEBI	L-arabinose	+	growth
22908	17716 ChEBI	lactose	+	growth
22908	6731 ChEBI	melezitose	+	growth
22908	17814 ChEBI	salicin	+	growth
22908	27082 ChEBI	trehalose	+	growth

Enzymes

@ref	Value	Activity	Ec
22908	acid phosphatase	-	3.1.3.2
22908	alkaline phosphatase	-	3.1.3.1
22908	alpha-galactosidase	-	3.2.1.22
22908	beta-galactosidase	-	3.2.1.23
22908	beta-glucosidase	-	3.2.1.21
22908	glutamate decarboxylase	-	4.1.1.15

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	vitamin K metabolism	100	5 of 5
66794	suberin monomers biosynthesis	100	2 of 2
66794	gluconeogenesis	100	8 of 8
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	butanoate fermentation	100	4 of 4
66794	sulfopterin metabolism	100	4 of 4
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	adipate degradation	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	ceramide biosynthesis	100	1 of 1
66794	methylglyoxal degradation	100	5 of 5
66794	cardiolipin biosynthesis	100	7 of 7
66794	L-lactaldehyde degradation	100	3 of 3
66794	ppGpp biosynthesis	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	aminopropanol phosphate biosynthesis	100	2 of 2
66794	aspartate and asparagine metabolism	100	9 of 9
66794	palmitate biosynthesis	100	22 of 22
66794	coenzyme A metabolism	100	4 of 4
66794	alanine metabolism	93.1	27 of 29
66794	vitamin B1 metabolism	92.31	12 of 13
66794	threonine metabolism	90	9 of 10
66794	valine metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	NAD metabolism	88.89	16 of 18
66794	chorismate metabolism	88.89	8 of 9
66794	degradation of sugar alcohols	87.5	14 of 16
66794	isoleucine metabolism	87.5	7 of 8
66794	propanol degradation	85.71	6 of 7
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	vitamin B12 metabolism	85.29	29 of 34
66794	phenylalanine metabolism	84.62	11 of 13
66794	pyrimidine metabolism	82.22	37 of 45
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	hydrogen production	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	Entner Doudoroff pathway	80	8 of 10
66794	glycine betaine biosynthesis	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	purine metabolism	78.72	74 of 94
66794	heme metabolism	78.57	11 of 14
66794	photosynthesis	78.57	11 of 14
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	methionine metabolism	76.92	20 of 26
66794	ketogluconate metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	biotin biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	myo-inositol biosynthesis	70	7 of 10
66794	urea cycle	69.23	9 of 13
66794	histidine metabolism	68.97	20 of 29
66794	non-pathway related	68.42	26 of 38
66794	methane metabolism	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	cyanate degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	lipid metabolism	64.52	20 of 31
66794	oxidative phosphorylation	63.74	58 of 91
66794	pentose phosphate pathway	63.64	7 of 11
66794	d-xylose degradation	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	leucine metabolism	61.54	8 of 13
66794	phosphatidylethanolamine bioynthesis	61.54	8 of 13
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	cellulose degradation	60	3 of 5
66794	3-chlorocatechol degradation	60	3 of 5
66794	starch degradation	60	6 of 10
66794	lipoate biosynthesis	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	glutathione metabolism	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	d-mannose degradation	55.56	5 of 9
66794	nitrate assimilation	55.56	5 of 9
66794	tryptophan metabolism	55.26	21 of 38
66794	lysine metabolism	54.76	23 of 42
66794	metabolism of disaccharids	54.55	6 of 11
66794	proline metabolism	54.55	6 of 11
66794	arginine metabolism	54.17	13 of 24
66794	sulfate reduction	53.85	7 of 13
66794	lactate fermentation	50	2 of 4
66794	tyrosine metabolism	50	7 of 14
66794	ribulose monophosphate pathway	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	pantothenate biosynthesis	50	3 of 6
66794	phenylmercury acetate degradation	50	1 of 2
66794	toluene degradation	50	2 of 4
66794	CMP-KDO biosynthesis	50	2 of 4
66794	glycine metabolism	50	5 of 10
66794	ascorbate metabolism	45.45	10 of 22
66794	degradation of sugar acids	44	11 of 25
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	coenzyme M biosynthesis	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	degradation of pentoses	39.29	11 of 28
66794	polyamine pathway	39.13	9 of 23
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	carnitine metabolism	37.5	3 of 8
66794	4-hydroxymandelate degradation	33.33	3 of 9
66794	sulfoquinovose degradation	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	lipid A biosynthesis	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	3-phenylpropionate degradation	33.33	5 of 15
66794	sphingosine metabolism	33.33	2 of 6
66794	androgen and estrogen metabolism	31.25	5 of 16
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	phenol degradation	30	6 of 20
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	vitamin B6 metabolism	27.27	3 of 11
66794	cyclohexanol degradation	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12
66794	allantoin degradation	22.22	2 of 9

Isolation, sampling and environmental information

Isolation

@ref	Country	Country ISO 3 Code	Continent
123	Russia	RUS	Europe

Taxonmaps

69479

Global distribution of 16S sequence FR870440 (>99% sequence identity) for Clostridium pasteurianum from Microbeatlas

Aquatic Samples	2719
Soil Samples	4701
Animal Samples	2637
Plant Samples	859
Total Samples	10916

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
123	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Clostridium pasteurianum ATCC6013	complete			2600254951	1262449	99.16
66792	ASM80725v1 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013	complete	GCA_000807255	1262449.8	2627853721	1262449	98.46
66792	ASM80717v1 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013	complete	GCA_000807175	1262449.7	2627854235	1262449	98.46
66792	ASM185669v1 assembly for Clostridium pasteurianum M150B	complete	GCA_001856695	1501.9	2721755542	1501	98.46
66792	ASM185664v1 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013	complete	GCA_001856645	1262449.10		1262449	98.12
67770	ASM72420v3 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013	contig	GCA_000724205	1262449.5	2585427701	1262449	77.43
67770	Cpasteurianum_V1 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013	contig	GCA_000330945	1262449.3	2531839097	1262449	71.37

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	{16S/23S ribosomal DNA spacer region} [Clostridium pasteurianum, DSM 525, Genomic, 275 nt]	S51966	275	1501
123	Clostridium pasteurianum strain DSM 525 16S ribosomal RNA gene, partial sequence	DQ911268	320	1262449
67770	Clostridium pasteurianum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1408	AB536773	1468	1262449
67770	Clostridium pasteurianum partial 16S rRNA gene, type strain CECT 377T	FR870440	1491	1262449
67770	C.pasteurianum small subunit ribosomal RNA	M23930	1511	1501

GC content

@ref	GC-content (mol%)	Method
22908	26-28	high performance liquid chromatography (HPLC)
123	29.8	sequence analysis
67770	26	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM80717v1 assembly for Clostridium pasteurianum DSM 525 = ATCC 6013
BV-BRC: 1262449.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	98.30	no
125439	gram_stain	BacteriaNetⓘ	positive	53.24	no
125439	motility	BacteriaNetⓘ	yes	82.66	no
125439	spore_formation	BacteriaNetⓘ	yes	92.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Clostridium pasteurianum DSM 525 = ATCC 6013 ATCC 6013
NCBI: GCA_001856645.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	65.24	no
125438	anaerobic	anaerobicⓘ	yes	82.90	yes
125438	aerobic	aerobicⓘ	no	87.29	no
125438	spore-forming	spore-formingⓘ	yes	77.06	no
125438	thermophilic	thermophileⓘ	no	89.49	no
125438	flagellated	motile2+ⓘ	yes	77.83	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Rational comparison of biohydrogen production using Clostridium species through dark fermentation during anaerobic batch processes.	Vauthier L, Rondags E, Loubiere C, Pen N, Framboisier X, Guedon E, Delaunay S.	J Biotechnol	10.1016/j.jbiotec.2025.10.009	2026
Cultivation	Defined and refined: development of a minimal medium for Clostridium pasteurianum.	Nadal Alemany N, Verboon DC, Kleerebezem R, Gonzalez-Cabaleiro R.	Appl Microbiol Biotechnol	10.1007/s00253-025-13572-5	2025
	An acid-tolerant Clostridium sp. BLY-1 strain with high biohydrogen production rate.	Li L, Xie Z, Ning J, Zhang Y, Sang Y, Zhang L, Liu F.	Bioresour Technol	10.1016/j.biortech.2024.131227	2024
Genetics	A Consecutive Genome Engineering Method Reveals a New Phenotype and Regulation of Glucose and Glycerol Utilization in Clostridium Pasteurianum.	Nguyen T, Meleski LWG, Belavatta MP, Gurumoorthi S, Zhang C, Heins AL, Zeng AP.	Eng Life Sci	10.1002/elsc.202400026	2025
	Heterologous 1,3-Propanediol Production Using Different Recombinant Clostridium beijerinckii DSM 6423 Strains.	Schoch T, Baur T, Kunz J, Stoferle S, Durre P.	Microorganisms	10.3390/microorganisms11030784	2023
Enzymology	A (S)-3-Hydroxybutyrate Dehydrogenase Belonging to the 3-Hydroxyacyl-CoA Dehydrogenase Family Facilitates Hydroxyacid Degradation in Anaerobic Bacteria.	Zhou Y, Wei Y, Jiang L, Zhang Y, Jiao X.	Appl Environ Microbiol	10.1128/aem.00366-23	2023
	Application of exogenous electron mediator in fermentation to enhance the production of value-added products.	Yu Y, Shi Z, Li W, Bian M, Cheng C, Xi Y, Yao S, Zeng X, Jia Y.	Appl Environ Microbiol	10.1128/aem.00495-25	2025
Enzymology	Unveiling 14 novel 2-hydroxy acid racemization and epimerization reactions in the lactate racemase superfamily.	Urdiain-Arraiza J, Vandenberghe A, Dimitrova G, Desguin B.	J Biol Chem	10.1016/j.jbc.2024.108069	2025
Genetics	Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations.	Scott WT, Rockx S, Marien Q, Regueira A, Candry P, Ganigue R, Koehorst JJ, Schaap PJ.	Comput Struct Biotechnol J	10.1016/j.csbj.2025.01.013	2025
Metabolism	Sustainable Production of Biofuels and Biochemicals via Electro-Fermentation Technology.	Salar-Garcia MJ, Ortiz-Martinez VM, Sanchez-Segado S, Valero Sanchez R, Saez Lopez A, Lozano Blanco LJ, Godinez-Seoane C.	Molecules	10.3390/molecules29040834	2024
	Improving gene transfer in Clostridium pasteurianum through the isolation of rare hypertransformable variants.	Grosse-Honebrink A, Schwarz KM, Wang H, Minton NP, Zhang Y.	Anaerobe	10.1016/j.anaerobe.2017.09.001	2017
	The Restriction-Modification Systems of Clostridium carboxidivorans P7.	Kottenhahn P, Philipps G, Bunk B, Sproer C, Jennewein S.	Microorganisms	10.3390/microorganisms11122962	2023
Metabolism	Control of redox potential in a novel continuous bioelectrochemical system led to remarkable metabolic and energetic responses of Clostridium pasteurianum grown on glycerol.	Arbter P, Widderich N, Utesch T, Hong Y, Zeng AP.	Microb Cell Fact	10.1186/s12934-022-01902-5	2022
Metabolism	Improved electrocompetence and metabolic engineering of Clostridium pasteurianum reveals a new regulation pattern of glycerol fermentation.	Schmitz R, Sabra W, Arbter P, Hong Y, Utesch T, Zeng AP.	Eng Life Sci	10.1002/elsc.201800118	2019
Metabolism	Metabolomic and kinetic investigations on the electricity-aided production of butanol by Clostridium pasteurianum strains.	Arbter P, Sabra W, Utesch T, Hong Y, Zeng AP.	Eng Life Sci	10.1002/elsc.202000035	2021
	Quantitative Bioreactor Monitoring of Intracellular Bacterial Metabolites in Clostridium autoethanogenum Using Liquid Chromatography-Isotope Dilution Mass Spectrometry.	Safo L, Abdelrazig S, Grosse-Honebrink A, Millat T, Henstra AM, Norman R, Thomas NR, Winzer K, Minton NP, Kim DH, Barrett DA.	ACS Omega	10.1021/acsomega.0c05588	2021
Enzymology	Degradation of the low-calorie sugar substitute 5-ketofructose by different bacteria.	Schiessl J, Kosciow K, Garschagen LS, Hoffmann JJ, Heymuth J, Franke T, Deppenmeier U.	Appl Microbiol Biotechnol	10.1007/s00253-021-11168-3	2021
	Draft Genome Sequence of Clostridium pasteurianum NRRL B-598, a Potential Butanol or Hydrogen Producer.	Kolek J, Sedlar K, Provaznik I, Patakova P.	Genome Announc	10.1128/genomea.00192-14	2014
	Developing a genetic engineering method for Acetobacterium wieringae to expand one-carbon valorization pathways.	Moreira JPC, Heap JT, Alves JI, Domingues L.	Biotechnol Biofuels Bioprod	10.1186/s13068-023-02259-6	2023
Metabolism	Towards improved butanol production through targeted genetic modification of Clostridium pasteurianum.	Schwarz KM, Grosse-Honebrink A, Derecka K, Rotta C, Zhang Y, Minton NP.	Metab Eng	10.1016/j.ymben.2017.01.009	2017
	Microbial electro-fermentation for synthesis of chemicals and biofuels driven by bi-directional extracellular electron transfer.	Gong Z, Yu H, Zhang J, Li F, Song H.	Synth Syst Biotechnol	10.1016/j.synbio.2020.08.004	2020
Metabolism	Cooperative growth of Geobacter sulfurreducens and Clostridium pasteurianum with subsequent metabolic shift in glycerol fermentation.	Moscoviz R, de Fouchecour F, Santa-Catalina G, Bernet N, Trably E.	Sci Rep	10.1038/srep44334	2017
Biotechnology	Microbiomes of biohydrogen production from dark fermentation of industrial wastes: current trends, advanced tools and future outlook.	Dzulkarnain ELN, Audu JO, Wan Dagang WRZ, Abdul-Wahab MF.	Bioresour Bioprocess	10.1186/s40643-022-00504-8	2022
Transcriptome	Bacterial Tolerance to 1-Butanol and 2-Butanol: Quantitative Assessment and Transcriptomic Response.	Arsov A, Petrova P, Gerginova M, Tsigoriyna L, Armenova N, Ignatova I, Petrov K.	Int J Mol Sci	10.3390/ijms252413336	2024
	Dam and Dcm methylations prevent gene transfer into Clostridium pasteurianum NRRL B-598: development of methods for electrotransformation, conjugation, and sonoporation.	Kolek J, Sedlar K, Provaznik I, Patakova P.	Biotechnol Biofuels	10.1186/s13068-016-0436-y	2016
	Comprehensive investigations of biobutanol production by a non-acetone and 1,3-propanediol generating Clostridium strain from glycerol and polysaccharides.	Xin F, Wang C, Dong W, Zhang W, Wu H, Ma J, Jiang M.	Biotechnol Biofuels	10.1186/s13068-016-0641-8	2016
	Bio-butanol production from glycerol with Clostridium pasteurianum CH4: the effects of butyrate addition and in situ butanol removal via membrane distillation.	Lin DS, Yen HW, Kao WC, Cheng CL, Chen WM, Huang CC, Chang JS.	Biotechnol Biofuels	10.1186/s13068-015-0352-6	2015
Metabolism	Genome-directed analysis of prophage excision, host defence systems, and central fermentative metabolism in Clostridium pasteurianum.	Pyne ME, Liu X, Moo-Young M, Chung DA, Chou CP.	Sci Rep	10.1038/srep26228	2016
Enzymology	The Physiological Functions and Structural Determinants of Catalytic Bias in the [FeFe]-Hydrogenases CpI and CpII of Clostridium pasteurianum Strain W5.	Therien JB, Artz JH, Poudel S, Hamilton TL, Liu Z, Noone SM, Adams MWW, King PW, Bryant DA, Boyd ES, Peters JW.	Front Microbiol	10.3389/fmicb.2017.01305	2017
Metabolism	Fermentation of mixed substrates by Clostridium pasteurianum and its physiological, metabolic and proteomic characterizations.	Sabra W, Wang W, Surandram S, Groeger C, Zeng AP.	Microb Cell Fact	10.1186/s12934-016-0497-4	2016
	Antimicrobial Potential of the Genera Geobacillus and Parageobacillus, as Well as Endolysins Biosynthesized by Their Bacteriophages.	Zebrowska J, Witkowska M, Struck A, Laszuk PE, Raczuk E, Ponikowska M, Skowron PM, Zylicz-Stachula A.	Antibiotics (Basel)	10.3390/antibiotics11020242	2022
	A comprehensive review of microbial fuel cells considering materials, methods, structures, and microorganisms.	Jalili P, Ala A, Nazari P, Jalili B, Ganji DD.	Heliyon	10.1016/j.heliyon.2024.e25439	2024
Metabolism	Changes in membrane plasmalogens of Clostridium pasteurianum during butanol fermentation as determined by lipidomic analysis.	Kolek J, Patakova P, Melzoch K, Sigler K, Rezanka T.	PLoS One	10.1371/journal.pone.0122058	2015
	Replacement of l-Amino Acids by d-Amino Acids in the Antimicrobial Peptide Ranalexin and Its Consequences for Antimicrobial Activity and Biodistribution.	Domhan C, Uhl P, Kleist C, Zimmermann S, Umstatter F, Leotta K, Mier W, Wink M.	Molecules	10.3390/molecules24162987	2019
Phylogeny	Isolation and Characterization of a Bacteriocin-Like Substance Produced by Geobacillus toebii Strain HBB-247.	Basbulbul Ozdemir G, Biyik HH.	Indian J Microbiol	10.1007/s12088-011-0227-x	2012
	Tequila vinasses acidogenesis in a UASB reactor with Clostridium predominance.	Marino-Marmolejo EN, Corbala-Robles L, Cortez-Aguilar RC, Contreras-Ramos SM, Bolanos-Rosales RE, Davila-Vazquez G.	Springerplus	10.1186/s40064-015-1193-2	2015
Metabolism	Disruption of the Reductive 1,3-Propanediol Pathway Triggers Production of 1,2-Propanediol for Sustained Glycerol Fermentation by Clostridium pasteurianum.	Pyne ME, Sokolenko S, Liu X, Srirangan K, Bruder MR, Aucoin MG, Moo-Young M, Chung DA, Chou CP.	Appl Environ Microbiol	10.1128/aem.01354-16	2016
	Comparative Genomic Analysis of Soil Dwelling Bacteria Utilizing a Combinational Codon Usage and Molecular Phylogenetic Approach Accentuating on Key Housekeeping Genes.	Saha J, Saha BK, Pal Sarkar M, Roy V, Mandal P, Pal A.	Front Microbiol	10.3389/fmicb.2019.02896	2019
Genetics	High Diversity and Functional Potential of Undescribed "Acidobacteriota" in Danish Wastewater Treatment Plants.	Kristensen JM, Singleton C, Clegg LA, Petriglieri F, Nielsen PH.	Front Microbiol	10.3389/fmicb.2021.643950	2021
Metabolism	A ferredoxin-dependent dihydropyrimidine dehydrogenase in Clostridium chromiireducens.	Wang F, Wei Y, Lu Q, Ang EL, Zhao H, Zhang Y.	Biosci Rep	10.1042/bsr20201642	2020
Metabolism	Hydrogen production by Sulfurospirillum species enables syntrophic interactions of Epsilonproteobacteria.	Kruse S, Goris T, Westermann M, Adrian L, Diekert G.	Nat Commun	10.1038/s41467-018-07342-3	2018
	Biofouling Mitigation Approaches during Water Recovery from Fermented Broth via Forward Osmosis.	Kalafatakis S, Zarebska A, Lange L, Helix-Nielsen C, Skiadas IV, Gavala HN.	Membranes (Basel)	10.3390/membranes10110307	2020
	Compound-Specific Stable Isotope Analysis: Implications in Hexachlorocyclohexane in-vitro and Field Assessment.	Kohli P, Richnow HH, Lal R.	Indian J Microbiol	10.1007/s12088-016-0630-4	2017
Metabolism	Syntrophomonas wolfei Uses an NADH-Dependent, Ferredoxin-Independent [FeFe]-Hydrogenase To Reoxidize NADH.	Losey NA, Mus F, Peters JW, Le HM, McInerney MJ.	Appl Environ Microbiol	10.1128/aem.01335-17	2017
Metabolism	A Heterodimeric Reduced-Ferredoxin-Dependent Methylenetetrahydrofolate Reductase from Syngas-Fermenting Clostridium ljungdahlii.	Yi J, Huang H, Liang J, Wang R, Liu Z, Li F, Wang S.	Microbiol Spectr	10.1128/spectrum.00958-21	2021
	Redox dependent metabolic shift in Clostridium autoethanogenum by extracellular electron supply.	Kracke F, Virdis B, Bernhardt PV, Rabaey K, Kromer JO.	Biotechnol Biofuels	10.1186/s13068-016-0663-2	2016
Metabolism	A reversible electron-bifurcating ferredoxin- and NAD-dependent [FeFe]-hydrogenase (HydABC) in Moorella thermoacetica.	Wang S, Huang H, Kahnt J, Thauer RK.	J Bacteriol	10.1128/jb.02158-12	2013
Metabolism	Reduction of Flavodoxin by Electron Bifurcation and Sodium Ion-dependent Reoxidation by NAD+ Catalyzed by Ferredoxin-NAD+ Reductase (Rnf).	Chowdhury NP, Klomann K, Seubert A, Buckel W.	J Biol Chem	10.1074/jbc.m116.726299	2016
Metabolism	Evidence for a hexaheteromeric methylenetetrahydrofolate reductase in Moorella thermoacetica.	Mock J, Wang S, Huang H, Kahnt J, Thauer RK.	J Bacteriol	10.1128/jb.01839-14	2014
	Effective isopropanol-butanol (IB) fermentation with high butanol content using a newly isolated Clostridium sp. A1424.	Youn SH, Lee KM, Kim KY, Lee SM, Woo HM, Um Y.	Biotechnol Biofuels	10.1186/s13068-016-0650-7	2016
Metabolism	Metabolic engineering of a glycerol-oxidative pathway in Lactobacillus panis PM1 for utilization of bioethanol thin stillage: potential to produce platform chemicals from glycerol.	Kang TS, Korber DR, Tanaka T.	Appl Environ Microbiol	10.1128/aem.01454-14	2014
Transcriptome	A transcriptional response of Clostridium beijerinckii NRRL B-598 to a butanol shock.	Sedlar K, Kolek J, Gruber M, Jureckova K, Branska B, Csaba G, Vasylkivska M, Zimmer R, Patakova P, Provaznik I.	Biotechnol Biofuels	10.1186/s13068-019-1584-7	2019
Metabolism	Expanding the molecular toolkit for the homoacetogen Clostridium ljungdahlii.	Molitor B, Kirchner K, Henrich AW, Schmitz S, Rosenbaum MA.	Sci Rep	10.1038/srep31518	2016
Metabolism	1,3-Propanediol production from glycerol by a newly isolated Trichococcus strain.	van Gelder AH, Aydin R, Alves MM, Stams AJ.	Microb Biotechnol	10.1111/j.1751-7915.2011.00318.x	2012
Metabolism	NADP+ reduction with reduced ferredoxin and NADP+ reduction with NADH are coupled via an electron-bifurcating enzyme complex in Clostridium kluyveri.	Wang S, Huang H, Moll J, Thauer RK.	J Bacteriol	10.1128/jb.00612-10	2010
Enzymology	Clostridium pasteurianum F1Fo ATP synthase: operon, composition, and some properties.	Das A, Ljungdahl LG.	J Bacteriol	10.1128/jb.185.18.5527-5535.2003	2003
Metabolism	Transcription profiling of butanol producer Clostridium beijerinckii NRRL B-598 using RNA-Seq.	Sedlar K, Koscova P, Vasylkivska M, Branska B, Kolek J, Kupkova K, Patakova P, Provaznik I.	BMC Genomics	10.1186/s12864-018-4805-8	2018
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Phylogeny	Microbial solvent formation revisited by comparative genome analysis.	Poehlein A, Solano JDM, Flitsch SK, Krabben P, Winzer K, Reid SJ, Jones DT, Green E, Minton NP, Daniel R, Durre P.	Biotechnol Biofuels	10.1186/s13068-017-0742-z	2017
Metabolism	Energy Conservation Associated with Ethanol Formation from H2 and CO2 in Clostridium autoethanogenum Involving Electron Bifurcation.	Mock J, Zheng Y, Mueller AP, Ly S, Tran L, Segovia S, Nagaraju S, Kopke M, Durre P, Thauer RK.	J Bacteriol	10.1128/jb.00399-15	2015
Genetics	Towards continuous industrial bioprocessing with solventogenic and acetogenic clostridia: challenges, progress and perspectives.	Vees CA, Neuendorf CS, Pflugl S.	J Ind Microbiol Biotechnol	10.1007/s10295-020-02296-2	2020
Enzymology	New molecular screening tools for analysis of free-living diazotrophs in soil.	Burgmann H, Widmer F, Von Sigler W, Zeyer J.	Appl Environ Microbiol	10.1128/aem.70.1.240-247.2004	2004
Metabolism	Hydrogen formation and its regulation in Ruminococcus albus: involvement of an electron-bifurcating [FeFe]-hydrogenase, of a non-electron-bifurcating [FeFe]-hydrogenase, and of a putative hydrogen-sensing [FeFe]-hydrogenase.	Zheng Y, Kahnt J, Kwon IH, Mackie RI, Thauer RK.	J Bacteriol	10.1128/jb.02070-14	2014
Metabolism	NADP-specific electron-bifurcating [FeFe]-hydrogenase in a functional complex with formate dehydrogenase in Clostridium autoethanogenum grown on CO.	Wang S, Huang H, Kahnt J, Mueller AP, Kopke M, Thauer RK.	J Bacteriol	10.1128/jb.00678-13	2013
Phylogeny	Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed.	Smalla K, Wieland G, Buchner A, Zock A, Parzy J, Kaiser S, Roskot N, Heuer H, Berg G.	Appl Environ Microbiol	10.1128/aem.67.10.4742-4751.2001	2001
Metabolism	Electron bifurcation involved in the energy metabolism of the acetogenic bacterium Moorella thermoacetica growing on glucose or H2 plus CO2.	Huang H, Wang S, Moll J, Thauer RK.	J Bacteriol	10.1128/jb.00385-12	2012
Metabolism	Studies on the mechanism of electron bifurcation catalyzed by electron transferring flavoprotein (Etf) and butyryl-CoA dehydrogenase (Bcd) of Acidaminococcus fermentans.	Chowdhury NP, Mowafy AM, Demmer JK, Upadhyay V, Koelzer S, Jayamani E, Kahnt J, Hornung M, Demmer U, Ermler U, Buckel W.	J Biol Chem	10.1074/jbc.m113.521013	2014
Metabolism	Coupled ferredoxin and crotonyl coenzyme A (CoA) reduction with NADH catalyzed by the butyryl-CoA dehydrogenase/Etf complex from Clostridium kluyveri.	Li F, Hinderberger J, Seedorf H, Zhang J, Buckel W, Thauer RK.	J Bacteriol	10.1128/jb.01417-07	2008
Enzymology	Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients.	Heuer H, Krsek M, Baker P, Smalla K, Wellington EM.	Appl Environ Microbiol	10.1128/aem.63.8.3233-3241.1997	1997
Enzymology	Effects of T4 lysozyme release from transgenic potato roots on bacterial rhizosphere communities are negligible relative to natural factors.	Heuer H, Kroppenstedt RM, Lottmann J, Berg G, Smalla K.	Appl Environ Microbiol	10.1128/aem.68.3.1325-1335.2002	2002
Metabolism	Constructing and testing the thermodynamic limits of synthetic NAD(P)H:H2 pathways.	Veit A, Akhtar MK, Mizutani T, Jones PR.	Microb Biotechnol	10.1111/j.1751-7915.2008.00033.x	2008
Transcriptome	Transcriptomic characterization of recombinant Clostridium beijerinckii NCIMB 8052 expressing methylglyoxal synthase and glyoxal reductase from Clostridium pasteurianum ATCC 6013.	Kumar S, Agyeman-Duah E, Awaga-Cromwell MM, Ujor VC.	Appl Environ Microbiol	10.1128/aem.01012-24	2024
	Single and multiplexed gene repression in solventogenic Clostridium via Cas12a-based CRISPR interference.	Joseph RC, Sandoval NR.	Synth Syst Biotechnol	10.1016/j.synbio.2022.12.005	2023
Phylogeny	Phylogenomics and genetic analysis of solvent-producing Clostridium species.	Jensen RO, Schulz F, Roux S, Klingeman DM, Mitchell WP, Udwary D, Morais S, Reynoso V, Winkler J, Nagaraju S, De Tissera S, Shapiro N, Ivanova N, Reddy TBK, Mizrahi I, Utturkar SM, Bayer EA, Woyke T, Mouncey NJ, Jewett MC, Simpson SD, Kopke M, Jones DT, Brown SD.	Sci Data	10.1038/s41597-024-03210-6	2024
Genetics	A Case Study into Microbial Genome Assembly Gap Sequences and Finishing Strategies.	Utturkar SM, Klingeman DM, Hurt RA, Brown SD.	Front Microbiol	10.3389/fmicb.2017.01272	2017
	Expansion of the genetic toolkit for metabolic engineering of Clostridium pasteurianum: chromosomal gene disruption of the endogenous CpaAI restriction enzyme.	Pyne ME, Moo-Young M, Chung DA, Chou CP.	Biotechnol Biofuels	10.1186/s13068-014-0163-1	2014
	Harnessing heterologous and endogenous CRISPR-Cas machineries for efficient markerless genome editing in Clostridium.	Pyne ME, Bruder MR, Moo-Young M, Chung DA, Chou CP.	Sci Rep	10.1038/srep25666	2016
Metabolism	Metabolic and proteomic analyses of product selectivity and redox regulation in Clostridium pasteurianum grown on glycerol under varied iron availability.	Groeger C, Wang W, Sabra W, Utesch T, Zeng AP.	Microb Cell Fact	10.1186/s12934-017-0678-9	2017
Enzymology	Metabolic engineering of Clostridium beijerinckii to improve glycerol metabolism and furfural tolerance.	Agu CV, Ujor V, Ezeji TC.	Biotechnol Biofuels	10.1186/s13068-019-1388-9	2019
Metabolism	Sugar uptake by the solventogenic clostridia.	Mitchell WJ.	World J Microbiol Biotechnol	10.1007/s11274-015-1981-4	2016
Metabolism	Nitrogen Fixation in Pozol, a Traditional Fermented Beverage.	Rizo J, Rogel MA, Guillen D, Wacher C, Martinez-Romero E, Encarnacion S, Sanchez S, Rodriguez-Sanoja R.	Appl Environ Microbiol	10.1128/aem.00588-20	2020
	Impurities of crude glycerol and their effect on metabolite production.	Samul D, Leja K, Grajek W.	Ann Microbiol	10.1007/s13213-013-0767-x	2014
	Flow cytometry analysis of Clostridium beijerinckii NRRL B-598 populations exhibiting different phenotypes induced by changes in cultivation conditions.	Branska B, Pechacova Z, Kolek J, Vasylkivska M, Patakova P.	Biotechnol Biofuels	10.1186/s13068-018-1096-x	2018
	Apertures in the Clostridium sporogenes spore coat and exosporium align to facilitate emergence of the vegetative cell.	Brunt J, Cross KL, Peck MW.	Food Microbiol	10.1016/j.fm.2015.04.013	2015
	Taurine-sulfur assimilation and taurine-pyruvate aminotransferase activity in anaerobic bacteria.	Chien C, Leadbetter ER, Godchaux W.	Appl Environ Microbiol	10.1128/aem.63.8.3021-3024.1997	1997
Metabolism	Adaptability of Klebsiella pneumoniae 2e, a Newly Isolated 1,3-Propanediol-Producing Strain, to Crude Glycerol as Revealed by Genomic Profiling.	Ma J, Jiang H, Hector SB, Xiao Z, Li J, Liu R, Li C, Zeng B, Liu GQ, Zhu Y.	Appl Environ Microbiol	10.1128/aem.00254-19	2019
Metabolism	Development of a high-throughput assay for rapid screening of butanologenic strains.	Agu CV, Lai SM, Ujor V, Biswas PK, Jones A, Gopalan V, Ezeji TC.	Sci Rep	10.1038/s41598-017-18074-7	2018
	Zinc- and iron-rubredoxins from Clostridium pasteurianum at atomic resolution: a high-precision model of a ZnS4 coordination unit in a protein.	Dauter Z, Wilson KS, Sieker LC, Moulis JM, Meyer J.	Proc Natl Acad Sci U S A	10.1073/pnas.93.17.8836	1996
Metabolism	Scale-up of anaerobic 1,3-propanediol production by Clostridium butyricum DSP1 from crude glycerol.	Szymanowska-Powalowska D, Bialas W.	BMC Microbiol	10.1186/1471-2180-14-45	2014
Metabolism	Energy-dependent transport of nickel by Clostridium pasteurianum.	Bryson MF, Drake HL.	J Bacteriol	10.1128/jb.170.1.234-238.1988	1988
Pathogenicity	Inactivation of clostridial ferredoxin and pyruvate-ferredoxin oxidoreductase by sodium nitrite.	Carpenter CE, Reddy DS, Cornforth DP.	Appl Environ Microbiol	10.1128/aem.53.3.549-552.1987	1987
	Cloning, sequencing and expression in Escherichia coli of the rubredoxin gene from Clostridium pasteurianum.	Mathieu I, Meyer J, Moulis JM.	Biochem J	10.1042/bj2850255	1992
Metabolism	Reduced ferredoxin: CO2 oxidoreductase from Clostridium pasteurianum: its role in formate metabolism.	Thauer RK, Fuchs G, Jungermann K.	J Bacteriol	10.1128/jb.118.2.758-760.1974	1974
	Protoplast Regeneration in Clostridium tertium: Isolation of Derivatives with High-Frequency Regeneration.	Knowlton S, Ferchak JD, Alexander JK.	Appl Environ Microbiol	10.1128/aem.48.6.1246-1247.1984	1984
Enzymology	Complex N acquisition by soil diazotrophs: how the ability to release exoenzymes affects N fixation by terrestrial free-living diazotrophs.	Norman JS, Friesen ML.	ISME J	10.1038/ismej.2016.127	2017
Genetics	Solvent-Producing Clostridia Revisited.	Jones DT, Schulz F, Roux S, Brown SD.	Microorganisms	10.3390/microorganisms11092253	2023
	Stimulation of Pyrophosphatase Activity in Clostridium pasteurianum by Reductants.	D'Eustachio AJ, Knight E, Hardy RW.	J Bacteriol	10.1128/jb.90.1.288-289.1965	1965
Metabolism	Functional studies of [FeFe] hydrogenase maturation in an Escherichia coli biosynthetic system.	King PW, Posewitz MC, Ghirardi ML, Seibert M.	J Bacteriol	10.1128/jb.188.6.2163-2172.2006	2006
Metabolism	The biosynthesis of granulose by Clostridium pasteurianum.	Robson RL, Robson RM, Morris JG.	Biochem J	10.1042/bj1440503	1974
	Protoplast formation and cell wall regeneration in Clostridium perfringens.	Stal MH, Blaschek HP.	Appl Environ Microbiol	10.1128/aem.50.4.1097-1099.1985	1985
Metabolism	Detection and quantification of functional genes of cellulose- degrading, fermentative, and sulfate-reducing bacteria and methanogenic archaea.	Pereyra LP, Hiibel SR, Prieto Riquelme MV, Reardon KF, Pruden A.	Appl Environ Microbiol	10.1128/aem.01285-09	2010
	Production of Clostridium pasteurianum in a defined medium.	Sargeant K, Ford JW, Longyear VM.	Appl Microbiol	10.1128/am.16.2.296-300.1968	1968
	The sequence of the single 16S rRNA gene of the thermophilic eubacterium Rhodothermus marinus reveals a distant relationship to the group containing Flexibacter, Bacteroides, and Cytophaga species.	Andresson OS, Fridjonsson OH.	J Bacteriol	10.1128/jb.176.20.6165-6169.1994	1994
Enzymology	Purification of two Clostridium bacteriocins by procedures appropriate to hydrophobic proteins.	Clarke DJ, Robson RM, Morris JG.	Antimicrob Agents Chemother	10.1128/aac.7.3.256	1975
Metabolism	Anaerobic bacteria that dechlorinate perchloroethene.	Fathepure BZ, Nengu JP, Boyd SA.	Appl Environ Microbiol	10.1128/aem.53.11.2671-2674.1987	1987
Metabolism	Glycolytic and related enzymes in clostridial classification.	Kotze JP.	Appl Microbiol	10.1128/am.18.5.744-747.1969	1969
	Liquid chromatographic procedure for fermentation product analysis in the identification of anaerobic bacteria.	Ehrlich GG, Goerlitz DF, Bourell JH, Eisen GV, Godsy EM.	Appl Environ Microbiol	10.1128/aem.42.5.878-885.1981	1981
Metabolism	The characteristics of lactate-fermenting sporeforming anaerobes from silage.	BRYANT MP, BURKEY LA.	J Bacteriol	10.1128/jb.71.1.43-46.1956	1956
Metabolism	Hydrogenase activity and the H2-fumarate electron transport system in Bacteroides fragilis.	Harris MA, Reddy CA.	J Bacteriol	10.1128/jb.131.3.922-928.1977	1977
Enzymology	Multiple forms of bacterial hydrogenases.	Ackrell BA, Asato RN, Mower HF.	J Bacteriol	10.1128/jb.92.4.828-838.1966	1966
Metabolism	Translation of synthetic and endogenous messenger ribonucleic acid in vitro by ribosomes and polyribosomes from Clostridium pasteurianum.	Himes RH, Stallcup MR, Rabinowitz JC.	J Bacteriol	10.1128/jb.112.3.1057-1069.1972	1972
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Metabolism	Carbon monoxide oxidation by methanogenic bacteria.	Daniels L, Fuchs G, Thauer RK, Zeikus JG.	J Bacteriol	10.1128/jb.132.1.118-126.1977	1977
	Transformation of Bacillus polymyxa with plasmid DNA.	Mallonee DH, Speckman RA.	Appl Environ Microbiol	10.1128/aem.55.10.2517-2521.1989	1989
Metabolism	Protoplast formation and regeneration of dehydrodivanillin-degrading strains of Fusobacterium varium and Enterococcus faecium.	Chen W, Ohmiya K, Shimizu S.	Appl Environ Microbiol	10.1128/aem.52.4.612-616.1986	1986
Metabolism	Pyruvate metabolism in Sarcina maxima.	Kupfer DG, Canale-Parola E.	J Bacteriol	10.1128/jb.94.4.984-990.1967	1967
Enzymology	Formate dehydrogenase from Clostridium acidiurici.	Kearny JJ, Sagers RD.	J Bacteriol	10.1128/jb.109.1.152-161.1972	1972
	Physical map of the Clostridium beijerinckii (formerly Clostridium acetobutylicum) NCIMB 8052 chromosome.	Wilkinson SR, Young M.	J Bacteriol	10.1128/jb.177.2.439-448.1995	1995
Enzymology	Regulation of glutamine synthetase. II. Patterns of feedback inhibition in microorganisms.	Hubbard JS, Stadtman ER.	J Bacteriol	10.1128/jb.93.3.1045-1055.1967	1967
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	Compilation of 5S rRNA and 5S rRNA gene sequences.	Specht T, Wolters J, Erdmann VA.	Nucleic Acids Res	10.1093/nar/18.suppl.2215	1990
Phylogeny	Phylogenetic analysis of the bacterial communities in marine sediments.	Gray JP, Herwig RP.	Appl Environ Microbiol	10.1128/aem.62.11.4049-4059.1996	1996
Metabolism	Conservation of ribosomal protein binding sites in prokaryotic 16S RNAs.	Thurlow DL, Zimmermann RA.	Proc Natl Acad Sci U S A	10.1073/pnas.75.6.2859	1978
Enzymology	A four-iron, four-sulfide ferredoxin with high thermostability from Clostridium thermoaceticum.	Yang SS, Ljungdahl LG, LeGall J.	J Bacteriol	10.1128/jb.130.3.1084-1090.1977	1977
Metabolism	Enzymatic basis for assimilatory and dissimilatory sulfate reduction.	PECK HD.	J Bacteriol	10.1128/jb.82.6.933-939.1961	1961
Metabolism	Acetone-butanol fermentation revisited.	Jones DT, Woods DR.	Microbiol Rev	10.1128/mr.50.4.484-524.1986	1986
	Kinetic analysis of fermentative hydrogen production by Clostridium pasteurianum under static magnetic field.	Chen L, Wang M, Cheng L, Luan H.	AMB Express	10.1186/s13568-025-01973-8	2025
	Reconsidering the Enzyme Kinetics of [FeFe]-Hydrogenases: Improved Turnover Rates and New Insights into pH and Potential Dependence with Eu(II)-Based Solution Assays.	Sonmez E, Kostopoulos N, Gamache M, Cheah MH, Huang P, Bagnall AJ, Filmon DT, Voloshyn I, Happe T, Senger M, Plumere N, Sekretareva A, Berggren G.	Anal Chem	10.1021/acs.analchem.5c02898	2025
	A Nanobiocatalyst-Driven Hybrid System for Efficient and Sustainable Hydrogen Production via Electron Flow Optimization.	Yang L, Dong Y, Zhao D, Li X, He J, Lai TP, Zhou E, Ueki T, Li Y, Meng X, Zhang L, Yu B, Pei W, Fan Y, Gu T, Wang F, Xu D.	Adv Mater	10.1002/adma.202508613	2025
Enzymology	Mesoporous Electrodes Enhance the Electrocatalytic Performance of [FeFe]-Hydrogenase.	Webb S, Veliju A, Maroni P, Apfel UP, Happe T, Milton RD.	Angew Chem Int Ed Engl	10.1002/anie.202416658	2025
	Influence of fumarate on interspecies electron transfer and the metabolic shift induced in Clostridium pasteurianum by Geobacter sulfurreducens.	Perez-Bernal MF, Berthomieu R, Quemener ED, Bernet N, Trably E.	J Appl Microbiol	10.1093/jambio/lxae122	2024
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Enzymology	Insights into the Molecular Mechanism of Formaldehyde Inhibition of [FeFe]-Hydrogenases.	Duan J, Veliju A, Lampret O, Liu L, Yadav S, Apfel UP, Armstrong FA, Hemschemeier A, Hofmann E.	J Am Chem Soc	10.1021/jacs.3c07800	2023
Enzymology	H-cluster Intermediates and Catalytic Properties of Clostridium pasteurianum [FeFe]-Hydrogenase III.	Kisgeropoulos EC, Ratzloff MW, Stroeva-Dahl EM, Hasan S, Varghese F, Artz JH, Peters JW, Mulder DW, King PW.	Biochemistry	10.1021/acs.biochem.5c00066	2025
	Unlocking 1,3-Propanediol Production by Pseudomonas aeruginosa through Electro-Fermentation.	Narcizo JP, Guazzaroni ME, de Andrade AR, Reginatto V.	ACS Omega	10.1021/acsomega.5c05374	2025
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	Strain evolution and novel downstream processing with integrated catalysis enable highly efficient coproduction of 1,3-propanediol and organic acid esters from crude glycerol.	Zhang C, Sharma S, Ma C, Zeng AP.	Biotechnol Bioeng	10.1002/bit.28070	2022
	Enhancement of magnetic field on fermentative hydrogen production by Clostridium pasteurianum.	Chen L, Zhang K, Wang M, Zhang Z, Feng Y.	Bioresour Technol	10.1016/j.biortech.2021.125764	2021
	Probing the ferredoxin:hydrogenase electron transfer complex by infrared difference spectroscopy.	Sahin S, Brazard J, Zuchan K, Adachi TBM, Muhlenhoff U, Milton RD, Stripp ST.	Chem Sci	10.1039/d5sc00550g	2025
	Mechanisms underlying Clostridium pasteurianum's metabolic shift when grown with Geobacter sulfurreducens.	Berthomieu R, Perez-Bernal MF, Santa-Catalina G, Desmond-Le Quemener E, Bernet N, Trably E.	Appl Microbiol Biotechnol	10.1007/s00253-021-11736-7	2022
	Excessive Extracellular Ammonium Production by a Free-Living Nitrogen-Fixing Soil Clostridium sp. Strain.	Park S, Jang J.	Microorganisms	10.3390/microorganisms12122634	2024
Enzymology	Introduction of glycine synthase enables uptake of exogenous formate and strongly impacts the metabolism in Clostridium pasteurianum.	Hong Y, Arbter P, Wang W, Rojas LN, Zeng AP.	Biotechnol Bioeng	10.1002/bit.27658	2021
	Colorimetric Determination of Tungsten and Molybdenum in Biological Samples.	Donaghy AP, Schut GJ, Shao N, Poole FL, Adams MWW.	Bio Protoc	10.21769/bioprotoc.5195	2025
Enzymology	Predicting the Structure of Enzymes with Metal Cofactors: The Example of [FeFe] Hydrogenases.	Botticelli S, La Penna G, Minicozzi V, Stellato F, Morante S, Rossi G, Faraloni C.	Int J Mol Sci	10.3390/ijms25073663	2024
Metabolism	Following Electroenzymatic Hydrogen Production by Rotating Ring-Disk Electrochemistry and Mass Spectrometry*.	Khushvakov J, Nussbaum R, Cadoux C, Duan J, Stripp ST, Milton RD.	Angew Chem Int Ed Engl	10.1002/anie.202100863	2021
	Influence of Processing Parameters and Natural Antimicrobial on Alicyclobacillus acidoterrestris and Clostridium pasteurianum Using Response Surface Methodology.	Hadj Saadoun J, Levante A, Marrella M, Bernini V, Neviani E, Lazzi C.	Foods	10.3390/foods11071063	2022
Metabolism	Large anions induce H₂-production from the nitrogenase MoFe proteins of Clostridium Pasteurianum and Azotobacter vinelandii.	Wang ZC, Watt GD.	J Inorg Biochem	10.1016/j.jinorgbio.2020.111075	2020
	Structural evolution of nitrogenase over 3 billion years.	Cuevas Zuviria B, Detemple F, Amritkar K, Garcia AK, Seefeldt L, Einsle O, Kacar B.	Elife	10.7554/elife.105613	2025
	Temperature-dependent iron motion in extremophile rubredoxins - no need for 'corresponding states'.	Jenney FE, Wang H, George SJ, Xiong J, Guo Y, Gee LB, Marizcurrena JJ, Castro-Sowinski S, Staskiewicz A, Yoda Y, Hu MY, Tamasaku K, Nagasawa N, Li L, Matsuura H, Doukov T, Cramer SP.	Sci Rep	10.1038/s41598-024-62261-2	2024
	Biohydrogen production in a continuous liquid/gas hollow fiber membrane bioreactor: Efficient retention of hydrogen producing bacteria via granule and biofilm formation.	Renaudie M, Dumas C, Vuilleumier S, Ernst B.	Bioresour Technol	10.1016/j.biortech.2020.124203	2021
Enzymology	Cyanophenylalanine as an Infrared Probe for Iron-Sulfur Cluster Redox State in Multicenter Metalloenzymes.	Duan Z, Wei J, Carr SB, Ramirez M, Evans RM, Ash PA, Rodriguez-Macia P, Sachdeva A, Vincent KA.	Chembiochem	10.1002/cbic.202500251	2025
	Variability in Arsenic Methylation Efficiency across Aerobic and Anaerobic Microorganisms.	Viacava K, Meibom KL, Ortega D, Dyer S, Gelb A, Falquet L, Minton NP, Mestrot A, Bernier-Latmani R.	Environ Sci Technol	10.1021/acs.est.0c03908	2020
Enzymology	Application of artificial backbone connectivity in the development of metalloenzyme mimics.	Wolfe JA, Horne WS.	Curr Opin Chem Biol	10.1016/j.cbpa.2024.102509	2024
Metabolism	Stimulation of ferrihydrite nanorods on fermentative hydrogen production by Clostridium pasteurianum.	Zhang Y, Xiao L, Wang S, Liu F.	Bioresour Technol	10.1016/j.biortech.2019.03.088	2019
Metabolism	Characterization and Engineering of a Clostridium Glycine Riboswitch and Its Use To Control a Novel Metabolic Pathway for 5-Aminolevulinic Acid Production in Escherichia coli.	Zhou L, Ren J, Li Z, Nie J, Wang C, Zeng AP.	ACS Synth Biol	10.1021/acssynbio.9b00137	2019
Metabolism	Homologous overexpression of hydrogenase and glycerol dehydrogenase in Clostridium pasteurianum to enhance hydrogen production from crude glycerol.	Sarma S, Ortega D, Minton NP, Dubey VK, Moholkar VS.	Bioresour Technol	10.1016/j.biortech.2019.03.074	2019
Enzymology	Enhanced Electrosynthetic Hydrogen Evolution by Hydrogenases Embedded in a Redox-Active Hydrogel.	Ruth JC, Milton RD, Gu W, Spormann AM.	Chemistry	10.1002/chem.202000750	2020
Enzymology	Turning the FeFe hydrogenase from Clostridium beijerinckii into an efficient H₂ oxidation catalyst using a redox-active matrix.	Filmon DT, Jaenecke J, Winkler M, Fourmond V, Leger C, Plumere N.	Proc Natl Acad Sci U S A	10.1073/pnas.2514698122	2025
	Optimization of 1,3-propanediol production from fermentation of crude glycerol by immobilized Bacillus pumilus.	Pinyaphong P, La-Up A.	Heliyon	10.1016/j.heliyon.2024.e35349	2024
Metabolism	Enhanced electron transfer of different mediators for strictly opposite shifting of metabolism in Clostridium pasteurianum grown on glycerol in a new electrochemical bioreactor.	Utesch T, Sabra W, Prescher C, Baur J, Arbter P, Zeng AP.	Biotechnol Bioeng	10.1002/bit.26963	2019
	Enrichment of Nitrogen-Fixing Bacteria in a Nitrogen-Deficient Wastewater Treatment System.	Ospina-Betancourth C, Acharya K, Allen B, Entwistle J, Head IM, Sanabria J, Curtis TP.	Environ Sci Technol	10.1021/acs.est.9b05322	2020
Phenotype	Phenotype analysis of cultivation processes via unsupervised machine learning: Demonstration for Clostridium pasteurianum.	Hong Y, Nguyen T, Arbter P, Utesch T, Zeng AP.	Eng Life Sci	10.1002/elsc.202100114	2022
Metabolism	Ferredoxin reduction by hydrogen with iron functions as an evolutionary precursor of flavin-based electron bifurcation.	Brabender M, Henriques Pereira DP, Mrnjavac N, Schlikker ML, Kimura ZI, Sucharitakul J, Kleinermanns K, Tuysuz H, Buckel W, Preiner M, Martin WF.	Proc Natl Acad Sci U S A	10.1073/pnas.2318969121	2024
	Loss of Specific Active-Site Iron Atoms in Oxygen-Exposed [FeFe]-Hydrogenase Determined by Detailed X-ray Structure Analyses.	Esselborn J, Kertess L, Apfel UP, Hofmann E, Happe T.	J Am Chem Soc	10.1021/jacs.9b07808	2019
Enzymology	Cyanide Binding to [FeFe]-Hydrogenase Stabilizes the Alternative Configuration of the Proton Transfer Pathway.	Duan J, Hemschemeier A, Burr DJ, Stripp ST, Hofmann E, Happe T.	Angew Chem Int Ed Engl	10.1002/anie.202216903	2023
	Genomic Insights into Selenate Reduction by Anaerobacillus Species.	Wang Q, Zhang J, Liang J, Wang Y, Ren C, Chen X, Cheng D, Zhang H, Liu H.	Microorganisms	10.3390/microorganisms13030659	2025
Metabolism	Designing a modified clostridial 2[4Fe-4S] ferredoxin as a redox coupler to directly link photosystem I with a Pt nanoparticle.	Walters KA, Golbeck JH.	Photosynth Res	10.1007/s11120-019-00679-w	2020
	N-Terminal Metal-Binding Domain of Arabidopsis IBR5 Is Important for Its in Planta Functions.	Yeon J, Lim J, Song SK, Yi H.	Int J Mol Sci	10.3390/ijms26199315	2025
	Facile Functionalization of Carbon Electrodes for Efficient Electroenzymatic Hydrogen Production.	Liu Y, Webb S, Moreno-Garcia P, Kulkarni A, Maroni P, Broekmann P, Milton RD.	JACS Au	10.1021/jacsau.2c00551	2023
	Efficient dark fermentative hydrogen production from enzyme hydrolyzed rice straw by Clostridium pasteurianum (MTCC116).	Srivastava N, Srivastava M, Kushwaha D, Gupta VK, Manikanta A, Ramteke PW, Mishra PK.	Bioresour Technol	10.1016/j.biortech.2017.04.077	2017
Enzymology	A [FeFe] Hydrogenase-Rubrerythrin Chimeric Enzyme Functions to Couple H₂ Oxidation to Reduction of H₂O₂ in the Foodborne Pathogen Clostridium perfringens.	Taylor J, Mulder DW, Corrigan PS, Ratzloff MW, Irizarry Gonzalez N, Lubner CE, King PW, Silakov A.	J Am Chem Soc	10.1021/jacs.4c18425	2025
	Diffusion network of CO in FeFe-Hydrogenase.	Liu Y, Mohammadi M, Vashisth H.	J Chem Phys	10.1063/1.5054877	2018
Enzymology	Bio-Inspired Self-Assembly of Enzyme-Micelle Systems for Semi-Artificial Photosynthesis.	Liu Y, Rodriguez-Jimenez S, Song H, Pannwitz A, Kim D, Coito AM, Manuel RR, Webb S, Su L, Bonke SA, Milton RD, Pereira IAC, Bonnet S, Hammarstrom L, Reisner E.	Angew Chem Int Ed Engl	10.1002/anie.202424222	2025
	High-Performance Microbial Fuel Cell for Aromatic Hydrocarbon Bioremediation: Leveraging a Unique Mangrove-Derived Electrogenic Consortium.	de Souza JC, Bonizol Zani AC, Silva JP, Dos Santos A, Umbuzeiro GA, Bueno AV, Lobo FL, Reginatto V, de Andrade AR.	ACS Omega	10.1021/acsomega.5c05703	2025
	Changes in a glycerol-degrading bacterial community in an upflow anaerobic reactor for 1,3-propanediol production.	Cordeiro CN, Rojas P, Kato MT, Florencio L, Sanz JL.	Appl Microbiol Biotechnol	10.1007/s00253-025-13413-5	2025
Metabolism	A novel strategy to enhance biohydrogen production using graphene oxide treated thermostable crude cellulase and sugarcane bagasse hydrolyzate under co-culture system.	Srivastava N, Srivastava M, Gupta VK, Ramteke PW, Mishra PK.	Bioresour Technol	10.1016/j.biortech.2018.09.038	2018
	Groundwater denitrification using electro-assisted autotrophic processes: exploring bacterial community dynamics in a single-chamber reactor.	Toledo-Alarcon J, Ortega-Martinez E, Pavez-Jara J, Franchi O, Nancucheo I, Zuniga-Barra H, Campos JL, Jeison D.	Front Bioeng Biotechnol	10.3389/fbioe.2025.1475589	2025
	Metabolic flux network analysis of hydrogen production from crude glycerol by Clostridium pasteurianum.	Sarma S, Anand A, Dubey VK, Moholkar VS.	Bioresour Technol	10.1016/j.biortech.2017.03.168	2017
Metabolism	Microbial synthesis of metallic molybdenum nanoparticles.	Nordmeier A, Merwin A, Roeper DF, Chidambaram D.	Chemosphere	10.1016/j.chemosphere.2018.02.079	2018
Metabolism	Application of forward osmosis technology in crude glycerol fermentation biorefinery-potential and challenges.	Kalafatakis S, Braekevelt S, Lymperatou A, Zarebska A, Helix-Nielsen C, Lange L, Skiadas IV, Gavala HN.	Bioprocess Biosyst Eng	10.1007/s00449-018-1938-8	2018
	Production of biological hydrogen from Quinoa residue using dark fermentation and estimation of its microbial diversity.	Dursun N.	Heliyon	10.1016/j.heliyon.2024.e25018	2024
	A novel downstream process for highly pure 1,3-propanediol from an efficient fed-batch fermentation of raw glycerol by Clostridium pasteurianum.	Zhang C, Sharma S, Wang W, Zeng AP.	Eng Life Sci	10.1002/elsc.202100012	2021
Metabolism	The role of 1,3-propanediol production in fermentation of glycerol by Clostridium pasteurianum.	Johnson EE, Rehmann L.	Bioresour Technol	10.1016/j.biortech.2016.02.088	2016
Metabolism	Chalcogenide substitution in the [2Fe] cluster of [FeFe]-hydrogenases conserves high enzymatic activity.	Kertess L, Wittkamp F, Sommer C, Esselborn J, Rudiger O, Reijerse EJ, Hofmann E, Lubitz W, Winkler M, Happe T, Apfel UP.	Dalton Trans	10.1039/c7dt03785f	2017
Enzymology	Fantastic [FeFe]-Hydrogenases and Where to Find Them.	Morra S.	Front Microbiol	10.3389/fmicb.2022.853626	2022
	Storage of the vital metal tungsten in a dominant SCFA-producing human gut microbe Eubacterium limosum and implications for other gut microbes.	Shao N, Zhou D, Schut GJ, Poole FL, Coffey SB, Donaghy AP, Putumbaka S, Thorgersen MP, Chen L, Rose J, Wang B-C, Adams MWW.	mBio	10.1128/mbio.02605-24	2025
Metabolism	Impact of butyric acid on butanol formation by Clostridium pasteurianum.	Regestein L, Doerr EW, Staaden A, Rehmann L.	Bioresour Technol	10.1016/j.biortech.2015.07.085	2015
	Effect of loading rate and pH on glycerol fermentation and microbial population in an upflow anaerobic filter reactor.	Cordeiro CN, Rojas P, Veras STS, Kato MT, Florencio L, Sanz JL.	Bioprocess Biosyst Eng	10.1007/s00449-024-03003-6	2024
	Electrostatic [FeFe]-hydrogenase-carbon nitride assemblies for efficient solar hydrogen production.	Liu Y, Pulignani C, Webb S, Cobb SJ, Rodriguez-Jimenez S, Kim D, Milton RD, Reisner E.	Chem Sci	10.1039/d4sc00640b	2024
	Electrochemical control of [FeFe]-hydrogenase single crystals reveals complex redox populations at the catalytic site.	Morra S, Duan J, Winkler M, Ash PA, Happe T, Vincent KA.	Dalton Trans	10.1039/d1dt02219a	2021
Enzymology	Detection of Brucellosis in Sika Deer ( Cervus nippon ) through Loop-mediated Isothermal Amplification (LAMP).	Liu Q, Wei J, Sun Q, Wang B, Wang Y, Hu Y, Wu W.	J Wildl Dis	10.7589/2016-05-105	2017
	Mimicking the Electron Transport Chain and Active Site of [FeFe] Hydrogenases in One Metal-Organic Framework: Factors That Influence Charge Transport.	Castner AT, Johnson BA, Cohen SM, Ott S.	J Am Chem Soc	10.1021/jacs.1c01361	2021
Metabolism	High-Throughput Screening of Catalytic H₂ Production.	Koo J, Schnabel T, Liong S, Evitt NH, Swartz JR.	Angew Chem Int Ed Engl	10.1002/anie.201610260	2017
	Growth substrate limitation enhances anaerobic arsenic methylation by Paraclostridium bifermentans strain EML.	Qiao J, Sallet H, Meibom KL, Bernier-Latmani R.	Appl Environ Microbiol	10.1128/aem.00961-24	2024
Metabolism	Reduction Potentials of [FeFe]-Hydrogenase Accessory Iron-Sulfur Clusters Provide Insights into the Energetics of Proton Reduction Catalysis.	Artz JH, Mulder DW, Ratzloff MW, Lubner CE, Zadvornyy OA, LeVan AX, Williams SG, Adams MWW, Jones AK, King PW, Peters JW.	J Am Chem Soc	10.1021/jacs.7b02099	2017
	Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.	Martini MA, Bikbaev K, Pang Y, Lorent C, Wiemann C, Breuer N, Zebger I, DeBeer S, Span I, Bjornsson R, Birrell JA, Rodriguez-Macia P.	Chem Sci	10.1039/d2sc06098a	2023
Metabolism	Electrochemical Investigations of the Mechanism of Assembly of the Active-Site H-Cluster of [FeFe]-Hydrogenases.	Megarity CF, Esselborn J, Hexter SV, Wittkamp F, Apfel UP, Happe T, Armstrong FA.	J Am Chem Soc	10.1021/jacs.6b09366	2016
	Crystal structure of the [2Fe-2S] protein I (Shethna protein I) from Azotobacter vinelandii.	Kabasakal BV, Cotton CAR, Murray JW.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x21009936	2021
Phylogeny	Ferredoxins: Functions, Evolution, Potential Applications, and Challenges of Subtype Classification.	Syed K.	Curr Issues Mol Biol	10.3390/cimb46090574	2024
Enzymology	Kinetic mechanisms of electron bifurcation with electron transfer flavoprotein, NADH, butyryl-CoA dehydrogenase, and ferredoxin reveal a semiquinone cycle.	Sucharitakul J, Mangkalee M, Intasian P, Pornsuwan S, Ermler U, Buckel W, Chaiyen P.	J Biol Chem	10.1016/j.jbc.2025.110727	2025
Genetics	Macrogenomics Reveals Effects on Marine Microbial Communities during Oplegnathus punctatus Enclosure Farming.	Wang L, Lu X, Xing Z, Teng X, Wang S, Liu T, Zheng L, Wang X, Qu J.	Biology (Basel)	10.3390/biology13080618	2024
Metabolism	Proton transport in Clostridium pasteurianum [FeFe] hydrogenase I: a computational study.	Long H, King PW, Chang CH.	J Phys Chem B	10.1021/jp408621r	2014
	Structure and Function of Photosystem I-[FeFe] Hydrogenase Protein Fusions: An All-Atom Molecular Dynamics Study.	Harris BJ, Cheng X, Frymier P.	J Phys Chem B	10.1021/acs.jpcb.5b07812	2016
	Microbial Lipopeptide-Producing Strains and Their Metabolic Roles under Anaerobic Conditions.	Li JY, Wang L, Liu YF, Zhou L, Gang HZ, Liu JF, Yang SZ, Mu BZ.	Microorganisms	10.3390/microorganisms9102030	2021
Enzymology	Functional roles of the [2Fe-2S] clusters in Synechocystis PCC 6803 Hox [NiFe]-hydrogenase reactivity with ferredoxins.	Blahut MR, Dawson ME, Kisgeropoulos EC, Ledinina AE, Mulder DW, King PW.	J Biol Chem	10.1016/j.jbc.2024.107936	2024
	Designed Rubredoxin miniature in a fully artificial electron chain triggered by visible light.	Chino M, Di Costanzo LF, Leone L, La Gatta S, Famulari A, Chiesa M, Lombardi A, Pavone V.	Nat Commun	10.1038/s41467-023-37941-8	2023
Metabolism	Single-Amino Acid Modifications Reveal Additional Controls on the Proton Pathway of [FeFe]-Hydrogenase.	Cornish AJ, Ginovska B, Thelen A, da Silva JC, Soares TA, Raugei S, Dupuis M, Shaw WJ, Hegg EL.	Biochemistry	10.1021/acs.biochem.5b01044	2016
	Microbial Community Shifts in Tea Plant Rhizosphere under Seawater Stress: Enrichment of Beneficial Taxa.	Zhang X, Li H, Li B, Song K, Sha Y, Liu Y, Dong S, Wang D, Yang L.	Microorganisms	10.3390/microorganisms12071287	2024
	Rapid and reliable method for identification of associated endonuclease cleavage and recognition sites.	Jensen TO, Kvist T, Mikkelsen MJ, Westermann P.	Lett Appl Microbiol	10.1111/lam.12238	2014
Genetics	Novel anaerobic selenium oxyanion reducers native to FGD wastewater for enhanced selenium removal.	Sarkar P, Beebe M, Bhandari G, Wielinski J, Lowry GV, Gulliver D.	Appl Environ Microbiol	10.1128/aem.01222-24	2025
Metabolism	Genome-scale metabolic model of the versatile bacterium Paracoccus denitrificans Pd1222.	Bordel S, Martin-Gonzalez D, Borner T, Munoz R, Santos-Beneit F.	mSystems	10.1128/msystems.01077-23	2024
Metabolism	Mechanistic investigation of ultrasonic enhancement of glycerol bioconversion by immobilized Clostridium pasteurianum on silica support.	Khanna S, Goyal A, Moholkar VS.	Biotechnol Bioeng	10.1002/bit.24839	2013
Metabolism	Nonelectroactive clostridium obtains extracellular electron transfer-capability after forming chimera with Geobacter.	Liu X, Ye Y, Yang N, Cheng C, Rensing C, Jin C, Nealson KH, Zhou S.	ISME Commun	10.1093/ismeco/ycae058	2024
Metabolism	Effect of fermentation parameters on bio-alcohols production from glycerol using immobilized Clostridium pasteurianum: an optimization study.	Khanna S, Goyal A, Moholkar VS.	Prep Biochem Biotechnol	10.1080/10826068.2013.805625	2013
	The Antibacterial Efficacy of Far-UVC Light: A Combined-Method Study Exploring the Effects of Experimental and Bacterial Variables on Dose-Response.	Griffin DT, Gourlay T, Maclean M.	Pathogens	10.3390/pathogens13080698	2024
	Comparison of two acidophilic sulfidogenic consortia for the treatment of acidic mine water.	Frederico TD, Nancucheo I, Santos WCB, Oliveira RRM, Buzzi DC, Pires ES, Silva PMP, Lucheta AR, Alves JO, de Oliveira GC, Bitencourt JAP.	Front Bioeng Biotechnol	10.3389/fbioe.2022.1048412	2022
	Arsenite Methyltransferase Diversity and Optimization of Methylation Efficiency.	Chen J, Rosen BP.	Environ Sci Technol	10.1021/acs.est.3c00966	2023
Enzymology	Structural insight on the mechanism of an electron-bifurcating [FeFe] hydrogenase.	Furlan C, Chongdar N, Gupta P, Lubitz W, Ogata H, Blaza JN, Birrell JA.	Elife	10.7554/elife.79361	2022
Metabolism	Enhancing butanol production with Clostridium pasteurianum CH4 using sequential glucose-glycerol addition and simultaneous dual-substrate cultivation strategies.	Kao WC, Lin DS, Cheng CL, Chen BY, Lin CY, Chang JS.	Bioresour Technol	10.1016/j.biortech.2012.09.108	2013
Enzymology	Molecular dynamics study of the proposed proton transport pathways in [FeFe]-hydrogenase.	Ginovska-Pangovska B, Ho MH, Linehan JC, Cheng Y, Dupuis M, Raugei S, Shaw WJ.	Biochim Biophys Acta	10.1016/j.bbabio.2013.08.004	2014
	Exploitation of a Type 1 Toxin-Antitoxin System as an Inducible Counter-Selective Marker for Genome Editing in the Acetogen Eubacterium limosum.	Millard J, Agius A, Zhang Y, Soucaille P, Minton NP.	Microorganisms	10.3390/microorganisms11051256	2023
Metabolism	Tuning Catalytic Bias of Hydrogen Gas Producing Hydrogenases.	Artz JH, Zadvornyy OA, Mulder DW, Keable SM, Cohen AE, Ratzloff MW, Williams SG, Ginovska B, Kumar N, Song J, McPhillips SE, Davidson CM, Lyubimov AY, Pence N, Schut GJ, Jones AK, Soltis SM, Adams MWW, Adams MWW, Raugei S, King PW, Peters JW.	J Am Chem Soc	10.1021/jacs.9b08756	2020
	Electrofermentation increases concentration of poly gamma-glutamic acid in Bacillus subtilis biofilms.	Adilkhanova A, Ormantayeva A, Kaziullayeva A, Olaifa K, Eghtesadi N, Abbas AH, Calvio C, Pham TT, Ajunwa OM, Marsili E.	Microb Biotechnol	10.1111/1751-7915.14426	2024
Metabolism	Pan-genome-scale metabolic modeling of Bacillus subtilis reveals functionally distinct groups.	Neal M, Brakewood W, Betenbaugh M, Zengler K.	mSystems	10.1128/msystems.00923-24	2024
	Preparation and spectroscopic characterization of lyophilized Mo nitrogenase.	Van Stappen C, Decamps L, DeBeer S.	J Biol Inorg Chem	10.1007/s00775-020-01838-4	2021
Proteome	Antibiotic resistance in Neisseria gonorrhoeae: broad-spectrum drug target identification using subtractive genomics.	Omeershffudin UNM, Kumar S.	Genomics Inform	10.5808/gi.22066	2023
Metabolism	Fermentation of crude glycerol from biodiesel production by Clostridium pasteurianum.	Jensen TO, Kvist T, Mikkelsen MJ, Christensen PV, Westermann P.	J Ind Microbiol Biotechnol	10.1007/s10295-011-1077-6	2012
	Analysis of early intermediate states of the nitrogenase reaction by regularization of EPR spectra.	Heidinger L, Perez K, Spatzal T, Einsle O, Weber S, Rees DC, Schleicher E.	Nat Commun	10.1038/s41467-024-48271-8	2024
Metabolism	Continuous butanol production with reduced byproducts formation from glycerol by a hyper producing mutant of Clostridium pasteurianum.	Malaviya A, Jang YS, Lee SY.	Appl Microbiol Biotechnol	10.1007/s00253-011-3629-0	2012
Enzymology	Functional analysis of the whole CYPome and Fdxome of Streptomyces venezuelae ATCC 15439.	Li S, Li Z, Zhang G, Urlacher VB, Ma L, Li S.	Eng Microbiol	10.1016/j.engmic.2024.100166	2024
Enzymology	Nitrogenase beyond the Resting State: A Structural Perspective.	Warmack RA, Rees DC.	Molecules	10.3390/molecules28247952	2023
Enzymology	The Alga Uronema belkae Has Two Structural Types of [FeFe]-Hydrogenases with Different Biochemical Properties.	Alavi G, Engelbrecht V, Hemschemeier A, Happe T.	Int J Mol Sci	10.3390/ijms242417311	2023
	Molecular principles of redox-coupled sodium pumping of the ancient Rnf machinery.	Kumar A, Roth J, Kim H, Saura P, Bohn S, Reif-Trauttmansdorff T, Schubert A, Kaila VRI, Schuller JM, Muller V.	Nat Commun	10.1038/s41467-025-57375-8	2025
	Iron-sulphur protein catalysed [4+2] cycloadditions in natural product biosynthesis.	Zheng Y, Sakai K, Watanabe K, Takagi H, Sato-Shiozaki Y, Misumi Y, Miyanoiri Y, Kurisu G, Nogawa T, Takita R, Takahashi S.	Nat Commun	10.1038/s41467-024-50142-1	2024
	Enhanced enzymatic sugar production from corn stover by combination of water extraction and glycerol-assisted instant catapult steam explosion.	Wang F, Dong H, Yu W, Gao Y, Mao G, An Y, Xie H, Song A, Zhang Z.	Bioresour Bioprocess	10.1186/s40643-024-00739-7	2024
Enzymology	Electrochemical Characterization of a Complex FeFe Hydrogenase, the Electron-Bifurcating Hnd From Desulfovibrio fructosovorans.	Jacq-Bailly A, Benvenuti M, Payne N, Kpebe A, Felbek C, Fourmond V, Leger C, Brugna M, Baffert C.	Front Chem	10.3389/fchem.2020.573305	2020
	C(P)XCG Proteins of Haloferax volcanii with Predicted Zinc Finger Domains: The Majority Bind Zinc, but Several Do Not.	Uresin D, Schulte J, Morgner N, Soppa J.	Int J Mol Sci	10.3390/ijms25137166	2024
	Thermoaciduric Clostridium pasteurianum spoilage of shelf-stable apple juice.	Feng G, Churey JJ, Worobo RW.	J Food Prot	10.4315/0362-028x-73.10.1886	2010
	Investigation of the human-gut-kidney axis by fecal proteomics, highlights molecular mechanisms affected in CKD.	Lohia S, Valkenburg S, Stroggilos R, Lygirou V, Makridakis M, Zoidakis J, Verbeke F, Glorieux G, Vlahou A.	Heliyon	10.1016/j.heliyon.2024.e32828	2024
Phylogeny	Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS).	Deshpande SV, Reed TM, Sullivan RF, Kerkhof LJ, Beigel KM, Wade MM.	Genes (Basel)	10.3390/genes10080578	2019
Metabolism	Development of flow cytometry technique for detection of thinning of peptidoglycan layer as a result of solvent production by Clostridium pasteurianum.	Linhova M, Patakova P, Lipovsky J, Fribert P, Paulova L, Rychtera M, Melzoch K.	Folia Microbiol (Praha)	10.1007/s12223-010-0054-1	2010
	Investigation of the Ferredoxin's Influence on the Anaerobic and Aerobic, Enzymatic H₂ Production.	Koo J, Cha Y.	Front Bioeng Biotechnol	10.3389/fbioe.2021.641305	2021
Metabolism	Proliferation of diversified clostridial species during biological soil disinfestation incorporated with plant biomass under various conditions.	Mowlick S, Takehara T, Kaku N, Ueki K, Ueki A.	Appl Microbiol Biotechnol	10.1007/s00253-012-4532-z	2013
Metabolism	Inhibition of biocatalysis in [Fe-Fe] hydrogenase by oxygen: molecular dynamics and density functional theory calculations.	Hong G, Pachter R.	ACS Chem Biol	10.1021/cb3001149	2012
Metabolism	Phylogeny of 16S rRNA and nifH genes and regulation of nitrogenase activity by oxygen and ammonium in the genus Paenibacillus.	Xie JB, Bai LQ, Wang LY, Chen SF.	Mikrobiologiia	10.1134/s0026261712060173	2012
Genetics	A genomic analysis reveals the diversity of cellulosome displaying bacteria.	Minor CM, Takayesu A, Ha SM, Salwinski L, Sawaya MR, Pellegrini M, Clubb RT.	Front Microbiol	10.3389/fmicb.2024.1473396	2024
Genetics	Exploiting the Type I-B CRISPR Genome Editing System in Thermoanaerobacterium aotearoense SCUT27 and Engineering the Strain for Enhanced Ethanol Production.	Dai K, Fu H, Guo X, Qu C, Lan Y, Wang J.	Appl Environ Microbiol	10.1128/aem.00751-22	2022
	The Nonphysiological Reductant Sodium Dithionite and [FeFe] Hydrogenase: Influence on the Enzyme Mechanism.	Martini MA, Rudiger O, Breuer N, Noring B, DeBeer S, Rodriguez-Macia P, Birrell JA.	J Am Chem Soc	10.1021/jacs.1c07322	2021
	A novel and improved selective media for the isolation and enumeration of Klebsiella species.	Prasad M, Shetty SK, Nair BG, Pal S, Madhavan A.	Appl Microbiol Biotechnol	10.1007/s00253-022-12270-w	2022
Enzymology	Enhancing 1,3-Propanediol Productivity in the Non-Model Chassis Clostridium beijerinckii through Genetic Manipulation.	Bortolucci J, Guazzaroni ME, Schoch T, Durre P, Reginatto V.	Microorganisms	10.3390/microorganisms11071855	2023
Metabolism	Biosynthesis of Selenium Nanoparticles using yeast Nematospora coryli and examination of their anti-candida and anti-oxidant activities.	Rasouli M.	IET Nanobiotechnol	10.1049/iet-nbt.2018.5187	2019
Metabolism	Rapid flow cytometric method for viability determination of solventogenic clostridia.	Linhova M, Branska B, Patakova P, Lipovsky J, Fribert P, Rychtera M, Melzoch K.	Folia Microbiol (Praha)	10.1007/s12223-012-0131-8	2012
Phylogeny	Association of gestational diabetes mellitus with changes in gut microbiota composition at the species level.	Chen F, Gan Y, Li Y, He W, Wu W, Wang K, Li Q.	BMC Microbiol	10.1186/s12866-021-02207-0	2021
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Enzymology	Ferredoxin-linked flavoenzyme defines a family of pyridine nucleotide-independent thioredoxin reductases.	Buey RM, Fernandez-Justel D, de Pereda JM, Revuelta JL, Schurmann P, Buchanan BB, Balsera M.	Proc Natl Acad Sci U S A	10.1073/pnas.1812781115	2018
	N-methyl-bacillithiol, a Novel Thiol from Anaerobic Bacteria.	Newton GL, Rawat M.	mBio	10.1128/mbio.02634-18	2019
	Increasing the O₂ Resistance of the [FeFe]-Hydrogenase CbA5H through Enhanced Protein Flexibility.	Rutz A, Das CK, Fasano A, Jaenecke J, Yadav S, Apfel UP, Engelbrecht V, Fourmond V, Leger C, Schafer LV, Happe T.	ACS Catal	10.1021/acscatal.2c04031	2023
	Genetic diversity and amplification of different clostridial [FeFe] hydrogenases by group-specific degenerate primers.	Calusinska M, Joris B, Wilmotte A.	Lett Appl Microbiol	10.1111/j.1472-765x.2011.03135.x	2011
	Exploring the interaction between the gut microbiota and cyclic adenosine monophosphate-protein kinase A signaling pathway: a potential therapeutic approach for neurodegenerative diseases.	Deng F, Yang D, Qing L, Chen Y, Zou J, Jia M, Wang Q, Jiang R, Huang L.	Neural Regen Res	10.4103/nrr.nrr-d-24-00607	2025
Genetics	CRISPR-Cas9-based genome-editing technologies in engineering bacteria for the production of plant-derived terpenoids.	Sun X, Zhang H, Jia Y, Li J, Jia M.	Eng Microbiol	10.1016/j.engmic.2024.100154	2024
	New Insights into the Physiology of the Propionate Producers Anaerotignum propionicum and Anaerotignum neopropionicum (Formerly Clostridium propionicum and Clostridium neopropionicum).	Baur T, Durre P.	Microorganisms	10.3390/microorganisms11030685	2023
Metabolism	The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.	Lampret O, Duan J, Hofmann E, Winkler M, Armstrong FA, Happe T.	Proc Natl Acad Sci U S A	10.1073/pnas.2007090117	2020
	Putative Nickel-Dependent Anaerobic Carbon Monoxide Uptake Occurs Commonly in Soils and Sediments at Ambient Temperature and Might Contribute to Atmospheric and Sub-Atmospheric Carbon Monoxide Uptake During Anoxic Conditions.	DePoy AN, King GM.	Front Microbiol	10.3389/fmicb.2022.736189	2022
	Inhibitory Effect of Select Nitrocompounds and Chlorate against Yersinia ruckeri and Yersinia aleksiciae In Vitro.	Latham EA, Anderson RC, Wottlin LR, Poole TL, Crippen TL, Schlosser WD, Harvey RB, Hume ME.	Pathogens	10.3390/pathogens11111381	2022
Metabolism	Hydrolysis of lignocellulosic feedstock by novel cellulases originating from Pseudomonas sp. CL3 for fermentative hydrogen production.	Cheng CL, Chang JS.	Bioresour Technol	10.1016/j.biortech.2011.03.053	2011
	Promising biomedical applications using superparamagnetic nanoparticles	Fahim Y, Hasani I, Mahmoud Ragab W.	Eur J Med Res		2025
Enzymology	Catalytic turnover of [FeFe]-hydrogenase based on single-molecule imaging.	Madden C, Vaughn MD, Diez-Perez I, Brown KA, King PW, Gust D, Moore AL, Moore TA.	J Am Chem Soc	10.1021/ja207461t	2012
Metabolism	Electron Transfer to Nitrogenase in Different Genomic and Metabolic Backgrounds.	Poudel S, Colman DR, Fixen KR, Ledbetter RN, Zheng Y, Pence N, Seefeldt LC, Peters JW, Harwood CS, Boyd ES.	J Bacteriol	10.1128/jb.00757-17	2018
	Histidine Ligated Iron-Sulfur Peptides.	Valer L, Rossetto D, Parkkila T, Sebastianelli L, Guella G, Hendricks AL, Cowan JA, Sang L, Mansy SS.	Chembiochem	10.1002/cbic.202200202	2022
	Enhanced n-butanol production by Clostridium beijerinckii MCMB 581 in presence of selected surfactant.	Singh K, Gedam PS, Raut AN, Dhamole PB, Dhakephalkar PK, Ranade DR.	3 Biotech	10.1007/s13205-017-0803-9	2017
	Propionate production by Bacteroidia gut bacteria and its dependence on substrate concentrations differs among species.	Doring C, Basen M.	Biotechnol Biofuels Bioprod	10.1186/s13068-024-02539-9	2024
Enzymology	Characterization of [FeFe] Hydrogenase O2 Sensitivity Using a New, Physiological Approach.	Koo J, Shiigi S, Rohovie M, Mehta K, Swartz JR.	J Biol Chem	10.1074/jbc.m116.737122	2016
Enzymology	The Contribution of Proton-Donor pKa on Reactivity Profiles of [FeFe]-hydrogenases.	Kisgeropoulos EC, Bharadwaj VS, Mulder DW, King PW.	Front Microbiol	10.3389/fmicb.2022.903951	2022
	Emergence of an Orphan Nitrogenase Protein Following Atmospheric Oxygenation.	Cuevas-Zuviria B, Garcia AK, Rivier AJ, Rucker HR, Carruthers BM, Kacar B.	Mol Biol Evol	10.1093/molbev/msae067	2024
Genetics	Comparative genomic analysis reveals metabolic flexibility of Woesearchaeota.	Huang WC, Liu Y, Zhang X, Zhang CJ, Zou D, Zheng S, Xu W, Luo Z, Liu F, Li M.	Nat Commun	10.1038/s41467-021-25565-9	2021
Enzymology	The cyanobacterium Synechocystis sp. PCC 6803 is able to express an active [FeFe]-hydrogenase without additional maturation proteins.	Berto P, D'Adamo S, Bergantino E, Vallese F, Giacometti GM, Costantini P.	Biochem Biophys Res Commun	10.1016/j.bbrc.2011.01.095	2011
	Development of an enantiomer-specific stable carbon isotope analysis (ESIA) method for assessing the fate of alpha-hexachlorocyclo-hexane in the environment.	Badea SL, Vogt C, Gehre M, Fischer A, Danet AF, Richnow HH.	Rapid Commun Mass Spectrom	10.1002/rcm.4987	2011
	Redox tuning of the H-cluster by second coordination sphere amino acids in the sensory [FeFe] hydrogenase from Thermotoga maritima.	Chongdar N, Rodriguez-Macia P, Reijerse EJ, Lubitz W, Ogata H, Birrell JA.	Chem Sci	10.1039/d2sc06432d	2023
	On understanding proton transfer to the biocatalytic [Fe-Fe](H) sub-cluster in [Fe-Fe]H(2)ases: QM/MM MD simulations.	Hong G, Cornish AJ, Hegg EL, Pachter R.	Biochim Biophys Acta	10.1016/j.bbabio.2011.01.011	2011
	Probing Substrate Transport Effects on Enzymatic Hydrogen Catalysis: An Alternative Proton Transfer Pathway in Putatively Sensory [FeFe] Hydrogenase.	Cabotaje PR, Walter K, Zamader A, Huang P, Ho F, Land H, Senger M, Berggren G.	ACS Catal	10.1021/acscatal.3c02314	2023
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Metabolism	Unexpected diversity of ferredoxin-dependent thioredoxin reductases in cyanobacteria.	Buey RM, Fernandez-Justel D, Gonzalez-Holgado G, Martinez-Julvez M, Gonzalez-Lopez A, Velazquez-Campoy A, Medina M, Buchanan BB, Balsera M.	Plant Physiol	10.1093/plphys/kiab072	2021
	Nickel-Cobalt Oxide Nanoparticle-Induced Biohydrogen Production.	Li Z, Wang J, Tian K, Zhou C, Pei Y, Zhang J, Zang L.	ACS Omega	10.1021/acsomega.2c05580	2022
Genetics	Genome-Resolved Metagenomics Informs the Functional Ecology of Uncultured Acidobacteria in Redox Oscillated Sphagnum Peat.	Reji L, Zhang X.	mSystems	10.1128/msystems.00055-22	2022
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Enzymology	Cloning, expression and characterization of a thiolase gene from Clostridium pasteurianum.	Meng Y, Li J.	Biotechnol Lett	10.1007/s10529-006-9089-4	2006
	Novel anti-inflammatory properties of mannose oligosaccharides in the treatment of inflammatory bowel disease via LGALS3 modulation.	Du Y, Fan Y, Li X, Chen F.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00648-3	2025
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Metabolism	Adenosine-5'-Phosphosulfate- and Sulfite Reductases Activities of Sulfate-Reducing Bacteria from Various Environments.	Kushkevych I, Abdulina D, Kovac J, Dordevic D, Vitezova M, Iutynska G, Rittmann SKR.	Biomolecules	10.3390/biom10060921	2020
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	A site-differentiated [4Fe-4S] cluster controls electron transfer reactivity of Clostridium acetobutylicum [FeFe]-hydrogenase I.	Lubner CE, Artz JH, Mulder DW, Oza A, Ward RJ, Williams SG, Jones AK, Peters JW, Smalyukh II, Bharadwaj VS, King PW.	Chem Sci	10.1039/d1sc07120c	2022
Metabolism	Construction of a synthetic YdbK-dependent pyruvate:H2 pathway in Escherichia coli BL21(DE3).	Akhtar MK, Jones PR.	Metab Eng	10.1016/j.ymben.2009.01.002	2009
Enzymology	A Cytoplasmic NAD(P)H-Dependent Polysulfide Reductase with Thiosulfate Reductase Activity from the Hyperthermophilic Bacterium Thermotoga maritima.	Liang J, Huang H, Wang Y, Li L, Yi J, Wang S.	Microbiol Spectr	10.1128/spectrum.00436-22	2022
Metabolism	The final steps of [FeFe]-hydrogenase maturation.	Lampret O, Esselborn J, Haas R, Rutz A, Booth RL, Kertess L, Wittkamp F, Megarity CF, Armstrong FA, Winkler M, Happe T.	Proc Natl Acad Sci U S A	10.1073/pnas.1908121116	2019
	Energy Conservation in the Acetogenic Bacterium Clostridium aceticum.	Wiechmann A, Muller V.	Microorganisms	10.3390/microorganisms9020258	2021
Metabolism	Modelling NifH2 protein of Clostridium pasteurianum reveals clues about its physiological function.	Kasap M.	J Mol Graph Model	10.1016/j.jmgm.2006.01.006	2006
Metabolism	Characteristics of rapidly formed hydrogen-producing granules and biofilms.	Zhang ZP, Adav SS, Show KY, Tay JH, Liang DT, Lee DJ, Su A.	Biotechnol Bioeng	10.1002/bit.21956	2008
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	Engineering Nitrogenases for Synthetic Nitrogen Fixation: From Pathway Engineering to Directed Evolution.	Bennett EM, Murray JW, Isalan M.	Biodes Res	10.34133/bdr.0005	2023
Metabolism	Reversible Protonated Resting State of the Nitrogenase Active Site.	Morrison CN, Spatzal T, Rees DC.	J Am Chem Soc	10.1021/jacs.7b05695	2017
Enzymology	Spectroscopical Investigations on the Redox Chemistry of [FeFe]-Hydrogenases in the Presence of Carbon Monoxide.	Laun K, Mebs S, Duan J, Wittkamp F, Apfel UP, Happe T, Winkler M, Haumann M, Stripp ST.	Molecules	10.3390/molecules23071669	2018
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Enzymology	A Novel NADP-Dependent Formate Dehydrogenase From the Hyperthermophilic Archaeon Thermococcus onnurineus NA1.	Yang JI, Lee SH, Ryu JY, Lee HS, Kang SG.	Front Microbiol	10.3389/fmicb.2022.844735	2022
Enzymology	Quantitative fluorescent in-situ hybridization: a hypothesized competition mode between two dominant bacteria groups in hydrogen-producing anaerobic sludge processes.	Huang CL, Chen CC, Lin CY, Liu WT.	Water Sci Technol	10.2166/wst.2009.201	2009
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Metabolism	Comparative characterization of extracellular and intracellular hydrocarbons of Clostridium pasteurianum.	Bagaeva TV, Zinurova EE.	Biochemistry (Mosc)	10.1023/b:biry.0000026199.58194.98	2004
	Nitrogen fixation by diverse diazotrophic communities can support population growth of arboreal ants.	Nepel M, Pfeifer J, Oberhauser FB, Richter A, Woebken D, Mayer VE.	BMC Biol	10.1186/s12915-022-01289-0	2022
	Clostridium pasteurianum W5 synthesizes two NifH-related polypeptides under nitrogen-fixing conditions.	Kasap M, Chen JS.	Microbiology (Reading)	10.1099/mic.0.27931-0	2005
	Microbial Fuel Cell Based on Nitrogen-Fixing Rhizobium anhuiense Bacteria.	Zalneravicius R, Paskevicius A, Samukaite-Bubniene U, Ramanavicius S, Vilkiene M, Mockeviciene I, Ramanavicius A.	Biosensors (Basel)	10.3390/bios12020113	2022
Metabolism	Improved n-butanol production by a non-acetone producing Clostridium pasteurianum DSMZ 525 in mixed substrate fermentation.	Sabra W, Groeger C, Sharma PN, Zeng AP.	Appl Microbiol Biotechnol	10.1007/s00253-014-5588-8	2014
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Metabolism	Metal-substituted derivatives of the rubredoxin from Clostridium pasteurianum.	Maher M, Cross M, Wilce MC, Guss JM, Wedd AG.	Acta Crystallogr D Biol Crystallogr	10.1107/s090744490302794x	2004
Enzymology	Biochemical characterization of a mitochondrial-like organelle from Blastocystis sp. subtype 7.	Lantsman Y, Tan KSW, Morada M, Yarlett N.	Microbiology (Reading)	10.1099/mic.0.2008/017897-0	2008
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Enzymology	Frequency and potential dependence of reversible electrocatalytic hydrogen interconversion by [FeFe]-hydrogenases.	Pandey K, Islam ST, Happe T, Armstrong FA.	Proc Natl Acad Sci U S A	10.1073/pnas.1619961114	2017
	Variation of average g values and effective exchange coupling constants among [2Fe-2S] clusters: a density functional theory study of the impact of localization (trapping forces) versus delocalization (double-exchange) as competing factors.	Orio M, Mouesca JM.	Inorg Chem	10.1021/ic701730h	2008
	Revealing extracellular electron transfer mediated parasitism: energetic considerations.	Moscoviz R, Flayac C, Desmond-Le Quemener E, Trably E, Bernet N.	Sci Rep	10.1038/s41598-017-07593-y	2017
	Mechanistic Aspects of Microbe-Mediated Nanoparticle Synthesis.	Ghosh S, Ahmad R, Banerjee K, AlAjmi MF, Rahman S.	Front Microbiol	10.3389/fmicb.2021.638068	2021
	Base editing enables duplex point mutagenesis in Clostridium autoethanogenum at the price of numerous off-target mutations.	Seys FM, Humphreys CM, Tomi-Andrino C, Li Q, Millat T, Yang S, Minton NP.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1211197	2023
	Enhanced thermal stability achieved without increased conformational rigidity at physiological temperatures: spatial propagation of differential flexibility in rubredoxin hybrids.	LeMaster DM, Tang J, Paredes DI, Hernandez G.	Proteins	10.1002/prot.20594	2005
	Structural and functional determination of peptide versus small molecule ligand binding at the apelin receptor.	Williams TL, Verdon G, Kuc RE, Currinn H, Bender B, Solcan N, Schlenker O, Macrae RGC, Brown J, Schutz M, Zhukov A, Sinha S, de Graaf C, Graf S, Maguire JJ, Brown AJH, Davenport AP.	Nat Commun	10.1038/s41467-024-55381-w	2024
Metabolism	Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: effects of side-chain size on reduction potential.	Park IY, Eidsness MK, Lin IJ, Gebel EB, Youn B, Harley JL, Machonkin TE, Frederick RO, Markley JL, Smith ET, Ichiye T, Kang C.	Proteins	10.1002/prot.20243	2004
Metabolism	Dark hydrogen fermentation from hydrolyzed starch treated with recombinant amylase originating from Caldimonas taiwanensis On1.	Chen SD, Sheu DS, Chen WM, Lo YC, Huang TI, Lin CY, Chang JS.	Biotechnol Prog	10.1021/bp070187z	2007
	Hyperfine-shifted 13C resonance assignments in an iron-sulfur protein with quantum chemical verification: aliphatic C-H···S 3-center-4-electron interactions.	Westler WM, Lin IJ, Perczel A, Weinhold F, Markley JL.	J Am Chem Soc	10.1021/ja1049059	2011
	Structural and Biochemical Characterization of Thioredoxin-2 from Deinococcus radiodurans.	Kim MK, Zhao L, Jeong S, Zhang J, Jung JH, Seo HS, Choi JI, Lim S.	Antioxidants (Basel)	10.3390/antiox10111843	2021
	Customized exogenous ferredoxin functions as an efficient electron carrier.	Song Z, Wei C, Li C, Gao X, Mao S, Lu F, Qin HM.	Bioresour Bioprocess	10.1186/s40643-021-00464-5	2021
	Extending electron paramagnetic resonance to nanoliter volume protein single crystals using a self-resonant microhelix.	Sidabras JW, Duan J, Winkler M, Happe T, Hussein R, Zouni A, Suter D, Schnegg A, Lubitz W, Reijerse EJ.	Sci Adv	10.1126/sciadv.aay1394	2019
Metabolism	Quantitative analysis of a high-rate hydrogen-producing microbial community in anaerobic agitated granular sludge bed bioreactors using glucose as substrate.	Hung CH, Lee KS, Cheng LH, Huang YH, Lin PJ, Chang JS.	Appl Microbiol Biotechnol	10.1007/s00253-007-0854-7	2007
Metabolism	Structural and functional analysis of "non-smelly" proteins.	Yan J, Cheng J, Kurgan L, Uversky VN.	Cell Mol Life Sci	10.1007/s00018-019-03292-1	2020
Metabolism	Dark H2 fermentation from sucrose and xylose using H2-producing indigenous bacteria: feasibility and kinetic studies.	Lo YC, Chen WM, Hung CH, Chen SD, Chang JS.	Water Res	10.1016/j.watres.2007.08.023	2008
	Exploiting Biological Nitrogen Fixation: A Route Towards a Sustainable Agriculture.	Soumare A, Diedhiou AG, Thuita M, Hafidi M, Ouhdouch Y, Gopalakrishnan S, Kouisni L.	Plants (Basel)	10.3390/plants9081011	2020
Metabolism	The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer.	Park IY, Youn B, Harley JL, Eidsness MK, Smith E, Ichiye T, Kang C.	J Biol Inorg Chem	10.1007/s00775-004-0542-3	2004
	Tetrathiolate coordination of germanium(IV) in a protein active site.	LeMaster DM, Minnich M, Parsons PJ, Anderson JS, Hernandez G.	J Inorg Biochem	10.1016/j.jinorgbio.2006.03.014	2006
	Production of 1,3-PDO and butanol by a mutant strain of Clostridium pasteurianum with increased tolerance towards crude glycerol.	Jensen TO, Kvist T, Mikkelsen MJ, Westermann P.	AMB Express	10.1186/2191-0855-2-44	2012
Genetics	Highly efficient genome editing in Xanthomonas oryzae pv. oryzae through repurposing the endogenous type I-C CRISPR-Cas system.	Jiang D, Zhang D, Li S, Liang Y, Zhang Q, Qin X, Gao J, Qiu JL.	Mol Plant Pathol	10.1111/mpp.13178	2022
Enzymology	The monofunctional CO dehydrogenase CooS is essential for growth of Thermoanaerobacter kivui on carbon monoxide.	Jain S, Katsyv A, Basen M, Muller V.	Extremophiles	10.1007/s00792-021-01251-y	2021
Pathogenicity	Growth-promoting effect on iron-sulfur proteins on axenic cultures of Entamoeba dispar.	Khalifa SA, Imai E, Kobayashi S, Haghighi A, Hayakawa E, Takeuchi T.	Parasite	10.1051/parasite/2006131051	2006
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Enzymology	A Third Way of Energy Conservation in Acetogenic Bacteria.	Kremp F, Roth J, Muller V.	Microbiol Spectr	10.1128/spectrum.01385-22	2022
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Metabolism	Flow-FISH analysis and isolation of clostridial strains in an anaerobic semi-solid bio-hydrogen producing system by hydrogenase gene target.	Jen CJ, Chou CH, Hsu PC, Yu SJ, Chen WE, Lay JJ, Huang CC, Wen FS.	Appl Microbiol Biotechnol	10.1007/s00253-006-0740-8	2007
Transcriptome	Metabolism, morphology and transcriptome analysis of oscillatory behavior of Clostridium butyricum during long-term continuous fermentation for 1,3-propanediol production.	Zhou JJ, Shen JT, Wang XL, Sun YQ, Xiu ZL.	Biotechnol Biofuels	10.1186/s13068-020-01831-8	2020
	Frequent Occurrence and Metabolic Versatility of Marinifilaceae Bacteria as Key Players in Organic Matter Mineralization in Global Deep Seas.	Li J, Dong C, Lai Q, Wang G, Shao Z.	mSystems	10.1128/msystems.00864-22	2022
Enzymology	An essential role of the reversible electron-bifurcating hydrogenase Hnd for ethanol oxidation in Solidesulfovibrio fructosivorans.	Kpebe A, Guendon C, Payne N, Ros J, Khelil Berbar M, Lebrun R, Baffert C, Shintu L, Brugna M.	Front Microbiol	10.3389/fmicb.2023.1139276	2023
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Enzymology	Capture of carbon dioxide and hydrogen by engineered Escherichia coli: hydrogen-dependent CO₂ reduction to formate.	Leo F, Schwarz FM, Schuchmann K, Muller V.	Appl Microbiol Biotechnol	10.1007/s00253-021-11463-z	2021
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Enzymology	A versatile and sensitive tritium-based radioassay for measuring hydrogenase activity in aquatic sediments.	Soffientino B, Spivack AJ, Smith DC, Roggenstein EB, D'Hondt S.	J Microbiol Methods	10.1016/j.mimet.2005.11.004	2006
Enzymology	Finding gas diffusion pathways in proteins: application to O2 and H2 transport in CpI [FeFe]-hydrogenase and the role of packing defects.	Cohen J, Kim K, King P, Seibert M, Schulten K.	Structure	10.1016/j.str.2005.05.013	2005
Metabolism	Identification and characterization of the cytoplasmic tungstate/molybdate-binding protein (Mop) from Eubacterium acidaminophilum.	Makdessi K, Fritsche K, Pich A, Andreesen JR.	Arch Microbiol	10.1007/s00203-003-0624-6	2004
Enzymology	Characterization of a HoxEFUYH type of [NiFe] hydrogenase from Allochromatium vinosum and some EPR and IR properties of the hydrogenase module.	Long M, Liu J, Chen Z, Bleijlevens B, Roseboom W, Albracht SP.	J Biol Inorg Chem	10.1007/s00775-006-0162-1	2007
Enzymology	Molecular Basis of the Electron Bifurcation Mechanism in the [FeFe]-Hydrogenase Complex HydABC.	Katsyv A, Kumar A, Saura P, Poverlein MC, Freibert SA, T Stripp S, Jain S, Gamiz-Hernandez AP, Kaila VRI, Muller V, Schuller JM.	J Am Chem Soc	10.1021/jacs.2c11683	2023
	Multicolor fluorescence imaging using a single RGB-IR CMOS sensor for cancer detection with smURFP-labeled probiotics.	Oh G, Cho HJ, Suh S, Lee D, Kim K.	Biomed Opt Express	10.1364/boe.391417	2020
	Diversification of Ferredoxins across Living Organisms.	Nzuza N, Padayachee T, Chen W, Gront D, Nelson DR, Syed K.	Curr Issues Mol Biol	10.3390/cimb43030098	2021
Metabolism	Fermentation of glycerol by Anaerobium acetethylicum and its potential use in biofuel production.	Patil Y, Junghare M, Muller N.	Microb Biotechnol	10.1111/1751-7915.12484	2017
Metabolism	Passive acquisition of ligand by the MopII molbindin from Clostridium pasteurianum: structures of apo and oxyanion-bound forms.	Schuttelkopf AW, Harrison JA, Boxer DH, Hunter WN.	J Biol Chem	10.1074/jbc.m201005200	2002
Enzymology	Selecting for lactic acid producing and utilising bacteria in anaerobic enrichment cultures.	Rombouts JL, Kranendonk EMM, Regueira A, Weissbrodt DG, Kleerebezem R, van Loosdrecht MCM.	Biotechnol Bioeng	10.1002/bit.27301	2020
Metabolism	The role of backbone stability near Ala44 in the high reduction potential class of rubredoxins.	Tan ML, Kang C, Ichiye T.	Proteins	10.1002/prot.20806	2006
Metabolism	Evidence for a synergistic salt-protein interaction -- complex patterns of activation vs. inhibition of nitrogenase by salt.	Wilson PE, Nyborg AC, Kenealey J, Lowery TJ, Crawford K, King CR, Engan AJ, Johnson JL, Watt GD.	Biophys Chem	10.1016/j.bpc.2006.03.007	2006
Enzymology	Molecular detection of the clostridia in an anaerobic biohydrogen fermentation system by hydrogenase mRNA-targeted reverse transcription-PCR.	Chang JJ, Chen WE, Shih SY, Yu SJ, Lay JJ, Wen FS, Huang CC.	Appl Microbiol Biotechnol	10.1007/s00253-005-0106-7	2006
	Inoculum composition determines microbial community and function in an anaerobic sequential batch reactor.	Perrotta AR, Kumaraswamy R, Bastidas-Oyanedel JR, Alm EJ, Rodriguez J.	PLoS One	10.1371/journal.pone.0171369	2017
Metabolism	Fermentative hydrogen production and bacterial community structure in high-rate anaerobic bioreactors containing silicone-immobilized and self-flocculated sludge.	Wu SY, Hung CH, Lin CN, Chen HW, Lee AS, Chang JS.	Biotechnol Bioeng	10.1002/bit.20800	2006
Metabolism	Fermentation of glycerol by Clostridium pasteurianum--batch and continuous culture studies.	Biebl H.	J Ind Microbiol Biotechnol	10.1038/sj.jim.7000155	2001
Metabolism	Mapping the interaction of the [2Fe-2S] Clostridium pasteurianum ferredoxin with nitrogenase MoFe protein.	Chatelet C, Meyer J.	Biochim Biophys Acta	10.1016/s0167-4838(01)00246-1	2001
Metabolism	Oxygen disruption of the 2[4Fe-4S] clusters in Clostridium pasteurianum ferredoxin shown by 1H-NMR.	Harklau H, Ljones T, Skjeldal L.	J Inorg Biochem	10.1016/s0162-0134(01)00197-0	2001
Enzymology	Infrared studies of the CO-inhibited form of the Fe-only hydrogenase from Clostridium pasteurianum I: examination of its light sensitivity at cryogenic temperatures.	Chen Z, Lemon BJ, Huang S, Swartz DJ, Peters JW, Bagley KA.	Biochemistry	10.1021/bi011510o	2002
	Molecular dynamics study of a hyperthermophilic and a mesophilic rubredoxin.	Grottesi A, Ceruso MA, Colosimo A, Di Nola A.	Proteins	10.1002/prot.10045	2002
	Contribution of the multi-turn segment in the reversible thermal stability of hyperthermophile rubredoxin: NMR thermal chemical exchange analysis of sequence hybrids.	LeMaster DM, Tang J, Paredes DI, Hernandez G.	Biophys Chem	10.1016/j.bpc.2005.01.010	2005
Metabolism	Analysis of metal incorporation during overexpression of Clostridium pasteurianum rubredoxin by electrospray FTICR mass spectrometry.	Taylor PK, Parks BA, Kurtz DM, Amster IJ.	J Biol Inorg Chem	10.1007/s007750000197	2001
Enzymology	[Cloning and expressing of 1,3-propanediol oxidoreductase-encoding gene].	Chi N, Liu C, Liu Y, Zhang Q, Zheng X.	Wei Sheng Wu Xue Bao		2003
	Online monitoring applying the anaerobic respiratory monitoring system reveals iron(II) limitation in YTF medium for Clostridium ljungdahlii.	Mann M, Wittke D, Buchs J.	Eng Life Sci	10.1002/elsc.202000054	2021
	A structural view of synthetic cofactor integration into [FeFe]-hydrogenases.	Esselborn J, Muraki N, Klein K, Engelbrecht V, Metzler-Nolte N, Apfel UP, Hofmann E, Kurisu G, Happe T.	Chem Sci	10.1039/c5sc03397g	2016
Enzymology	Substrate pathways in the nitrogenase MoFe protein by experimental identification of small molecule binding sites.	Morrison CN, Hoy JA, Zhang L, Einsle O, Rees DC.	Biochemistry	10.1021/bi501313k	2015
	O2 penetration and proton burial depth in proteins: applicability to fold family recognition.	Hernandez G, Teng CL, Bryant RG, LeMaster DM.	J Am Chem Soc	10.1021/ja017340k	2002
Metabolism	An NADH-dependent bacterial thioredoxin reductase-like protein in conjunction with a glutaredoxin homologue form a unique peroxiredoxin (AhpC) reducing system in Clostridium pasteurianum.	Reynolds CM, Meyer J, Poole LB.	Biochemistry	10.1021/bi011802p	2002
	Genetically Engineered Strains: Application and Advances for 1,3-Propanediol Production from Glycerol.	Yang M, Yun J, Zhang H, Magocha TA, Zabed H, Xue Y, Fokum E, Sun W, Qi X, Qi X.	Food Technol Biotechnol	10.17113/ftb.56.01.18.5444	2018
	5-Keto-D-Fructose, a Natural Diketone and Potential Sugar Substitute, Significantly Reduces the Viability of Prokaryotic and Eukaryotic Cells.	Hovels M, Gallala N, Keriakes SL, Konig AP, Schiessl J, Laporte T, Kosciow K, Deppenmeier U.	Front Microbiol	10.3389/fmicb.2022.935062	2022
Enzymology	Mechanism of proton transfer in [FeFe]-hydrogenase from Clostridium pasteurianum.	Cornish AJ, Gartner K, Yang H, Peters JW, Hegg EL.	J Biol Chem	10.1074/jbc.m111.254664	2011
	Redox properties of rubredoxin variants as a function of solvent composition and temperature: investigation of monopolar and dipolar interactions.	Zheng H, Kellog SJ, Erickson AE, Dubauskie NA, Smith ET.	J Biol Inorg Chem	10.1007/s00775-002-0380-0	2003
	Uptake and reduction of Se(IV) in two heterotrophic aerobic Pseudomonads strains isolated from boreal bog environment.	Lusa M, Knuutinen J, Bomberg M.	AIMS Microbiol	10.3934/microbiol.2017.4.798	2017
	Absence of kinetic thermal stabilization in a hyperthermophile rubredoxin indicated by 40 microsecond folding in the presence of irreversible denaturation.	LeMaster DM, Tang J, Hernandez G.	Proteins	10.1002/prot.20181	2004
Biotechnology	Development of Clostridium saccharoperbutylacetonicum as a Whole Cell Biocatalyst for Production of Chirally Pure (R)-1,3-Butanediol.	Grosse-Honebrink A, Little GT, Bean Z, Heldt D, Cornock RHM, Winzer K, Minton NP, Green E, Zhang Y.	Front Bioeng Biotechnol	10.3389/fbioe.2021.659895	2021
	Structural basis for thermostability in aporubredoxins from Pyrococcus furiosus and Clostridium pasteurianum.	Zartler ER, Jenney FE, Terrell M, Eidsness MK, Adams MW, Prestegard JH.	Biochemistry	10.1021/bi0026831	2001
	Thermal stability of the [Fe(SCys)(4)] site in Clostridium pasteurianum rubredoxin: contributions of the local environment and Cys ligand protonation.	Bonomi F, Burden AE, Eidsness MK, Fessas D, Iametti S, Kurtz DM, Mazzini S, Scott RA, Zeng Q.	J Biol Inorg Chem	10.1007/s00775-001-0314-2	2002
	Activation of a passive, mesoporous silica nanoparticle layer through attachment of bacterially-derived carbon-quantum-dots for protection and functional enhancement of probiotics.	Wei H, Geng W, Yang XY, Kuipers J, van der Mei HC, Busscher HJ.	Mater Today Bio	10.1016/j.mtbio.2022.100293	2022
	Improvement of glycine biosynthesis from one-carbon compounds and ammonia catalyzed by the glycine cleavage system in vitro.	Xu Y, Ren J, Wang W, Zeng AP.	Eng Life Sci	10.1002/elsc.202100047	2022
	A scanning tunnelling microscopy study of Clostridium pasteurianum rubredoxin.	Mukhopadhyay R, Davis JJ, Kyritsis P, Hill HA, Meyer J.	J Inorg Biochem	10.1016/s0162-0134(00)00016-7	2000
	Paramagnetic NMR spectroscopy and density functional calculations in the analysis of the geometric and electronic structures of iron-sulfur proteins.	Machonkin TE, Westler WM, Markley JL.	Inorg Chem	10.1021/ic048624j	2005
Metabolism	Investigations of the oxidative disassembly of Fe-S clusters in Clostridium pasteurianum 8Fe ferredoxin using pulsed-protein-film voltammetry.	Camba R, Armstrong FA.	Biochemistry	10.1021/bi000832+	2000
Enzymology	Biochemical Function, Molecular Structure and Evolution of an Atypical Thioredoxin Reductase from Desulfovibrio vulgaris.	Valette O, Tran TTT, Cavazza C, Caudeville E, Brasseur G, Dolla A, Talla E, Pieulle L.	Front Microbiol	10.3389/fmicb.2017.01855	2017
Enzymology	Electron carriers involved in autotrophic and heterotrophic acetogenesis in the thermophilic bacterium Thermoanaerobacter kivui.	Katsyv A, Jain S, Basen M, Muller V.	Extremophiles	10.1007/s00792-021-01247-8	2021
	Mössbauer, EPR, and MCD studies of the C9S and C42S variants of Clostridium pasteurianum rubredoxin and MDC studies of the wild-type protein.	Yoo SJ, Meyer J, Achim C, Peterson J, Hendrich MP, Munck E.	J Biol Inorg Chem	10.1007/s007750050008	2000
Enzymology	Mechanistic interpretation of the dilution effect for Azotobacter vinelandii and Clostridium pasteurianum nitrogenase catalysis.	Johnson JL, Nyborg AC, Wilson PE, Tolley AM, Nordmeyer FR, Watt GD.	Biochim Biophys Acta	10.1016/s0167-4838(00)00196-5	2000
Transcriptome	Two-dimensional gel electrophoresis separation and N-terminal sequence analysis of proteins from Clostridium pasteurianum W5.	Flengsrud R, Skjeldal L.	Electrophoresis	10.1002/elps.1150190533	1998
	Mutation of the surface valine residues 8 and 44 in the rubredoxin from Clostridium pasteurianum: solvent access versus structural changes as determinants of reversible potential.	Xiao Z, Maher MJ, Cross M, Bond CS, Guss JM, Wedd AG.	J Biol Inorg Chem	10.1007/pl00010656	2000
Phylogeny	Identification of Clostridium spp. derived from a sheep and cattle slaughterhouse by matrix-assisted laser desorption and ionization-time of flight mass spectrometry (MALDI-TOF MS) and 16S rDNA sequencing.	Bakhtiary F, Sayevand HR, Remely M, Hippe B, Indra A, Hosseini H, Haslberger AG.	J Food Sci Technol	10.1007/s13197-018-3255-2	2018
	Current Progress in Nitrogen Fixing Plants and Microbiome Research.	Mahmud K, Makaju S, Ibrahim R, Missaoui A.	Plants (Basel)	10.3390/plants9010097	2020
Enzymology	Binding of exogenously added carbon monoxide at the active site of the iron-only hydrogenase (CpI) from Clostridium pasteurianum.	Lemon BJ, Peters JW.	Biochemistry	10.1021/bi9913193	1999
	Molecular Evolution and Functional Analysis of Rubredoxin-Like Proteins in Plants.	Li Y, Liu PP, Ni X.	Biomed Res Int	10.1155/2019/2932585	2019
Enzymology	Electronic Structure of Two Catalytic States of the [FeFe] Hydrogenase H-Cluster As Probed by Pulse Electron Paramagnetic Resonance Spectroscopy.	Rao G, Britt RD.	Inorg Chem	10.1021/acs.inorgchem.8b01557	2018
Metabolism	Fate of nitrogen-fixing bacteria in crude oil contaminated wetland ultisol.	John RC, Itah AY, Essien JP, Ikpe DI.	Bull Environ Contam Toxicol	10.1007/s00128-011-0320-1	2011
	Hydrogen bonds in rubredoxins from mesophilic and hyperthermophilic organisms.	Bougault CM, Eidsness MK, Prestegard JH.	Biochemistry	10.1021/bi027264d	2003
	Variation of molecular alignment as a means of resolving orientational ambiguities in protein structures from dipolar couplings.	Al-Hashimi HM, Valafar H, Terrell M, Zartler ER, Eidsness MK, Prestegard JH.	J Magn Reson	10.1006/jmre.2000.2049	2000
Metabolism	The [2Fe-2S] protein I (Shetna protein I) from Azotobacter vinelandii is homologous to the [2Fe-2S] ferredoxin from Clostridium pasteurianum.	Chatelet C, Meyer J.	J Biol Inorg Chem	10.1007/s007750050317	1999
	Mechanism of O₂ diffusion and reduction in FeFe hydrogenases.	Kubas A, Orain C, De Sancho D, Saujet L, Sensi M, Gauquelin C, Meynial-Salles I, Soucaille P, Bottin H, Baffert C, Fourmond V, Best RB, Blumberger J, Leger C.	Nat Chem	10.1038/nchem.2592	2017
Metabolism	Formation of a tight 1:1 complex of Clostridium pasteurianum Fe protein-Azotobacter vinelandii MoFe protein: evidence for long-range interactions between the Fe protein binding sites during catalytic hydrogen evolution.	Clarke TA, Maritano S, Eady RR.	Biochemistry	10.1021/bi0002939	2000
Enzymology	Properties and sequence of the coenzyme B12-dependent glycerol dehydratase of Clostridium pasteurianum.	Macis L, Daniel R, Gottschalk G.	FEMS Microbiol Lett	10.1111/j.1574-6968.1998.tb13062.x	1998
Metabolism	Lyophilization protects [FeFe]-hydrogenases against O2-induced H-cluster degradation.	Noth J, Kositzki R, Klein K, Winkler M, Haumann M, Happe T.	Sci Rep	10.1038/srep13978	2015
Enzymology	Evidence that MgATP accelerates primary electron transfer in a Clostridium pasteurianum Fe protein-Azotobacter vinelandii MoFe protein nitrogenase tight complex.	Chan JM, Ryle MJ, Seefeldt LC.	J Biol Chem	10.1074/jbc.274.25.17593	1999
Metabolism	Novel EPR signals associated with FeMoco centres of MoFe protein in MgADP-inhibited turnover of nitrogenase.	Maritano S, Fairhurst SA, Eady RR.	FEBS Lett	10.1016/s0014-5793(01)02800-9	2001
	A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.	Chatake T, Kurihara K, Tanaka I, Tsyba I, Bau R, Jenney FE, Adams MW, Adams MW, Niimura N.	Acta Crystallogr D Biol Crystallogr	10.1107/s090744490401176x	2004
	A novel type of DNA curvature present in a Clostridium perfringens ferredoxin gene: characterization and role in gene expression.	Kaji M, Matsushita O, Tamai E, Miyata S, Taniguchi Y, Shimamoto S, Katayama S, Morita S, Okabe A.	Microbiology (Reading)	10.1099/mic.0.26503-0	2003
	Endogenous CRISPR/Cas systems for genome engineering in the acetogens Acetobacterium woodii and Clostridium autoethanogenum.	Poulalier-Delavelle M, Baker JP, Millard J, Winzer K, Minton NP.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1213236	2023
Enzymology	X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution.	Peters JW, Lanzilotta WN, Lemon BJ, Seefeldt LC.	Science	10.1126/science.282.5395.1853	1998
Metabolism	Caught in the H_inact : Crystal Structure and Spectroscopy Reveal a Sulfur Bound to the Active Site of an O₂ -stable State of [FeFe] Hydrogenase.	Rodriguez-Macia P, Galle LM, Bjornsson R, Lorent C, Zebger I, Yoda Y, Cramer SP, DeBeer S, Span I, Birrell JA.	Angew Chem Int Ed Engl	10.1002/anie.202005208	2020
Metabolism	A journey into the active center of nitrogenase.	Hu Y, Ribbe MW.	J Biol Inorg Chem	10.1007/s00775-014-1137-2	2014
	Molecular dynamics simulation of interaction of histone-like protein of mycobacterium tuberculosis (Hlpmt) and histone of clostridium pasteurianum (DBHclopa) with 35 based paired GC rich U-bend DNA.	Kothekar V, Raha K, Prasad HK.	J Biomol Struct Dyn	10.1080/07391102.1998.10508241	1998
	Reduced temperature dependence of collective conformational opening in a hyperthermophile rubredoxin.	Hernandez G, LeMaster DM.	Biochemistry	10.1021/bi0112560	2001
Metabolism	Contribution of the [FeII(SCys)4] site to the thermostability of rubredoxins.	Bonomi F, Eidsness MK, Iametti S, Kurtz DM, Mazzini S, Morleo A.	J Biol Inorg Chem	10.1007/s00775-004-0525-4	2004
	Iron-regulated assembly of the cytosolic iron-sulfur cluster biogenesis machinery.	Fan X, Barshop WD, Vashisht AA, Pandey V, Leal S, Rayatpisheh S, Jami-Alahmadi Y, Sha J, Wohlschlegel JA.	J Biol Chem	10.1016/j.jbc.2022.102094	2022
	Paramagnetic relaxation as a tool for solution structure determination: Clostridium pasteurianum ferredoxin as an example.	Bertini I, Donaire A, Luchinat C, Rosato A.	Proteins	10.1002/(sici)1097-0134(199711)29:3<348::aid-prot8>3.0.co;2-6	1997
	The crystalline state as a dynamic system: IR microspectroscopy under electrochemical control for a [NiFe] hydrogenase.	Ash PA, Kendall-Price SET, Evans RM, Carr SB, Brasnett AR, Morra S, Rowbotham JS, Hidalgo R, Healy AJ, Cinque G, Frogley MD, Armstrong FA, Vincent KA.	Chem Sci	10.1039/d1sc01734a	2021
Metabolism	Energy conservation by a hydrogenase-dependent chemiosmotic mechanism in an ancient metabolic pathway.	Schoelmerich MC, Muller V.	Proc Natl Acad Sci U S A	10.1073/pnas.1818580116	2019
Enzymology	Structural similarities between the N-terminal domain of Clostridium pasteurianum hydrogenase and plant-type ferredoxins.	Kummerle R, Atta M, Scuiller J, Gaillard J, Meyer J.	Biochemistry	10.1021/bi982416j	1999
Metabolism	Investigation of the role of surface residues in the ferredoxin from Clostridium pasteurianum.	Brereton PS, Maher MJ, Tregloan PA, Wedd AG.	Biochim Biophys Acta	10.1016/s0167-4838(98)00197-6	1999
Enzymology	The Mechanism of Metal-Containing Formate Dehydrogenases Revisited: The Formation of Bicarbonate as Product Intermediate Provides Evidence for an Oxygen Atom Transfer Mechanism.	Kumar H, Khosraneh M, Bandaru SSM, Schulzke C, Leimkuhler S.	Molecules	10.3390/molecules28041537	2023
Metabolism	Glycerol conversion to 1,3-propanediol by Clostridium pasteurianum: cloning and expression of the gene encoding 1,3-propanediol dehydrogenase.	Luers F, Seyfried M, Daniel R, Gottschalk G.	FEMS Microbiol Lett	10.1111/j.1574-6968.1997.tb12665.x	1997
Metabolism	Rubredoxin from Clostridium pasteurianum. Structures of G10A, G43A and G10VG43A mutant proteins. Mutation of conserved glycine 10 to valine causes the 9-10 peptide link to invert.	Maher MJ, Xiao Z, Wilce MC, Guss JM, Wedd AG.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444999001900	1999
Metabolism	Comparative genomic analysis of dha regulon and related genes for anaerobic glycerol metabolism in bacteria.	Sun J, van den Heuvel J, Soucaille P, Qu Y, Zeng AP.	Biotechnol Prog	10.1021/bp025739m	2003
	Expanding the repertoire of gene tools for precise manipulation of the Clostridium difficile genome: allelic exchange using pyrE alleles.	Ng YK, Ehsaan M, Philip S, Collery MM, Janoir C, Collignon A, Cartman ST, Minton NP.	PLoS One	10.1371/journal.pone.0056051	2013
Metabolism	Structure and mechanism of iron-only hydrogenases.	Peters JW.	Curr Opin Struct Biol	10.1016/s0959-440x(99)00028-7	1999
Enzymology	Heterologous biosynthesis and characterization of the [2Fe-2S]-containing N-terminal domain of Clostridium pasteurianum hydrogenase.	Atta M, Lafferty ME, Johnson MK, Gaillard J, Meyer J.	Biochemistry	10.1021/bi9812928	1998
	Development and characterization of a glycine biosensor system for fine-tuned metabolic regulation in Escherichia coli.	Hong KQ, Zhang J, Jin B, Chen T, Wang ZW.	Microb Cell Fact	10.1186/s12934-022-01779-4	2022
Metabolism	Mössbauer study of reduced rubredoxin as purified and in whole cells. Structural correlation analysis of spin Hamiltonian parameters.	Vrajmasu VV, Bominaar EL, Meyer J, Munck E.	Inorg Chem	10.1021/ic020508y	2002
Metabolism	Extensive ligand rearrangements around the [2Fe-2S] cluster of Clostridium pasteurianum ferredoxin.	Golinelli MP, Chatelet C, Duin EC, Johnson MK, Meyer J.	Biochemistry	10.1021/bi9806394	1998
Metabolism	The Rnf complex is a Na⁺ coupled respiratory enzyme in a fermenting bacterium, Thermotoga maritima.	Kuhns M, Trifunovic D, Huber H, Muller V.	Commun Biol	10.1038/s42003-020-01158-y	2020
Transcriptome	Increased Butyrate Production in Clostridium saccharoperbutylacetonicum from Lignocellulose-Derived Sugars.	Baur ST, Markussen S, Di Bartolomeo F, Poehlein A, Baker A, Jenkinson ER, Daniel R, Wentzel A, Durre P.	Appl Environ Microbiol	10.1128/aem.02419-21	2022
Enzymology	Conformationally Gated Electron Transfer in Nitrogenase. Isolation, Purification, and Characterization of Nitrogenase From Gluconacetobacter diazotrophicus.	Owens CP, Tezcan FA.	Methods Enzymol	10.1016/bs.mie.2017.09.007	2018
Metabolism	Alanine, a Novel Growth Substrate for the Acetogenic Bacterium Acetobacterium woodii.	Donig J, Muller V.	Appl Environ Microbiol	10.1128/aem.02023-18	2018
Enzymology	Conformational variability in structures of the nitrogenase iron proteins from Azotobacter vinelandii and Clostridium pasteurianum.	Schlessman JL, Woo D, Joshua-Tor L, Howard JB, Rees DC.	J Mol Biol	10.1006/jmbi.1998.1898	1998
	How [FeFe]-Hydrogenase Facilitates Bidirectional Proton Transfer.	Senger M, Eichmann V, Laun K, Duan J, Wittkamp F, Knor G, Apfel UP, Happe T, Winkler M, Heberle J, Stripp ST.	J Am Chem Soc	10.1021/jacs.9b09225	2019
Metabolism	Nitrogen-fixation genes and nitrogenase activity in Clostridium acetobutylicum and Clostridium beijerinckii.	Chen JS, Toth J, Kasap M.	J Ind Microbiol Biotechnol	10.1038/sj.jim.7000083	2001
Metabolism	Specific interaction of the [2Fe-2S] ferredoxin from Clostridium pasteurianum with the nitrogenase MoFe protein.	Golinelli MP, Gagnon J, Meyer J.	Biochemistry	10.1021/bi970528p	1997
	Purification and characterization of the 1-3-propanediol dehydrogenase of Clostridium butyricum E5.	Malaoui H, Marczak R.	Enzyme Microb Technol	10.1016/s0141-0229(00)00219-2	2000
	Factors and Conditions That Impact Electroporation of Clostridioides difficile Strains.	Bhattacharjee D, Sorg JA.	mSphere	10.1128/msphere.00941-19	2020
Metabolism	The influence of conserved aromatic residues on the electron transfer reactivity of 2[4Fe-4S] ferredoxins.	Quinkal I, Kyritsis P, Kohzuma T, Im SC, Sykes AG, Moulis JM.	Biochim Biophys Acta	10.1016/0167-4838(96)00042-8	1996
Metabolism	Primers and a specific DNA probe for detecting lactic acid bacteria producing 3-hydroxypropionaldehyde from glycerol in spoiled ciders.	Claisse O, Lonvaud-Funel A.	J Food Prot	10.4315/0362-028x-64.6.833	2001
Enzymology	Characterization of D-xylonate dehydratase YjhG from Escherichia coli.	Jiang Y, Liu W, Cheng T, Cao Y, Zhang R, Xian M.	Bioengineered	10.1080/21655979.2015.1040208	2015
	Removal of a cysteine ligand from rubredoxin: assembly of Fe(2)S(2) and Fe(S-Cys)(3)(OH) centres.	Cross M, Xiao Z, Maes EM, Czernuszewicz RS, Drew SC, Pilbrow JR, George GN, Wedd AG.	J Biol Inorg Chem	10.1007/s00775-002-0355-1	2002
Metabolism	Assembly of a [2Fe-2S]2+ cluster in a molecular variant of Clostridium pasteurianum rubredoxin.	Meyer J, Gagnon J, Gaillard J, Lutz M, Achim C, Munck E, Petillot Y, Colangelo CM, Scott RA.	Biochemistry	10.1021/bi971775w	1997
	Heterologous expression of clostridial hydrogenase in the Cyanobacterium synechococcus PCC7942.	Asada Y, Koike Y, Schnackenberg J, Miyake M, Uemura I, Miyake J.	Biochim Biophys Acta	10.1016/s0167-4781(00)00010-5	2000
	A safety cap protects hydrogenase from oxygen attack.	Winkler M, Duan J, Rutz A, Felbek C, Scholtysek L, Lampret O, Jaenecke J, Apfel UP, Gilardi G, Valetti F, Fourmond V, Hofmann E, Leger C, Happe T.	Nat Commun	10.1038/s41467-020-20861-2	2021
Metabolism	Genome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeum.	Oehler D, Poehlein A, Leimbach A, Muller N, Daniel R, Gottschalk G, Schink B.	BMC Genomics	10.1186/1471-2164-13-723	2012
Enzymology	Nuclear resonance vibrational spectroscopy and electron paramagnetic resonance spectroscopy of 57Fe-enriched [FeFe] hydrogenase indicate stepwise assembly of the H-cluster.	Kuchenreuther JM, Guo Y, Wang H, Myers WK, George SJ, Boyke CA, Yoda Y, Alp EE, Zhao J, Britt RD, Swartz JR, Cramer SP.	Biochemistry	10.1021/bi301336r	2013
Enzymology	Molecular mechanism of pyruvate-ferredoxin oxidoreductases based on data obtained with the Clostridium pasteurianum enzyme.	Moulis JM, Davasse V, Meyer J, Gaillard J.	FEBS Lett	10.1016/0014-5793(96)00062-2	1996
Metabolism	Docking and migration of carbon monoxide in nitrogenase: the case for gated pockets from infrared spectroscopy and molecular dynamics.	Gee LB, Leontyev I, Stuchebrukhov A, Scott AD, Pelmenschikov V, Cramer SP.	Biochemistry	10.1021/acs.biochem.5b00216	2015
Enzymology	Identification and expression of the genes and purification and characterization of the gene products involved in reactivation of coenzyme B12-dependent glycerol dehydratase of Citrobacter freundii.	Seifert C, Bowien S, Gottschalk G, Daniel R.	Eur J Biochem	10.1046/j.1432-1327.2001.02123.x	2001
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Metabolism	The hydA gene encoding the H(2)-evolving hydrogenase of Clostridium perfringens: molecular characterization and expression of the gene.	Kaji M, Taniguchi Y, Matsushita O, Katayama S, Miyata S, Morita S, Okabe A.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb08863.x	1999
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Metabolism	De novo design of symmetric ferredoxins that shuttle electrons in vivo.	Mutter AC, Tyryshkin AM, Campbell IJ, Poudel S, Bennett GN, Silberg JJ, Nanda V, Falkowski PG.	Proc Natl Acad Sci U S A	10.1073/pnas.1905643116	2019
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Metabolism	Some structural features of cluster-coordinating cysteines of Clostridium pasteurianum ferredoxin are revealed by 2D TOCSY 1H NMR on the oxidized protein.	Acquotti D, Bonomi F, Brocca P, Ganadu ML, Pagani S.	Biochem Biophys Res Commun	10.1006/bbrc.1994.1969	1994
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Metabolism	Expression of heterologous sigma factors enables functional screening of metagenomic and heterologous genomic libraries.	Gaida SM, Sandoval NR, Nicolaou SA, Chen Y, Venkataramanan KP, Papoutsakis ET.	Nat Commun	10.1038/ncomms8045	2015
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	Characterization of a putative sensory [FeFe]-hydrogenase provides new insight into the role of the active site architecture.	Land H, Sekretareva A, Huang P, Redman HJ, Nemeth B, Polidori N, Meszaros LS, Senger M, Stripp ST, Berggren G.	Chem Sci	10.1039/d0sc03319g	2020
Metabolism	The eight-amino acid internal loop of PSI-C mediates association of low molecular mass iron-sulfur proteins with the P700-FX core in photosystem I.	Naver H, Scott MP, Golbeck JH, Olsen CE, Scheller HV.	J Biol Chem	10.1074/jbc.273.30.18778	1998
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Metabolism	[FeFe]-hydrogenase abundance and diversity along a vertical redox gradient in Great Salt Lake, USA.	Boyd ES, Hamilton TL, Swanson KD, Howells AE, Baxter BK, Meuser JE, Posewitz MC, Peters JW.	Int J Mol Sci	10.3390/ijms151221947	2014
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Metabolism	Electrospray-ionization mass spectrometry of molecular variants of a [2Fe-2S] ferredoxin.	Petillot Y, Golinelli MP, Forest E, Meyer J.	Biochem Biophys Res Commun	10.1006/bbrc.1995.1714	1995
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Metabolism	Genome analysis to decipher syntrophy in the bacterial consortium 'SCP' for azo dye degradation.	Nanjani S, Paul D, Keharia H.	BMC Microbiol	10.1186/s12866-021-02236-9	2021
Enzymology	A hybrid Azotobacter vinelandii-Clostridium pasteurianum nitrogenase iron protein that has in vivo and in vitro catalytic activity.	Jacobson MR, Cantwell JS, Dean DR.	J Biol Chem	10.1016/s0021-9258(17)45390-7	1990
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Enzymology	Structural homologies between the amino acid sequence of Clostridium pasteurianum MoFe protein and the DNA sequences of nifD and K genes of phylogenetically diverse bacteria.	Hase T, Wakabayashi S, Nakano T, Zumft WG, Matsubara H.	FEBS Lett	10.1016/0014-5793(84)80040-x	1984
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Enzymology	Purification and characterization of the pyruvate-ferredoxin oxidoreductase from Clostridium acetobutylicum.	Meinecke B, Bertram J, Gottschalk G.	Arch Microbiol	10.1007/bf00409658	1989
Metabolism	Determinants of protein hyperthermostability: purification and amino acid sequence of rubredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus and secondary structure of the zinc adduct by NMR.	Blake PR, Park JB, Bryant FO, Aono S, Magnuson JK, Eccleston E, Howard JB, Summers MF, Adams MW.	Biochemistry	10.1021/bi00109a012	1991
Metabolism	Kinetics of reduction of high redox potential ferredoxins by the semiquinones of Clostridium pasteurianum flavodoxin and exogenous flavin mononucleotide. Electrostatic and redox potential effects.	Przysiecki CT, Cheddar G, Meyer TE, Tollin G, Cusanovich MA.	Biochemistry	10.1021/bi00341a054	1985
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Metabolism	Investigation of availability of a high throughput screening method for predicting butanol solvent -producing ability of Clostridium beijerinckii.	Su H, Zhu J, Liu G, Tan F.	BMC Microbiol	10.1186/s12866-016-0776-6	2016
Metabolism	Characterization of Hydrogen Metabolism in the Multicellular Green Alga Volvox carteri.	Cornish AJ, Green R, Gartner K, Mason S, Hegg EL.	PLoS One	10.1371/journal.pone.0125324	2015
Metabolism	Laser flash photolysis studies of the kinetics of reduction of spinach and Clostridium ferredoxins by a viologen analogue: electrostatically controlled nonproductive complex formation and differential reactivity among the iron-sulfur clusters.	Navarro JA, Cheddar G, Tollin G.	Biochemistry	10.1021/bi00440a050	1989
Metabolism	Origin of the pH dependence of the midpoint reduction potential in Clostridium pasteurianum ferredoxin:oxidation state-dependent hydrogen ion association.	Magliozzo RS, McIntosh BA, Sweeney WV.	J Biol Chem	10.1016/s0021-9258(18)34807-5	1982
Pathogenicity	Butyricin 7423 and the membrane H+ -ATPase of Clostridium pasteurianum.	Clarke DJ, Kell DB, Morley CD, Morris JG.	Arch Microbiol	10.1007/bf00451503	1982
Metabolism	High-yield expression of heterologous [FeFe] hydrogenases in Escherichia coli.	Kuchenreuther JM, Grady-Smith CS, Bingham AS, George SJ, Cramer SP, Swartz JR.	PLoS One	10.1371/journal.pone.0015491	2010
Metabolism	Stable isotope fractionation by Clostridium pasteurianum. 4. Sulfur isotope fractionation during enzymatic S3O6(2-), S2O3(2-), and SO3(2-) reductions.	Harrison GI, Laishley EJ, Krouse HR.	Can J Microbiol	10.1139/m81-127	1981
Metabolism	Characterization of the selenium-substituted 2 [4Fe-4Se] ferredoxin from Clostridium pasteurianum.	Moulis JM, Meyer J.	Biochemistry	10.1021/bi00262a037	1982
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Metabolism	Resonance Raman and electron paramagnetic resonance studies on oxidized and ferricyanide-treated Clostridium pasteurianum ferredoxin. Vibrational assignments from 34S shifts and evidence for conversion of 4 to 3 iron-sulfur clusters via oxidative damage. Vibrational assignments from 34S shifts and evidence for conversion of 4 to 3 iron-sulfur clusters via oxidative damage.	Johnson MK, Spiro TG, Mortenson LE.	J Biol Chem	10.1016/s0021-9258(18)34944-5	1982
Metabolism	Some properties of a new electrogenic transport system: the ammonium (methylammonium) carrier from Clostridium pasteurianum.	Kleiner D, Fitzke E.	Biochim Biophys Acta	10.1016/0005-2736(81)90577-0	1981
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Metabolism	Germinants and Their Receptors in Clostridia.	Bhattacharjee D, McAllister KN, Sorg JA.	J Bacteriol	10.1128/jb.00405-16	2016
Metabolism	Light induced H2 evolution in a hydrogenase-TiO2 particle system by direct electron transfer or via rhodium complexes.	Cuendet P, Rao KK, Gratzel M, Hall DO.	Biochimie	10.1016/s0300-9084(86)81086-0	1986
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Metabolism	Thiosulfate formation and associated isotope effects during sulfite reduction by Clostridium pasteurianum.	Chambers LA, Trudinger PA.	Can J Microbiol	10.1139/m79-104	1979
Enzymology	A cell-free microtiter plate screen for improved [FeFe] hydrogenases.	Stapleton JA, Swartz JR.	PLoS One	10.1371/journal.pone.0010554	2010
Metabolism	Adaptive Evolution of Geobacter sulfurreducens in Coculture with Pseudomonas aeruginosa.	Semenec L, Vergara IA, Laloo AE, Petrovski S, Bond PL, Franks AE.	mBio	10.1128/mbio.02875-19	2020
Enzymology	Nitrogenase XII. Mössbauer studies of the MoFe protein from Clostridium pasteurianum W5.	Huynh BH, Henzl MT, Christner JA, Zimmermann R, Orme-Johnson WH, Munck E.	Biochim Biophys Acta	10.1016/0005-2795(80)90015-x	1980
Metabolism	Flavodoxin-cytochrome c interactions: circular dichroism and nuclear magnetic resonance studies.	Tollin G, Brown K, De Francesco R, Edmondson DE.	Biochemistry	10.1021/bi00390a024	1987
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Metabolism	Stable isotope fractionation by Clostridium pasteurianum. 3. Effect of SeO32- on the physiology and associated sulfur isotope fractionation during SO32- and SO42- reductions.	Harrison GI, Laishley EJ, Krouse HR.	Can J Microbiol	10.1139/m80-162	1980
Metabolism	Isolation and characterization of rubrerythrin, a non-heme iron protein from Desulfovibrio vulgaris that contains rubredoxin centers and a hemerythrin-like binuclear iron cluster.	LeGall J, Prickril BC, Moura I, Xavier AV, Moura JJ, Huynh BH.	Biochemistry	10.1021/bi00405a037	1988
Metabolism	Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.	Min T, Ergenekan CE, Eidsness MK, Ichiye T, Kang C.	Protein Sci	10.1110/gad.34501	2001
Metabolism	The interaction of polymeric viologens with hydrogenases from Desulfovibrio desulfuricans and Clostridium pasteurianum.	Glick BR, Martin WG, Giroux JJ, Williams RE.	Can J Biochem	10.1139/o79-140	1979
Metabolism	Respiratory Pathways Reconstructed by Multi-Omics Analysis in Melioribacter roseus, Residing in a Deep Thermal Aquifer of the West-Siberian Megabasin.	Gavrilov S, Podosokorskaya O, Alexeev D, Merkel A, Khomyakova M, Muntyan M, Altukhov I, Butenko I, Bonch-Osmolovskaya E, Govorun V, Kublanov I.	Front Microbiol	10.3389/fmicb.2017.01228	2017
Pathogenicity	On the mode of action of the bacteriocin butyricin 7423. Effects on membrane potential and potassium-ion accumulation in Clostridium pasteurianum.	Clarke DJ, Morley CD, Kell DB, Morris JG.	Eur J Biochem	10.1111/j.1432-1033.1982.tb06843.x	1982
Enzymology	[Fe-Fe]-hydrogenase Reactivated by Residue Mutations as Bridging Carbonyl Rearranges: A QM/MM Study.	Motiu S, Gogonea V.	Int J Quantum Chem	10.1002/qua.22381	2010
Enzymology	Resonance Raman spectroscopy of Azotobacter vinelandii ferredoxin I. Vibrational features of the [3Fe-3S] cluster.	Lutz M, Moulis JM, Meyer J.	FEBS Lett	10.1016/0014-5793(83)80821-7	1983
Enzymology	Nucleotide sequence of regions homologous to nifH (nitrogenase Fe protein) from the nitrogen-fixing archaebacteria Methanococcus thermolithotrophicus and Methanobacterium ivanovii: evolutionary implications.	Souillard N, Magot M, Possot O, Sibold L.	J Mol Evol	10.1007/bf02099731	1988
Metabolism	Ferredoxin degradation in growing Clostridium pasteurianum during periods of iron deprivation.	Schonheit P, Brandis A, Thauer RK.	Arch Microbiol	10.1007/bf00413277	1979
Metabolism	Oxidative inactivation of the molybdenum-iron-protein component of nitrogenase from clostridium pasteurianum.	Gomez-Moreno C, Ke B.	Mol Cell Biochem	10.1007/bf00232888	1979
Enzymology	Hydrogenase from Acetobacterium woodii.	Ragsdale SW, Ljungdahl LG.	Arch Microbiol	10.1007/bf00408380	1984
Enzymology	Identification and characterization of coenzyme B12-dependent glycerol dehydratase- and diol dehydratase-encoding genes from metagenomic DNA libraries derived from enrichment cultures.	Knietsch A, Bowien S, Whited G, Gottschalk G, Daniel R.	Appl Environ Microbiol	10.1128/aem.69.6.3048-3060.2003	2003
Enzymology	Effect of high pN2 and high pD2 on NH3 production, H2 evolution, and HD formation by nitrogenases.	Jensen BB, Burris RH.	Biochemistry	10.1021/bi00326a012	1985
Phylogeny	Rhizosphere Microbiomes of European + Seagrasses Are Selected by the Plant, But Are Not Species Specific.	Cucio C, Engelen AH, Costa R, Muyzer G.	Front Microbiol	10.3389/fmicb.2016.00440	2016
	Assignment of the cysteinyl 13C nuclear magnetic resonances and comparison of other aliphatic amino acid resonances of Clostridium acidi-urici, Clostridium pasteurianum, and Peptococcus aerogenes ferredoxins.	Packer EL, Rabinowitz JC, Sternlicht H.	J Biol Chem	10.1016/s0021-9258(17)34429-0	1978
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Enzymology	Purification and properties of nitrate reductase from Mitsuokella multiacidus.	Yamamoto I, Shimizu H, Tsuji T, Ishimoto M.	J Biochem	10.1093/oxfordjournals.jbchem.a135559	1986
	Low-temperature magnetic circular dichroism spectra and magnetisation curves of 4Fe clusters in iron-sulphur proteins from Chromatium and Clostridium pasteurianum.	Johnson MK, Thomson AJ, Robinson AE, Rao KK, Hall DO.	Biochim Biophys Acta	10.1016/0005-2795(81)90209-9	1981
Metabolism	The kinetics of methyl viologen oxidation and reduction by the hydrogenase from Clostridium pasteurianum.	Erbes DL, Burris RH.	Biochim Biophys Acta	10.1016/0005-2744(78)90198-5	1978
Metabolism	Electron-transfer reactions between flavodoxin semiquinone and c-type cytochromes: comparisons between various flavodoxins.	Cheddar G, Meyer TE, Cusanovich MA, Stout CD, Tollin G.	Biochemistry	10.1021/bi00369a024	1986
Enzymology	Influence of pN2 and pD2 on HD formation by various nitrogenases.	Li JL, Burris RH.	Biochemistry	10.1021/bi00288a019	1983
Metabolism	Stable isotope fractionation by Clostridium pasteurianum. 2. Regulation of sulfite reductases by sulfur amino acids and their influence on sulfur isotope fractionation during SO32- and SO42- reduction.	Laishley EJ, Krouse HR.	Can J Microbiol	10.1139/m78-120	1978
Metabolism	Purification and characterization of 2-oxoglutarate:ferredoxin oxidoreductase from a thermophilic, obligately chemolithoautotrophic bacterium, Hydrogenobacter thermophilus TK-6.	Yoon KS, Ishii M, Igarashi Y, Kodama T.	J Bacteriol	10.1128/jb.178.11.3365-3368.1996	1996
Metabolism	The Involvement of hybrid cluster protein 4, HCP4, in Anaerobic Metabolism in Chlamydomonas reinhardtii.	Olson AC, Carter CJ.	PLoS One	10.1371/journal.pone.0149816	2016
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Metabolism	The intracellular reserve polysaccharide of Clostridium pasteurianum.	Darvill AG, Hall MA, Fish JP, Morris JG.	Can J Microbiol	10.1139/m77-141	1977
Metabolism	The use of stable sulfur isotope labelling to elucidate sulfur metabolism by Clostridium pasteurianum.	McCready RG, Laishley EJ, Krouse HR.	Arch Microbiol	10.1007/bf00446644	1976
Biotechnology	The use of the carbon/nitrogen ratio and specific organic loading rate as tools for improving biohydrogen production in fixed-bed reactors.	Anzola-Rojas MDP, Goncalves da Fonseca S, Canedo da Silva C, Maia de Oliveira V, Zaiat M.	Biotechnol Rep (Amst)	10.1016/j.btre.2014.10.010	2015
Metabolism	Nitrogenase: properties of the catalytically inactive complex between the Azotobacter vinelandii MoFe protein and the Clostridium pasteurianum Fe protein.	Emerich DW, Ljones T, Burris RH.	Biochim Biophys Acta	10.1016/0005-2744(78)90350-9	1978
Enzymology	The amino acid sequence of Clostridium pasteurianum iron protein, a component of nitrogenase. I. Tryptic peptides.	Tanaka M, Haniu M, Yasunobu KT.	J Biol Chem	10.1016/s0021-9258(19)66937-1	1977
	Using the Endogenous CRISPR-Cas System of Heliobacterium modesticaldum To Delete the Photochemical Reaction Center Core Subunit Gene.	Baker PL, Orf GS, Kevershan K, Pyne ME, Bicer T, Redding KE.	Appl Environ Microbiol	10.1128/aem.01644-19	2019
Metabolism	On the novel H2-activating iron-sulfur center of the "Fe-only" hydrogenases.	Adams MW, Johnson MK, Zambrano IC, Mortenson LE.	Biochimie	10.1016/s0300-9084(86)81065-3	1986
	Analysis of genes encoding an alternative nitrogenase in the archaeon Methanosarcina barkeri 227.	Chien YT, Auerbuch V, Brabban AD, Zinder SH.	J Bacteriol	10.1128/jb.182.11.3247-3253.2000	2000
	Examination of protein sequence homologies: I. Eleven Escherichia coli L7/L12-type ribosomal "A" protein sequences from eubacteria and chloroplast.	Otaka E, Ooi T, Kumazaki T, Itoh T.	J Mol Evol	10.1007/bf02115652	1984
Enzymology	ADP-ribosylation of dinitrogenase reductase from Clostridium pasteurianum prevents its inhibition of nitrogenase from Azotobacter vinelandii.	Murrell SA, Lowery RG, Ludden PW.	Biochem J	10.1042/bj2510609	1988
Enzymology	An electron-bifurcating caffeyl-CoA reductase.	Bertsch J, Parthasarathy A, Parthasarathy A, Buckel W, Muller V.	J Biol Chem	10.1074/jbc.m112.444919	2013
Enzymology	Evidence for separate enzymes of pyruvate decarboxylation and pyruvate synthesis in soluble extracts of Clostridium pasteurianum.	Bush RS, Sauer FD.	J Biol Chem	10.1016/s0021-9258(17)40508-4	1977
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Metabolism	Morphological modifications of cells of Clostridium pasteurianum caused by growth on sulfite.	McCready RG, Costerton JW, Laishley EJ.	Can J Microbiol	10.1139/m76-036	1976
Enzymology	Biocatalysis for the application of CO2 as a chemical feedstock.	Alissandratos A, Easton CJ.	Beilstein J Org Chem	10.3762/bjoc.11.259	2015
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Metabolism	Characterization of a thioredoxin-thioredoxin reductase system from the hyperthermophilic bacterium Thermotoga maritima.	Yang X, Ma K.	J Bacteriol	10.1128/jb.01035-09	2010
	Electron transfer between flavodoxin semiquinone and c-type cytochromes: correlations between electrostatically corrected rate constants, redox potentials, and surface topologies.	Tollin G, Cheddar G, Watkins JA, Meyer TE, Cusanovich MA.	Biochemistry	10.1021/bi00321a009	1984
Metabolism	Relative levels of guanosine 5'-diphosphate 3'-diphosphate (ppGpp) in some N2 fixing bacteria during derepression and repression of nitrogenase.	Kleiner D, Phillips S.	Arch Microbiol	10.1007/bf00422542	1981
Metabolism	Transient kinetics of redox reactions of flavodoxin: effects of chemical modification of the flavin mononucleotide prosthetic group on the dynamics of intermediate complex formation and electron transfer.	Simondsen RP, Tollin G.	Biochemistry	10.1021/bi00281a034	1983
Phylogeny	Lipid composition in the classification of the butyric acid-producing clostridia.	Johnston NC, Goldfine H.	J Gen Microbiol	10.1099/00221287-129-4-1075	1983
	Molecular symmetry of the MoFe protein of nitrogenase. Structural homology/nitrogen fixation/x-ray crystallography.	Yamane T, Weininger MS, Mortenson LE, Rossmann MG.	J Biol Chem	10.1016/s0021-9258(19)68178-0	1982
Metabolism	Distinct reduction of nitrofurans and metronidazole to free radical metabolites by Tritrichomonas foetus hydrogenosomal and cytosolic enzymes.	Moreno SN, Mason RP, Docampo R.	J Biol Chem	10.1016/s0021-9258(17)39721-1	1984
Metabolism	The ferredoxin:NAD+ oxidoreductase (Rnf) from the acetogen Acetobacterium woodii requires Na+ and is reversibly coupled to the membrane potential.	Hess V, Schuchmann K, Muller V.	J Biol Chem	10.1074/jbc.m113.510255	2013
Metabolism	IOP1, a novel hydrogenase-like protein that modulates hypoxia-inducible factor-1alpha activity.	Huang J, Song D, Flores A, Zhao Q, Mooney SM, Shaw LM, Lee FS.	Biochem J	10.1042/bj20060635	2007
Enzymology	The proton-translocating adenosine triphosphatase of the obligately anaerobic bacterium Clostridium pasteurianum. 1. ATP phosphohydrolase activity.	Clarke DJ, Fuller FM, Morris JG.	Eur J Biochem	10.1111/j.1432-1033.1979.tb13222.x	1979
Enzymology	Alpha-isopropylmalate synthase as a marker for the leucine biosynthetic pathway in several clostridia and in Bacteroides fragilis.	Wiegel J.	Arch Microbiol	10.1007/bf00414605	1981
Enzymology	Regulation and properties of an invertase from Clostridium pasteurianum.	Laishley EJ.	Can J Microbiol	10.1139/m75-251	1975
Enzymology	E.p.r.-spectroscopic studies on the molybdenum-iron site of nitrogenase from Clostridium pasteurianum.	George GN, Bare RE, Jin HY, Stiefel EI, Prince RC.	Biochem J	10.1042/bj2620349	1989
Metabolism	Molecular hydrogen is involved in phytohormone signaling and stress responses in plants.	Zeng J, Zhang M, Sun X.	PLoS One	10.1371/journal.pone.0071038	2013
Metabolism	Zinc-substituted Desulfovibrio gigas desulforedoxins: resolving subunit degeneracy with nonsymmetric pseudocontact shifts.	Goodfellow BJ, Nunes SG, Rusnak F, Moura I, Ascenso C, Moura JJ, Volkman BF, Markley JL.	Protein Sci	10.1110/ps.0208802	2002
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Metabolism	Heterologous Expression of the Clostridium carboxidivorans CO Dehydrogenase Alone or Together with the Acetyl Coenzyme A Synthase Enables both Reduction of CO₂ and Oxidation of CO by Clostridium acetobutylicum.	Carlson ED, Papoutsakis ET.	Appl Environ Microbiol	10.1128/aem.00829-17	2017
Enzymology	The separation of pyruvate-ferredoxin oxidoreductase from Clostridium pasteurianum into two enzymes catalyzing different reactions.	Sauer FD, Bush RS, Stevenson IL.	Biochim Biophys Acta	10.1016/0005-2744(76)90105-4	1976
Metabolism	The active species of 'CO2' utilized by reduced ferredoxin:CO2 oxidoreductase from Clostridium pasteurianum.	Thauer RK, Kaufer B, Fuchs G.	Eur J Biochem	10.1111/j.1432-1033.1975.tb02143.x	1975
Metabolism	Kinetic studies of reduction of a 1:1 cytochrome c-flavodoxin complex by free flavin semiquinones and rubredoxin.	Hazzard JT, Cusanovich MA, Tainer JA, Getzoff ED, Tollin G.	Biochemistry	10.1021/bi00359a035	1986
Metabolism	High affinity selenium uptake in a keratinocyte model.	Ganyc D, Self WT.	FEBS Lett	10.1016/j.febslet.2007.12.022	2008
Enzymology	The amino acid sequence of Clostridium pasteurianum iron protein, a component of nitrogenase. II. Cyanogen bromide peptides.	Tanaka M, Haniu M, Yasunobu KT.	J Biol Chem	10.1016/s0021-9258(19)66938-3	1977
Enzymology	X-ray-absorption-spectroscopic evidence for a novel iron cluster in hydrogenase II from Clostridium pasteurianum.	George GN, Prince RC, Stokley KE, Adams MW.	Biochem J	10.1042/bj2590597	1989
Metabolism	Stable isotope fractionation by Clostridium pasteurianum. 1. 34S/32S: inverse isotope effects during SO4-2- and SO3-2- reduction.	McCready RG, Laishley EJ, Krouse HR.	Can J Microbiol	10.1139/m75-034	1975
Enzymology	Correspondence of the larger subunit of the MoFe-protein in clostridial nitrogenase to the nif D gene products of other N2-fixing organisms.	Hase T, Nakano T, Matsubara H, Zumft WG.	J Biochem	10.1093/oxfordjournals.jbchem.a133466	1981
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Metabolism	Non-cyanobacterial diazotrophs mediate dinitrogen fixation in biological soil crusts during early crust formation.	Pepe-Ranney C, Koechli C, Potrafka R, Andam C, Eggleston E, Garcia-Pichel F, Buckley DH.	ISME J	10.1038/ismej.2015.106	2016
Enzymology	On nitroaryl reductase activities in several Clostridia.	Angermaier L, Simon H.	Hoppe Seylers Z Physiol Chem	10.1515/bchm2.1983.364.2.1653	1983
Metabolism	Hydrogenosomal ferredoxin of the anaerobic protozoon, Tritrichomonas foetus.	Marczak R, Gorrell TE, Muller M.	J Biol Chem	10.1016/s0021-9258(17)44193-7	1983
Metabolism	The internal-alkaline pH gradient, sensitive to uncoupler and ATPase inhibitor, in growing Clostridium pasteurianum.	Riebeling V, Thauer RK, Jungermann K.	Eur J Biochem	10.1111/j.1432-1033.1975.tb02181.x	1975
Enzymology	A bacterial electron-bifurcating hydrogenase.	Schuchmann K, Muller V.	J Biol Chem	10.1074/jbc.m112.395038	2012
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Enzymology	Isolation of thiomolybdate compounds from the molybdenum-iron protein of clostridial nitrogenase.	Zumft WG.	Eur J Biochem	10.1111/j.1432-1033.1978.tb12686.x	1978
	Repeated structure and possible gene duplications in high potential iron protein and rubredoxin.	McLachlan AD.	J Mol Evol	10.1007/bf01733137	1980
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	The use of 13C nuclear magnetic resonance of aromatic amino acid residues to determine the midpoint oxidation-reduction potential of each iron-sulfur cluster of Clostridium acidi-urici and Clostridium pasteurianum ferredoxins.	Packer EL, Sternlicht H.	J Biol Chem	10.1016/s0021-9258(19)41683-9	1975
Enzymology	Efficient Genome Editing in Clostridium cellulolyticum via CRISPR-Cas9 Nickase.	Xu T, Li Y, Shi Z, Hemme CL, Li Y, Zhu Y, Van Nostrand JD, He Z, Zhou J.	Appl Environ Microbiol	10.1128/aem.00873-15	2015
Enzymology	Nucleotide sequence of the gene coding for the nitrogenase iron protein from Klebsiella pneumoniae.	Sundaresan V, Ausubel FM.	J Biol Chem	10.1016/s0021-9258(19)69686-9	1981
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Metabolism	Heterotrimeric NADH-oxidizing methylenetetrahydrofolate reductase from the acetogenic bacterium Acetobacterium woodii.	Bertsch J, Oppinger C, Hess V, Langer JD, Muller V.	J Bacteriol	10.1128/jb.00048-15	2015
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Metabolism	Transient kinetics of electron-transfer reactions of flavodoxins.	Jung J, Tollin G.	Biochemistry	10.1021/bi00521a005	1981
Metabolism	Reduced ferredoxin: CO2 oxidoreductase from Clostridium pasteurianum. Effect of ligands to transition metals on the activity and the stability of the enzyme.	Thauer RK, Fuchs G, Kaufer B.	Hoppe Seylers Z Physiol Chem	10.1515/bchm2.1975.356.s1.653	1975
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Enzymology	Interaction of nitrogenase with nucleotide analogs of ATP and ADP and the effect of metal ions on ADP inhibition.	Weston MF, Kotake S, Davis LC.	Arch Biochem Biophys	10.1016/0003-9861(83)90093-0	1983
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Enzymology	Flavodoxin cofactor binding induces structural changes that are required for protein-protein interactions with NADP(+) oxidoreductase and pyruvate formate-lyase activating enzyme.	Crain AV, Broderick JB.	Biochim Biophys Acta	10.1016/j.bbapap.2013.08.014	2013
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Enzymology	Chelating agents protect hydrogenase against oxygen inactivation.	Klibanov AM, Kaplan NO, Kamen MD.	Biochim Biophys Acta	10.1016/0005-2728(79)90021-5	1979
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Metabolism	[Fixation of molecular nitrogen and activity of the microflora in the bottoms of certain lakes in the Estonian SSR and the Rybinsk reservoir].	Saralov AI, Dziuban AN, Krylova IN.	Mikrobiologiia		1980
Metabolism	Kinetics and properties of beta-ketothiolase from Clostridium pasteurianum.	Berndt H, Schlegel HG.	Arch Microbiol	10.1007/bf00436325	1975
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Enzymology	The iron-sulfur centers and the function of hydrogenase from Clostridium pasteurianum.	Chen JS, Mortenson LE, Palmer G.	Adv Exp Med Biol	10.1007/978-1-4684-3270-1_6	1976
Enzymology	Clostridial apoferredoxin messenger ribonucleic acid. Assay and partial purification.	Liao HH, Rabinowitz JC.	Biochim Biophys Acta	10.1016/0005-2787(80)90176-8	1980
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Pathogenicity	Metabolic products of microorganisms. 170. On the antibiotic activity of cladosporin.	Anke H, Zahner H.	Arch Microbiol	10.1007/bf00417848	1978
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Metabolism	NMR and X-ray analysis of structural additivity in metal binding site-swapped hybrids of rubredoxin.	LeMaster DM, Anderson JS, Wang L, Guo Y, Li H, Hernandez G.	BMC Struct Biol	10.1186/1472-6807-7-81	2007
Pathogenicity	Role of the phosphoroclastic reaction of Clostridium pasteurianum in the reduction of metronidazole.	Lockerby DL, Rabin HR, Laishley EJ.	Antimicrob Agents Chemother	10.1128/aac.27.5.863	1985
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Metabolism	Asp1 from Schizosaccharomyces pombe binds a [2Fe-2S](2+) cluster which inhibits inositol pyrophosphate 1-phosphatase activity.	Wang H, Nair VS, Holland AA, Capolicchio S, Jessen HJ, Johnson MK, Shears SB.	Biochemistry	10.1021/acs.biochem.5b00532	2015
Metabolism	Biomimetic synthesis of selenium nanospheres by bacterial strain JS-11 and its role as a biosensor for nanotoxicity assessment: a novel se-bioassay.	Dwivedi S, Alkhedhairy AA, Ahamed M, Musarrat J.	PLoS One	10.1371/journal.pone.0057404	2013
Metabolism	Regulation of granulose synthesis in Clostridium pasteurianum.	Robson RL, Robson RM, Morris JG.	Biochem J	10.1042/bj1300004p	1972
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Metabolism	Characterization of a salt-induced DhAHP, a gene coding for alkyl hydroperoxide reductase, from the extremely halophilic yeast Debaryomyces hansenii.	Chao HF, Yen YF, Ku MS.	BMC Microbiol	10.1186/1471-2180-9-182	2009
Metabolism	The electron spin relaxation of the electron acceptors of photosystem I reaction centre studied by microwave power saturation.	Rupp H, de la Torre A, Hall DO.	Biochim Biophys Acta	10.1016/0005-2728(79)90064-1	1979
Phylogeny	Phylogenetic studies of two rubredoxins from sulfate reducing bacteria.	Vogel H, Bruschi M, Le Gall J.	J Mol Evol	10.1007/bf01732743	1977
Enzymology	Regulatory properties of the nitrogenase from Rhodopseudomonas palustris.	Zumft WG, Castillo F.	Arch Microbiol	10.1007/bf00689351	1978
Metabolism	The apparent ATP requirement for nitrogen fixation in growing Klebsiella pneumoniae.	Hill S.	J Gen Microbiol	10.1099/00221287-95-2-297	1976
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Metabolism	Ferredoxin-linked reduction of metronidazole in Clostridium pasteurianum.	Lockerby DL, Rabin HR, Bryan LE, Laishley EJ.	Antimicrob Agents Chemother	10.1128/aac.26.5.665	1984
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Metabolism	The active species of "CO2" utilized in ferredoxin-linked carboxylation reactions.	Thauer RK, Kaufer B, Scherer P.	Arch Microbiol	10.1007/bf00447330	1975
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Metabolism	Butyricin 7423: a bacteriocin produced by Clostridium butyricum NCIB7423.	Clarke DJ, Morris JG.	J Gen Microbiol	10.1099/00221287-95-1-67	1976
Metabolism	Insights into Flavin-based Electron Bifurcation via the NADH-dependent Reduced Ferredoxin:NADP Oxidoreductase Structure.	Demmer JK, Huang H, Wang S, Demmer U, Thauer RK, Ermler U.	J Biol Chem	10.1074/jbc.m115.656520	2015
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	Combined inactivation of the Clostridium cellulolyticum lactate and malate dehydrogenase genes substantially increases ethanol yield from cellulose and switchgrass fermentations.	Li Y, Tschaplinski TJ, Engle NL, Hamilton CY, Rodriguez M, Liao JC, Schadt CW, Guss AM, Yang Y, Graham DE.	Biotechnol Biofuels	10.1186/1754-6834-5-2	2012
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Metabolism	Involvement of the Eukaryote-Like Kinase-Phosphatase System and a Protein That Interacts with Penicillin-Binding Protein 5 in Emergence of Cephalosporin Resistance in Cephalosporin-Sensitive Class A Penicillin-Binding Protein Mutants in Enterococcus faecium.	Desbonnet C, Tait-Kamradt A, Garcia-Solache M, Dunman P, Coleman J, Arthur M, Rice LB.	mBio	10.1128/mbio.02188-15	2016
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Proteome	Fold versus sequence effects on the driving force for protein-mediated electron transfer.	Perrin BS, Ichiye T.	Proteins	10.1002/prot.22794	2010
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Metabolism	Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus D14C ferredoxin via nuclear resonance vibrational and resonance Raman spectroscopies, force field simulations, and density functional theory calculations.	Mitra D, Pelmenschikov V, Guo Y, Case DA, Wang H, Dong W, Tan ML, Ichiye T, Jenney FE, Adams MW, Adams MW, Yoda Y, Zhao J, Cramer SP.	Biochemistry	10.1021/bi200046p	2011
Pathogenicity	Trifluoromethionine, a prodrug designed against methionine gamma-lyase-containing pathogens, has efficacy in vitro and in vivo against Trichomonas vaginalis.	Coombs GH, Mottram JC.	Antimicrob Agents Chemother	10.1128/aac.45.6.1743-1745.2001	2001
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Metabolism	The electron transport to nitrogenase in Mycobacterium flavum.	Bothe H, Yates MG.	Arch Microbiol	10.1007/bf00427863	1976
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Metabolism	Chemical reactivity of labile sulfur of iron-sulfur proteins. The reaction of triphenyl phosphine.	Manabe T, Goda K, Kimura T.	Biochim Biophys Acta	10.1016/0304-4165(76)90039-8	1976
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Metabolism	Studies on some characteristics of hydrogen production by cell-free extracts of rumen anaerobic bacteria.	Joyner AE, Winter WT, Godbout DM.	Can J Microbiol	10.1139/m77-051	1977
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Metabolism	Iron-sulfur clusters of hydrogenase I and hydrogenase II of Clostridium pasteurianum.	Adams MW, Eccleston E, Howard JB.	Proc Natl Acad Sci U S A	10.1073/pnas.86.13.4932	1989
Metabolism	Purification and properties of threonine aldolase from Clostridium pasteurianum.	Dainty RH.	Biochem J	10.1042/bj1170585	1967
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Metabolism	Comparative bioactivation of the novel anti-tuberculosis agent PA-824 in Mycobacteria and a subcellular fraction of human liver.	Dogra M, Palmer BD, Bashiri G, Tingle MD, Shinde SS, Anderson RF, O'Toole R, Baker EN, Denny WA, Helsby NA.	Br J Pharmacol	10.1111/j.1476-5381.2010.01040.x	2011
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Enzymology	Unraveling the molecular mechanisms of nitrogenase conformational protection against oxygen in diazotrophic bacteria.	Lery LM, Bitar M, Costa MG, Rossle SC, Bisch PM.	BMC Genomics	10.1186/1471-2164-11-s5-s7	2010
Metabolism	Specificity of bacterial ribosomes and messenger ribonucleic acids in protein synthesis reactions in vitro.	Stallcup MR, Sharrock WJ, Rabinowitz JC.	J Biol Chem	10.1016/s0021-9258(17)33616-5	1976
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Enzymology	Properties of the glucose phosphotransferase system of Clostridium acetobutylicum NCIB 8052.	Mitchell WJ, Shaw JE, Andrews L.	Appl Environ Microbiol	10.1128/aem.57.9.2534-2539.1991	1991
Genetics	Pan-genome analyses of model fungal species.	McCarthy CGP, Fitzpatrick DA.	Microb Genom	10.1099/mgen.0.000243	2019
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Enzymology	The unusual metal clusters of nitrogenase: structural features revealed by x-ray anomalous diffraction studies of the MoFe protein from Clostridium pasteurianum.	Bolin JT, Ronco AE, Morgan TV, Mortenson LE, Xuong NH.	Proc Natl Acad Sci U S A	10.1073/pnas.90.3.1078	1993
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Metabolism	Apparent oxidation-reduction potential of Clostridium acidi-urici ferredoxin. Effect of pH, ionic strength, and amino acid replacements.	Lode ET, Murray CL, Rabinowitz JC.	J Biol Chem	10.1016/s0021-9258(17)33703-1	1976
Metabolism	Purification and characterization of a molybdenum-pterin-binding protein (Mop) in Clostridium pasteurianum W5.	Hinton SM, Merritt B.	J Bacteriol	10.1128/jb.168.2.688-693.1986	1986
Metabolism	Hydrogen production by recombinant Escherichia coli strains.	Maeda T, Sanchez-Torres V, Wood TK.	Microb Biotechnol	10.1111/j.1751-7915.2011.00282.x	2012
Metabolism	Regulation of F0F1-ATPase from Synechocystis sp. PCC 6803 by gamma and epsilon subunits is significant for light/dark adaptation.	Imashimizu M, Bernat G, Sunamura E, Broekmans M, Konno H, Isato K, Rogner M, Hisabori T.	J Biol Chem	10.1074/jbc.m111.234138	2011
Metabolism	Direct assignment of the cysteinyl, the slowly exchangeable, and the aromatic ring 1H nuclear magnetic resonances in clostridial-type ferredoxins.	Packer EL, Sweeney WV, Rabinowitz JC.	J Biol Chem	10.1016/s0021-9258(17)40547-3	1977
Metabolism	Glutamate biosynthesis in Clostridium pasteurianum and its significance in nitrogen metabolism.	Dainty RH.	Biochem J	10.1042/bj1261055	1972
Metabolism	Redox Control of the Human Iron-Sulfur Repair Protein MitoNEET Activity via Its Iron-Sulfur Cluster.	Golinelli-Cohen MP, Lescop E, Mons C, Goncalves S, Clemancey M, Santolini J, Guittet E, Blondin G, Latour JM, Bouton C.	J Biol Chem	10.1074/jbc.m115.711218	2016
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Enzymology	Formate dehydrogenase of Clostridium pasteurianum.	Liu CL, Mortenson LE.	J Bacteriol	10.1128/jb.159.1.375-380.1984	1984
Enzymology	Immunological relationship among hydrogenases.	Kovacs KL, Seefeldt LC, Tigyi G, Doyle CM, Mortenson LE, Arp DJ.	J Bacteriol	10.1128/jb.171.1.430-435.1989	1989
Enzymology	Nitrogenase from Azotobacter chroococcum. Purification and properties of the component proteins.	Yates MG, Planque K.	Eur J Biochem	10.1111/j.1432-1033.1975.tb21025.x	1975
Phylogeny	Bacteroidales ectosymbionts of gut flagellates shape the nitrogen-fixing community in dry-wood termites.	Desai MS, Brune A.	ISME J	10.1038/ismej.2011.194	2012
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Enzymology	Partial purification of a dicyclohexylcarbodi-imide-sensitive membrane adenosine triphosphatase complex from the obligately anaerobic bacterium Clostridium Pasteurianum.	Clarke DJ, Morris JG.	Biochem J	10.1042/bj1540725	1976
	Characterization of the [2Fe-2S] cluster of Escherichia coli transcription factor IscR.	Fleischhacker AS, Stubna A, Hsueh KL, Guo Y, Teter SJ, Rose JC, Brunold TC, Markley JL, Munck E, Kiley PJ.	Biochemistry	10.1021/bi3003204	2012
Metabolism	A Novel F420-dependent Thioredoxin Reductase Gated by Low Potential FAD: A TOOL FOR REDOX REGULATION IN AN ANAEROBE.	Susanti D, Loganathan U, Mukhopadhyay B.	J Biol Chem	10.1074/jbc.m116.750208	2016
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Metabolism	Fructose degradation in the haloarchaeon Haloferax volcanii involves a bacterial type phosphoenolpyruvate-dependent phosphotransferase system, fructose-1-phosphate kinase, and class II fructose-1,6-bisphosphate aldolase.	Pickl A, Johnsen U, Schonheit P.	J Bacteriol	10.1128/jb.00200-12	2012
Metabolism	How does protein architecture facilitate the transduction of ATP chemical-bond energy into mechanical work? The cases of nitrogenase and ATP binding-cassette proteins.	Liao JL, Beratan DN.	Biophys J	10.1529/biophysj.103.038653	2004
Metabolism	Regulation and order of involvement of molybdoproteins during synthesis of molybdoenzymes in Clostridium pasteurianum.	Hinton SM, Mortenson LE.	J Bacteriol	10.1128/jb.162.2.485-493.1985	1985
Metabolism	Cloning, expression and sequencing the molybdenum-pterin binding protein (mop) gene of Clostridium pasteurianum in Escherichia coli.	Hinton SM, Freyer G.	Nucleic Acids Res	10.1093/nar/14.23.9371	1986
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Metabolism	Photosynthetic electron partitioning between [FeFe]-hydrogenase and ferredoxin:NADP+-oxidoreductase (FNR) enzymes in vitro.	Yacoby I, Pochekailov S, Toporik H, Ghirardi ML, King PW, Zhang S.	Proc Natl Acad Sci U S A	10.1073/pnas.1103659108	2011
Enzymology	Purification of hydrogenases by affinity chromatography on Procion Red-agarose.	Schneider K, Pinkwart M, Jochim K.	Biochem J	10.1042/bj2130391	1983
Stress	A novel and remarkably thermostable ferredoxin from the hyperthermophilic archaebacterium Pyrococcus furiosus.	Aono S, Bryant FO, Adams MW.	J Bacteriol	10.1128/jb.171.6.3433-3439.1989	1989
Phylogeny	Cloning, functional organization, transcript studies, and phylogenetic analysis of the complete nitrogenase structural genes (nifHDK2) and associated genes in the archaeon Methanosarcina barkeri 227.	Chien YT, Zinder SH.	J Bacteriol	10.1128/jb.178.1.143-148.1996	1996
Metabolism	Direct detection of potential selenium delivery proteins by using an Escherichia coli strain unable to incorporate selenium from selenite into proteins.	Lacourciere GM, Levine RL, Stadtman TC.	Proc Natl Acad Sci U S A	10.1073/pnas.142291199	2002
Enzymology	A substrate channel in the nitrogenase MoFe protein.	Barney BM, Yurth MG, Dos Santos PC, Dean DR, Seefeldt LC.	J Biol Inorg Chem	10.1007/s00775-009-0544-2	2009
Enzymology	Eukaryotic DNA polymerases require an iron-sulfur cluster for the formation of active complexes.	Netz DJ, Stith CM, Stumpfig M, Kopf G, Vogel D, Genau HM, Stodola JL, Lill R, Burgers PM, Pierik AJ.	Nat Chem Biol	10.1038/nchembio.721	2011
Genetics	The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.	Seedorf H, Fricke WF, Veith B, Bruggemann H, Liesegang H, Strittmatter A, Miethke M, Buckel W, Hinderberger J, Li F, Hagemeier C, Thauer RK, Gottschalk G.	Proc Natl Acad Sci U S A	10.1073/pnas.0711093105	2008
	Inactivation of [Fe-Fe]-Hydrogenase by O(2). Thermodynamics and Frontier Molecular Orbitals Analyses.	Dogaru D, Motiu S, Gogonea V.	Int J Quantum Chem	10.1002/qua.21875	2009
	Characterization of an operon encoding an NADP-reducing hydrogenase in Desulfovibrio fructosovorans.	Malki S, Saimmaime I, De Luca G, Rousset M, Dermoun Z, Belaich JP.	J Bacteriol	10.1128/jb.177.10.2628-2636.1995	1995
Metabolism	Clostridium difficile has two parallel and essential Sec secretion systems.	Fagan RP, Fairweather NF.	J Biol Chem	10.1074/jbc.m111.263889	2011
Metabolism	Culture of Clostridium pasteurianum in difined medium and grwoth as a function of slufate concentration.	Mallette MF, Reece P, Dawes EA.	Appl Microbiol	10.1128/am.28.6.999-1003.1974	1974
	Proteomic profiling of L-cysteine induced selenite resistance in Enterobacter sp. YSU.	Jasenec A, Barasa N, Kulkarni S, Shaik N, Moparthi S, Konda V, Caguiat J.	Proteome Sci	10.1186/1477-5956-7-30	2009
Metabolism	Transport of molybdate by Clostridium pasteurianum.	Elliott BB, Mortenson LE.	J Bacteriol	10.1128/jb.124.3.1295-1301.1975	1975
Phylogeny	Genetic diversity of nifH gene sequences in paenibacillus azotofixans strains and soil samples analyzed by denaturing gradient gel electrophoresis of PCR-amplified gene fragments.	Rosado AS, Duarte GF, Seldin L, Van Elsas JD.	Appl Environ Microbiol	10.1128/aem.64.8.2770-2779.1998	1998
Metabolism	Molybdenum trafficking for nitrogen fixation.	Hernandez JA, George SJ, Rubio LM.	Biochemistry	10.1021/bi901217p	2009
Metabolism	Substrate-induced radical formation in 4-hydroxybutyryl coenzyme A dehydratase from Clostridium aminobutyricum.	Zhang J, Friedrich P, Pierik AJ, Martins BM, Buckel W.	Appl Environ Microbiol	10.1128/aem.03099-14	2015
	The VirSR two-component signal transduction system regulates NetB toxin production in Clostridium perfringens.	Cheung JK, Keyburn AL, Carter GP, Lanckriet AL, Van Immerseel F, Moore RJ, Rood JI.	Infect Immun	10.1128/iai.00123-10	2010
Metabolism	Iron-binding characterization and polysaccharide production by Klebsiella oxytoca strain isolated from mine acid drainage.	Baldi F, Marchetto D, Battistel D, Daniele S, Faleri C, De Castro C, Lanzetta R.	J Appl Microbiol	10.1111/j.1365-2672.2009.04302.x	2009
Metabolism	Underground isoleucine biosynthesis pathways in E. coli.	Cotton CA, Bernhardsgrutter I, He H, Burgener S, Schulz L, Paczia N, Dronsella B, Erban A, Toman S, Dempfle M, De Maria A, Kopka J, Lindner SN, Erb TJ, Bar-Even A.	Elife	10.7554/elife.54207	2020
	Biochemistry, genetics and biotechnology of glycerol utilization in Pseudomonas species.	Poblete-Castro I, Wittmann C, Nikel PI.	Microb Biotechnol	10.1111/1751-7915.13400	2020
	Modeling the structure of Pyrococcus furiosus rubredoxin by homology to other X-ray structures.	Wampler JE, Bradley EA, Stewart DE, Adams MW.	Protein Sci	10.1002/pro.5560020414	1993
	Mössbauer effect in the 'super-reduced' form of the high-potential iron-sulphur protein from Chromatium.	Dickson DP, Cammack R.	Biochem J	10.1042/bj1430763	1974
Enzymology	Feedback inhibition of nitrogenase.	Gordon JK, Shah VK, Brill WJ.	J Bacteriol	10.1128/jb.148.3.884-888.1981	1981
Enzymology	The mother-cell-membrane adenosine triphosphatase of sporulating Clostridium pasteurianum.	Clarke DJ, Morris JG.	Biochem J	10.1042/bj1860191	1980
	Comparison of the iron proteins from the nitrogen fixation complexes of Azotobacter vinelandii, Clostridium pasteurianum, and Klebsiella pneumoniae.	Hausinger RP, Howard JB.	Proc Natl Acad Sci U S A	10.1073/pnas.77.7.3826	1980
	The presence of five nifH-like sequences in Clostridium pasteurianum: sequence divergence and transcription properties.	Wang SZ, Chen JS, Johnson JL.	Nucleic Acids Res	10.1093/nar/16.2.439	1988
Metabolism	Bio-palladium: from metal recovery to catalytic applications.	De Corte S, Hennebel T, De Gusseme B, Verstraete W, Boon N.	Microb Biotechnol	10.1111/j.1751-7915.2011.00265.x	2012
Metabolism	Characterization of Rhodobacter capsulatus genes encoding a molybdenum transport system and putative molybdenum-pterin-binding proteins.	Wang G, Angermuller S, Klipp W.	J Bacteriol	10.1128/jb.175.10.3031-3042.1993	1993
	Quaternary ammonium oxidative demethylation: X-ray crystallographic, resonance Raman, and UV-visible spectroscopic analysis of a Rieske-type demethylase.	Daughtry KD, Xiao Y, Stoner-Ma D, Cho E, Orville AM, Liu P, Allen KN.	J Am Chem Soc	10.1021/ja2111898	2012
Metabolism	Hydrogen production by termite gut protists: characterization of iron hydrogenases of Parabasalian symbionts of the termite Coptotermes formosanus.	Inoue J, Saita K, Kudo T, Ui S, Ohkuma M.	Eukaryot Cell	10.1128/ec.00251-07	2007
Enzymology	Crystal structure of the nitrogenase-like dark operative protochlorophyllide oxidoreductase catalytic complex (ChlN/ChlB)2.	Brocker MJ, Schomburg S, Heinz DW, Jahn D, Schubert WD, Moser J.	J Biol Chem	10.1074/jbc.m110.126698	2010
	Structure of the molybdoferredoxin complex from Clostridium pasteurianum and isolation of its subunits.	Huang TC, Zumft WG, Mortenson LE.	J Bacteriol	10.1128/jb.113.2.884-890.1973	1973
Metabolism	Genetic and biochemical evidence for the involvement of a molybdenum-dependent enzyme in one of the selenite reduction pathways of Rhodobacter sphaeroides f. sp. denitrificans IL106.	Pierru B, Grosse S, Pignol D, Sabaty M.	Appl Environ Microbiol	10.1128/aem.72.5.3147-3153.2006	2006
Metabolism	Interactions of heterologous nitrogenase components that generate catalytically inactive complexes.	Emerich DW, Burris RH.	Proc Natl Acad Sci U S A	10.1073/pnas.73.12.4369	1976
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Enzymology	Genome-wide transcriptional analysis suggests hydrogenase- and nitrogenase-mediated hydrogen production in Clostridium butyricum CWBI 1009.	Calusinska M, Hamilton C, Monsieurs P, Mathy G, Leys N, Franck F, Joris B, Thonart P, Hiligsmann S, Wilmotte A.	Biotechnol Biofuels	10.1186/s13068-015-0203-5	2015
Metabolism	Specific interactions between four molybdenum-binding proteins contribute to Mo-dependent gene regulation in Rhodobacter capsulatus.	Wiethaus J, Muller A, Neumann M, Neumann S, Leimkuhler S, Narberhaus F, Masepohl B.	J Bacteriol	10.1128/jb.00526-09	2009
Metabolism	Mutational analysis of genes of the mod locus involved in molybdenum transport, homeostasis, and processing in Azotobacter vinelandii.	Mouncey NJ, Mitchenall LA, Pau RN.	J Bacteriol	10.1128/jb.177.18.5294-5302.1995	1995
Enzymology	Role of molybdenum in dinitrogen fixation by Clostridium pasteurianum.	Cardenas J, Mortenson LE.	J Bacteriol	10.1128/jb.123.3.978-984.1975	1975
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Metabolism	Superoxide-mediated amplification of the oxygen-induced switch from [4Fe-4S] to [2Fe-2S] clusters in the transcriptional regulator FNR.	Crack JC, Green J, Cheesman MR, Le Brun NE, Thomson AJ.	Proc Natl Acad Sci U S A	10.1073/pnas.0609514104	2007
Metabolism	Regulation of molybdate transport by Clostridium pasteurianum.	Elliott BB, Mortenson LE.	J Bacteriol	10.1128/jb.127.2.770-779.1976	1976
Metabolism	Mutant of Clostridium pasteurianum that does not fix nitrogen.	Simon MA, Brill WJ.	J Bacteriol	10.1128/jb.105.1.65-69.1971	1971
Metabolism	Pyruvate formate lyase is required for pneumococcal fermentative metabolism and virulence.	Yesilkaya H, Spissu F, Carvalho SM, Terra VS, Homer KA, Benisty R, Porat N, Neves AR, Andrew PW.	Infect Immun	10.1128/iai.00178-09	2009
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Metabolism	Ferredoxin/flavoprotein-linked pathway for the reduction of thioredoxin.	Hammel KE, Cornwell KL, Buchanan BB.	Proc Natl Acad Sci U S A	10.1073/pnas.80.12.3681	1983
Enzymology	Isolation, characterization, and biological activity of ferredoxin-NAD+ reductase from the methane oxidizer Methylosinus trichosporium OB3b.	Chen YP, Yoch DC.	J Bacteriol	10.1128/jb.171.9.5012-5016.1989	1989
Enzymology	Improvement of cellulolytic properties of Clostridium cellulolyticum by metabolic engineering.	Guedon E, Desvaux M, Petitdemange H.	Appl Environ Microbiol	10.1128/aem.68.1.53-58.2002	2002
	Methylmercury Resistance in Desulfovibrio desulfuricans Strains in Relation to Methylmercury Degradation.	Baldi F, Pepi M, Filippelli M.	Appl Environ Microbiol	10.1128/aem.59.8.2479-2485.1993	1993
Enzymology	Mechanism of carbamyl phosphate inhibition of nitrogenase of Clostridium pasteurianum.	Seto BL, Mortenson LE.	J Bacteriol	10.1128/jb.117.2.805-812.1974	1974
Enzymology	Effect of ammonia on the synthesis and function of the N 2 -fixing enzyme system in Clostridium pasteurianum.	Daesch G, Mortenson LE.	J Bacteriol	10.1128/jb.110.1.103-109.1972	1972
Metabolism	Reduction of technetium(VII) by Desulfovibrio fructosovorans is mediated by the nickel-iron hydrogenase.	De Luca G, de Philip P, Dermoun Z, Rousset M, Vermeglio A.	Appl Environ Microbiol	10.1128/aem.67.10.4583-4587.2001	2001
	Crystal structure of 4-hydroxybutyryl-CoA dehydratase: radical catalysis involving a [4Fe-4S] cluster and flavin.	Martins BM, Dobbek H, Cinkaya I, Buckel W, Messerschmidt A.	Proc Natl Acad Sci U S A	10.1073/pnas.0403952101	2004
	Proton magnetic resonance study of ferredoxin from Clostridium pasteurianum.	Poe M, Phillips WD, McDonald CC, Lovenberg W.	Proc Natl Acad Sci U S A	10.1073/pnas.65.4.797	1970
Enzymology	A rationale for stabilization of oxygen-labile enzymes: application to a clostridial hydrogenase.	Klibanov AM, Kaplan NO, Kamen MD.	Proc Natl Acad Sci U S A	10.1073/pnas.75.8.3640	1978
	Abundances and distributions of the dominant nifH phylotypes in the Northern Atlantic Ocean.	Langlois RJ, Hummer D, LaRoche J.	Appl Environ Microbiol	10.1128/aem.01720-07	2008
	Quantification of nitrogen reductase and nitrite reductase genes in soil of thinned and clear-cut Douglas-fir stands by using real-time PCR.	Levy-Booth DJ, Winder RS.	Appl Environ Microbiol	10.1128/aem.02188-09	2010
Phylogeny	Photosynthetic and phylogenetic primers for detection of anoxygenic phototrophs in natural environments.	Achenbach LA, Carey J, Madigan MT.	Appl Environ Microbiol	10.1128/aem.67.7.2922-2926.2001	2001
	System development for linked-fermentation production of solvents from algal biomass.	Nakas JP, Schaedle M, Parkinson CM, Coonley CE, Tanenbaum SW.	Appl Environ Microbiol	10.1128/aem.46.5.1017-1023.1983	1983
Genetics	Genome-wide analysis of alternative splicing in Volvox carteri.	Kianianmomeni A, Ong CS, Ratsch G, Hallmann A.	BMC Genomics	10.1186/1471-2164-15-1117	2014
Enzymology	Structural features of multiple nifH-like sequences and very biased codon usage in nitrogenase genes of Clostridium pasteurianum.	Chen KC, Chen JS, Johnson JL.	J Bacteriol	10.1128/jb.166.1.162-172.1986	1986
Metabolism	Efficiency factors and ATP/ADP ratios in nitrogen-fixing Bacillus polymyxa and Bacillus azotofixans.	Kanamori K, Weiss RL, Roberts JD.	J Bacteriol	10.1128/jb.172.4.1962-1968.1990	1990
Enzymology	Purification and properties of the constituents of the nitrogenase complex from Clostridium pasteurianum.	Vandecasteele JP, Burris RH.	J Bacteriol	10.1128/jb.101.3.794-801.1970	1970
	NH---S hydrogen bonds in Peptococcus aerogenes ferredoxin, Clostridium pasteurianum rubredoxin, and Chromatium high potential iron protein.	Adman E, Watenpaugh KD, Jensen LH.	Proc Natl Acad Sci U S A	10.1073/pnas.72.12.4854	1975
	Metal and sulfur composition of iron-molybdenum cofactor of nitrogenase.	Nelson MJ, Levy MA, Orme-Johnson WH.	Proc Natl Acad Sci U S A	10.1073/pnas.80.1.147	1983
Enzymology	Cross-functionality of nitrogenase components NifH1 and VnfH in Anabaena variabilis.	Pratte BS, Eplin K, Thiel T.	J Bacteriol	10.1128/jb.00618-06	2006
	Insulation of a synthetic hydrogen metabolism circuit in bacteria.	Agapakis CM, Ducat DC, Boyle PM, Wintermute EH, Way JC, Silver PA.	J Biol Eng	10.1186/1754-1611-4-3	2010
Enzymology	In vivo kinetics of nitrogenase formation in Clostridium pasteurianum.	Seto B, Mortenson LE.	J Bacteriol	10.1128/jb.120.2.822-830.1974	1974
Metabolism	Characterization of the Streptococcus mutans pyruvate formate-lyase (PFL)-activating enzyme gene by complementary reconstitution of the In vitro PFL-reactivating system.	Yamamoto Y, Sato Y, Takahashi-Abbe S, Takahashi N, Kizaki H.	Infect Immun	10.1128/iai.68.8.4773-4777.2000	2000
Metabolism	Were there any "misassignments" among iron-sulfur clusters N4, N5 and N6b in NADH-quinone oxidoreductase (complex I)?	Ohnishi T, Nakamaru-Ogiso E.	Biochim Biophys Acta	10.1016/j.bbabio.2008.04.032	2008
	A synthetic system links FeFe-hydrogenases to essential E. coli sulfur metabolism.	Barstow B, Agapakis CM, Boyle PM, Grandl G, Silver PA, Wintermute EH.	J Biol Eng	10.1186/1754-1611-5-7	2011
Enzymology	HYDROGENASE OF COLEMAN'S SULFATE-REDUCING BACTERIUM.	BULLER CS, AKAGI JM.	J Bacteriol	10.1128/jb.88.2.440-443.1964	1964
Enzymology	Construction and screening of metagenomic libraries derived from enrichment cultures: generation of a gene bank for genes conferring alcohol oxidoreductase activity on Escherichia coli.	Knietsch A, Waschkowitz T, Bowien S, Henne A, Daniel R.	Appl Environ Microbiol	10.1128/aem.69.3.1408-1416.2003	2003
Enzymology	Activation of inactive nitrogenase by acid-treated component I.	Nagatani HH, Shah VK, Brill WJ.	J Bacteriol	10.1128/jb.120.2.697-701.1974	1974
Metabolism	Thioredoxin system of the photosynthetic anaerobe Chromatium vinosum.	Johnson TC, Crawford NA, Buchanan BB.	J Bacteriol	10.1128/jb.158.3.1061-1069.1984	1984
Metabolism	The maturation factors HoxR and HoxT contribute to oxygen tolerance of membrane-bound [NiFe] hydrogenase in Ralstonia eutropha H16.	Fritsch J, Lenz O, Friedrich B.	J Bacteriol	10.1128/jb.01427-10	2011
	Identification of iron-sulfur centers in the iron-molybdenum proteins of nitrogenase.	Kurtz DM, McMillan RS, Burgess BK, Mortenson LE, Holm RH.	Proc Natl Acad Sci U S A	10.1073/pnas.76.10.4986	1979
Metabolism	Transcriptional analysis of the tutE tutFDGH gene cluster from Thauera aromatica strain T1.	Coschigano PW.	Appl Environ Microbiol	10.1128/aem.66.3.1147-1151.2000	2000
Metabolism	In vivo energetics and control of nitrogen fixation: changes in the adenylate energy charge and adenosine 5'-diphosphate/adenosine 5'-triphosphate ratio of cells during growth on dinitrogen versus growth on ammonia.	Upchurch RG, Mortenson LE.	J Bacteriol	10.1128/jb.143.1.274-284.1980	1980
Enzymology	Nitrogenases from Klebsiella pneumoniae and Clostridium pasteurianum. Kinetic investigations of cross-reactions as a probe of the enzyme mechanism.	Smith BE, Thorneley RN, Eady RR, Mortenson LE.	Biochem J	10.1042/bj1570439	1976
Enzymology	Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes.	Poudel S, Dunham EC, Lindsay MR, Amenabar MJ, Fones EM, Colman DR, Boyd ES.	Front Microbiol	10.3389/fmicb.2018.01762	2018
Genetics	Genome mining in Sorangium cellulosum So ce56: identification and characterization of the homologous electron transfer proteins of a myxobacterial cytochrome P450.	Ewen KM, Hannemann F, Khatri Y, Perlova O, Kappl R, Krug D, Huttermann J, Muller R, Bernhardt R.	J Biol Chem	10.1074/jbc.m109.021717	2009
Metabolism	Sucrose catabolism in Clostridium pasteurianum and its relation to N2 fixation.	Daesch G, Mortenson LE.	J Bacteriol	10.1128/jb.96.2.346-351.1968	1968
Metabolism	Involvement of NADH:acceptor oxidoreductase and butyryl coenzyme A dehydrogenase in reversed electron transport during syntrophic butyrate oxidation by Syntrophomonas wolfei.	Muller N, Schleheck D, Schink B.	J Bacteriol	10.1128/jb.01605-08	2009
	Production of a functional cell wall-anchored minicellulosome by recombinant Clostridium acetobutylicum ATCC 824.	Willson BJ, Kovacs K, Wilding-Steele T, Markus R, Winzer K, Minton NP.	Biotechnol Biofuels	10.1186/s13068-016-0526-x	2016
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Metabolism	Glyceraldehyde-3-phosphate ferredoxin oxidoreductase from Methanococcus maripaludis.	Park MO, Mizutani T, Jones PR.	J Bacteriol	10.1128/jb.00828-07	2007
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Metabolism	Kinetic studies on Klebsiella pneumoniae nitrogenase.	Parejko RA, Wilson PW.	Proc Natl Acad Sci U S A	10.1073/pnas.68.9.2016	1971
Metabolism	X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.	Day MW, Hsu BT, Joshua-Tor L, Park JB, Zhou ZH, Adams MW, Rees DC.	Protein Sci	10.1002/pro.5560011111	1992
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Metabolism	Functional, structural, and spectroscopic characterization of a glutathione-ligated [2Fe-2S] cluster in poplar glutaredoxin C1.	Rouhier N, Unno H, Bandyopadhyay S, Masip L, Kim SK, Hirasawa M, Gualberto JM, Lattard V, Kusunoki M, Knaff DB, Georgiou G, Hase T, Johnson MK, Jacquot JP.	Proc Natl Acad Sci U S A	10.1073/pnas.0702268104	2007
Enzymology	Nitrogen fixation and hydrogen metabolism in cyanobacteria.	Bothe H, Schmitz O, Yates MG, Newton WE.	Microbiol Mol Biol Rev	10.1128/mmbr.00033-10	2010
Metabolism	O2 and reactive oxygen species detoxification complex, composed of O2-responsive NADH:rubredoxin oxidoreductase-flavoprotein A2-desulfoferrodoxin operon enzymes, rubperoxin, and rubredoxin, in Clostridium acetobutylicum.	Kawasaki S, Sakai Y, Takahashi T, Suzuki I, Niimura Y.	Appl Environ Microbiol	10.1128/aem.01425-08	2009
Metabolism	The post-translational modification of the Clostridium difficile flagellin affects motility, cell surface properties and virulence.	Faulds-Pain A, Twine SM, Vinogradov E, Strong PC, Dell A, Buckley AM, Douce GR, Valiente E, Logan SM, Wren BW.	Mol Microbiol	10.1111/mmi.12755	2014
Metabolism	Kinetic and thermodynamic features reveal that Escherichia coli BCP is an unusually versatile peroxiredoxin.	Reeves SA, Parsonage D, Nelson KJ, Poole LB.	Biochemistry	10.1021/bi200935d	2011
Metabolism	Oxidation of carbon monoxide in cell extracts of Pseudomonas carboxydovorans.	Meyer O, Schlegel HG.	J Bacteriol	10.1128/jb.137.2.811-817.1979	1979
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	Structure of human J-type co-chaperone HscB reveals a tetracysteine metal-binding domain.	Bitto E, Bingman CA, Bittova L, Kondrashov DA, Bannen RM, Fox BG, Markley JL, Phillips GN.	J Biol Chem	10.1074/jbc.m804746200	2008
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Metabolism	Diiron dithiolato carbonyls related to the H(ox)CO state of [FeFe]-hydrogenase.	Justice AK, Nilges MJ, Rauchfuss TB, Wilson SR, De Gioia L, Zampella G.	J Am Chem Soc	10.1021/ja7113008	2008
Metabolism	Flavin mononucleotide-binding flavoprotein family in the domain Archaea.	Ding YH, Ferry JG.	J Bacteriol	10.1128/jb.186.1.90-97.2004	2004
Enzymology	Isolation of an iron-molybdenum cofactor from nitrogenase.	Shah VK, Brill WJ.	Proc Natl Acad Sci U S A	10.1073/pnas.74.8.3249	1977
Metabolism	Reduction of technetium by Desulfovibrio desulfuricans: biocatalyst characterization and use in a flowthrough bioreactor.	Lloyd JR, Ridley J, Khizniak T, Lyalikova NN, Macaskie LE.	Appl Environ Microbiol	10.1128/aem.65.6.2691-2696.1999	1999
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	Protein engineering reveals ancient adaptive replacements in isocitrate dehydrogenase.	Dean AM, Golding GB.	Proc Natl Acad Sci U S A	10.1073/pnas.94.7.3104	1997
	Rubredoxin: a new electron transfer protein from Clostridium pasteurianum.	Lovenberg W, Sobel BE.	Proc Natl Acad Sci U S A	10.1073/pnas.54.1.193	1965
Enzymology	Paramagnetic centers in the nickel-containing, deazaflavin-reducing hydrogenase from Methanobacterium thermoautotrophicum.	Kojima N, Fox JA, Hausinger RP, Daniels L, Orme-Johnson WH, Walsh C.	Proc Natl Acad Sci U S A	10.1073/pnas.80.2.378	1983
Metabolism	Physiological ecology of Clostridium glycolicum RD-1, an aerotolerant acetogen isolated from sea grass roots.	Kusel K, Karnholz A, Trinkwalter T, Devereux R, Acker G, Drake HL.	Appl Environ Microbiol	10.1128/aem.67.10.4734-4741.2001	2001
Pathogenicity	Effect of selenite on growth and protein synthesis in the phototrophic bacterium Rhodobacter sphaeroides.	Bebien M, Chauvin JP, Adriano JM, Grosse S, Vermeglio A.	Appl Environ Microbiol	10.1128/aem.67.10.4440-4447.2001	2001
	Radioassay for hydrogenase activity in viable cells and documentation of aerobic hydrogen-consuming bacteria living in extreme environments.	Schink B, Lupton FS, Zeikus JG.	Appl Environ Microbiol	10.1128/aem.45.5.1491-1500.1983	1983
	A reverse vaccinomics approach for the designing of novel immunogenic multi-epitope vaccine construct against gas gangrene and related colorectal cancer for Clostridium septicum DSM 7534.	Hassan Khanzada M, Khan A, Khan K, Jalal K, Aghayeva S, Uddin R.	Hum Immunol	10.1016/j.humimm.2024.111169	2024
Phylogeny	Biodiversity and Phylogenetic Relationships of Novel Bacteriocinogenic Strains Isolated from Animal's Droppings at the Zoological Garden of Lille, France.	Eveno M, Salouhi A, Belguesmia Y, Bazinet L, Gancel F, Fliss I, Drider D.	Probiotics Antimicrob Proteins	10.1007/s12602-020-09657-4	2021
	Carbohydrates in action: influencing infection and amplification of Staphylococcus aureus bacteriophages.	Vadym P, Volodymyr S.	BMC Microbiol	10.1186/s12866-025-04219-6	2025
	Natural Honey-Propolis Combinations with Health-Promoting Potential: Antibacterial Activity Against Foodborne Pathogens.	Sanchez-Martin V, Lopez-Parra MB, Iriondo-DeHond A, Wojdylo A, Michalska-Ciechanowska A, Haza AI, Morales P, Del Castillo MD.	Pharmaceuticals (Basel)	10.3390/ph18070988	2025
	Biocontrol Ability Against Harmful Microbial Contamination of Vegan Mortadella with an Ingredient of Oat Fermented by Lactiplantibacillus plantarum.	Moreno A, Goncalves A, Riolo M, Dopazo V, Calpe J, Meca G.	Foods	10.3390/foods14132195	2025
	Development of a Natural Coating Based on Fermented Milk Whey for Biopreservation of Cheese.	Moreno A, Calpe J, Dopazo V, Luz C, Quiles JM, Meca G.	Foods	10.3390/foods14132149	2025
	Devices containing allyl isothiocyanate against the growth of spoilage and mycotoxigenic fungi in mozzarella cheese	Tracz BL, Bordin K, Bocate KCP, Hara RV, Luz C, Macedo REF, Meca G, Luciano FB.	Journal of food processing and preservation.	10.1111/jfpp.13779	2018
	The effect of WWTP products amendments on Phaseolus vulgaris rhizosphere and its ability to inactivate clarithromycin.	Kotrbova L, Grabicova K, Svecova H, Stanova AV, Petrlikova M, Grabic R, Kodesova R, Chronakova A.	Sci Rep	10.1038/s41598-025-14953-6	2025
Genetics	Genomic and phenotypic characterization of staphylococci isolated from the skin of non-human primates.	Wildsmith C, Barratt S, Kerridge F, Thomas J, Negus D.	Microbiology (Reading)	10.1099/mic.0.001546	2025
Metabolism	Biobutanol production from apple pomace: the importance of pretreatment methods on the fermentability of lignocellulosic agro-food wastes.	Hijosa-Valsero M, Paniagua-Garcia AI, Diez-Antolinez R.	Appl Microbiol Biotechnol	10.1007/s00253-017-8522-z	2017
	Bioactive Naphtho-alpha-Pyranones from Two Endophytic Fungi of the Genus Polyphilus.	Wennrich JP, Sepanian E, Ebada SS, Llanos-Lopez NA, Ashrafi S, Maier W, Kurtan T, Stadler M.	Antibiotics (Basel)	10.3390/antibiotics12081273	2023
	Valorization of Coffee Cherry By-Products Through Fermentation by Human Intestinal Lactobacilli in Functional Fermented Milk Beverages.	Picon A, Campanero Y, Sanchez C, Alvarez I, Rodriguez-Minguez E.	Foods	10.3390/foods14010044	2024
Pathogenicity	Lactic acid bacteria: beyond fermentation to bio-protection against fungal spoilage and mycotoxins in food systems.	Rahman MS, Soltani S, LaPointe G, Karboune S, Fliss I.	Front Microbiol	10.3389/fmicb.2025.1580670	2025
Pathogenicity	Fungal decay and shelf life of oranges coated with chitosan and bergamot, thyme, and tea tree essential oils.	Chafer M, Sanchez-Gonzalez L, Gonzalez-Martinez Ch, Chiralt A.	J Food Sci	10.1111/j.1750-3841.2012.02827.x	2012
	Phenotypic and Genotypic Characterization of C. perfringens Isolates from Dairy Cows with a Pathological Puerperium.	Kronfeld H, Kemper N, Holzel CS.	Vet Sci	10.3390/vetsci9040173	2022
	Evaluation of properties of several cheese-ripening fungi for potential biotechnological applications	Chavez R, Roa A, Navarrete K, Trebotich J, Espinosa Y, Vaca I.	Mycoscience	10.1007/s10267-009-0004-4	2010
	Preparation of Sourdoughs Fermented with Isolated Lactic Acid Bacteria and Characterization of Their Antifungal Properties.	Lafuente C, Calpe J, Musto L, Nazareth TM, Dopazo V, Meca G, Luz C.	Foods	10.3390/foods12040686	2023
	Bioactive Compounds from an Endophytic Pezicula sp. Showing Antagonistic Effects against the Ash Dieback Pathogen	Demir O, Zeng H, Schulz B, Schrey H, Steinert M, Stadler M, Surup F.	Biomolecules		2023
	Secondary Metabolite Profile and Pharmacological Opportunities of Lettuce Plants following Selenium and Sulfur Enhancement.	Abdalla MA, Famuyide I, Wooding M, McGaw LJ, Muhling KH.	Pharmaceutics	10.3390/pharmaceutics14112267	2022
	Nutritional composition, heavy metal content and in vitro effect on the human gut microbiota of Talitrus saltator, an underutilized crustacean from the Atlantic coast.	Lopez-Santamarina A, Cardelle-Cobas A, Lamas A, Mondragon-Portocarrero A, Cepeda A, Miranda JM.	Front Nutr	10.3389/fnut.2022.943133	2022
	Antibacterial activity of solid surfaces is critically dependent on relative humidity, inoculum volume, and organic soiling.	Kaur H, Rosenberg M, Kook M, Danilian D, Kisand V, Ivask A.	FEMS Microbes	10.1093/femsmc/xtad022	2024
	Effect of Polydextrose on the Growth of Pediococcus pentosaceus as Well as Lactic Acid and Bacteriocin-like Inhibitory Substances (BLIS) Production.	Wanderley Porto MC, de Souza de Azevedo PO, Lourenco FR, Converti A, Vitolo M, Oliveira RPS.	Microorganisms	10.3390/microorganisms10101898	2022
Metabolism	The Influence of Ripeness on the Phenolic Content, Antioxidant and Antimicrobial Activities of Pumpkins (Cucurbita moschata Duchesne).	Mokhtar M, Bouamar S, Di Lorenzo A, Temporini C, Daglia M, Riazi A.	Molecules	10.3390/molecules26123623	2021
	Synthesis and antimicrobial activity of aminoalkyl resveratrol derivatives inspired by cationic peptides.	Cebrian R, Lucas R, Fernandez-Cantos MV, Slot K, Penalver P, Martinez-Garcia M, Parraga-Leo A, de Paz MV, Garcia F, Kuipers OP, Morales JC.	J Enzyme Inhib Med Chem	10.1080/14756366.2022.2146685	2023
Genetics	Comparative Genomics Provides Insights Into Genetic Diversity of Clostridium tyrobutyricum and Potential Implications for Late Blowing Defects in Cheese.	Podrzaj L, Burtscher J, Domig KJ.	Front Microbiol	10.3389/fmicb.2022.889551	2022
	Simplicilones A and B Isolated from the Endophytic Fungus Simplicillium subtropicum SPC3.	Anoumedem EGM, Mountessou BYG, Kouam SF, Narmani A, Surup F.	Antibiotics (Basel)	10.3390/antibiotics9110753	2020
	Effect of Lactobacillus cultures on microbiological, chemical and odour changes during storage of rainbow trout fillets	Katikou P, Ambrosiadis I, Georgantelis D, Koidis P, Georgakis SA.	J Sci Food Agric	10.1002/jsfa.2736	2007
	Enhancement of Textural and Sensory Characteristics of Wheat Bread Using a Chickpea Sourdough Fermented with a Selected Autochthonous Microorganism.	Nouska C, Hatzikamari M, Matsakidou A, Biliaderis CG, Lazaridou A.	Foods	10.3390/foods12163112	2023
	Bio-Preservative Potential of Microorganisms Isolated from Red Grape against Food Contaminant Fungi.	Dopazo V, Luz C, Manes J, Quiles JM, Carbonell R, Calpe J, Meca G.	Toxins (Basel)	10.3390/toxins13060412	2021
Biotechnology	Effect of Lactobacillus-protective cultures with bacteriocin-like inhibitory substances' producing ability on microbiological, chemical and sensory changes during storage of refrigerated vacuum-packaged sliced beef.	Katikou P, Ambrosiadis I, Georgantelis D, Koidis P, Georgakis SA.	J Appl Microbiol	10.1111/j.1365-2672.2005.02739.x	2005
	Quantitative and Compositional Study of Monospecies Biofilms of Spoilage Microorganisms in the Meat Industry and Their Interaction in the Development of Multispecies Biofilms.	Ripolles-Avila C, Garcia-Hernandez N, Cervantes-Huaman BH, Mazaheri T, Rodriguez-Jerez JJ.	Microorganisms	10.3390/microorganisms7120655	2019
Enzymology	Hydrolysis of muscle myofibrillar proteins by Lactobacillus curvatus and Lactobacillus sake.	Sanz Y, Fadda S, Vignolo G, Aristoy MC, Oliver G, Toldra F.	Int J Food Microbiol	10.1016/s0168-1605(99)00134-8	1999
Pathogenicity	Aflatoxins and A. flavus Reduction in Loaf Bread through the Use of Natural Ingredients.	Quiles JM, Torrijos R, Luciano FB, Manes J, Meca G.	Molecules	10.3390/molecules23071638	2018
Genetics	Increased prevalence of pathogenic bacteria in the gut microbiota of infants at risk of developing celiac disease: The PROFICEL study.	Olivares M, Benitez-Paez A, de Palma G, Capilla A, Nova E, Castillejo G, Varea V, Marcos A, Garrote JA, Polanco I, Donat E, Ribes-Koninckx C, Calvo C, Ortigosa L, Palau F, Sanz Y.	Gut Microbes	10.1080/19490976.2018.1451276	2018
Metabolism	An effective lacticin biopreservative in fresh pork sausage.	Scannell AG, Ross RP, Hill C, Arendt EK.	J Food Prot	10.4315/0362-028x-63.3.370	2000
	Biobutanol production from coffee silverskin.	Hijosa-Valsero M, Garita-Cambronero J, Paniagua-Garcia AI, Diez-Antolinez R.	Microb Cell Fact	10.1186/s12934-018-1002-z	2018
Metabolism	An Alteration in the Cecal Microbiota Composition by Feeding of 1-Kestose Results in a Marked Increase in the Cecal Butyrate Content in Rats.	Tochio T, Kitaura Y, Nakamura S, Sugawa C, Takahashi M, Endo A, Shimomura Y.	PLoS One	10.1371/journal.pone.0166850	2016
Genetics	Isolation by Miniaturized Culture Chip of an Antarctic bacterium Aequorivita sp. with antimicrobial and anthelmintic activity.	Palma Esposito F, Ingham CJ, Hurtado-Ortiz R, Bizet C, Tasdemir D, de Pascale D.	Biotechnol Rep (Amst)	10.1016/j.btre.2018.e00281	2018
	Assessment of Antioxidant and Antibacterial Properties on Meat Homogenates of Essential Oils Obtained from Four Thymus Species Achieved from Organic Growth.	Ballester-Costa C, Sendra E, Fernandez-Lopez J, Perez-Alvarez JA, Viuda-Martos M.	Foods	10.3390/foods6080059	2017
Enzymology	Purification and some properties of the pectin lyase from Penicillium italicum.	Alana A, Lama MJ, Serra JL.	FEBS Lett	10.1016/0014-5793(91)80325-w	1991
	A Human Lung-Associated Streptomyces sp. TR1341 Produces Various Secondary Metabolites Responsible for Virulence, Cytotoxicity and Modulation of Immune Response.	Herbrik A, Corretto E, Chronakova A, Langhansova H, Petraskova P, Hrdy J, Cihak M, Kristufek V, Bobek J, Petricek M, Petrickova K.	Front Microbiol	10.3389/fmicb.2019.03028	2019
Pathogenicity	Antimicrobial and anti-Quorum Sensing activities of selected medicinal plants of Ethiopia: Implication for development of potent antimicrobial agents.	Bacha K, Tariku Y, Gebreyesus F, Zerihun S, Mohammed A, Weiland-Brauer N, Schmitz RA, Mulat M.	BMC Microbiol	10.1186/s12866-016-0765-9	2016
Metabolism	Biohydrogenation of C20 polyunsaturated fatty acids by anaerobic bacteria.	Sakurama H, Kishino S, Mihara K, Ando A, Kita K, Takahashi S, Shimizu S, Ogawa J.	J Lipid Res	10.1194/jlr.m045450	2014
	Three Antifungal Proteins From Penicillium expansum: Different Patterns of Production and Antifungal Activity.	Garrigues S, Gandia M, Castillo L, Coca M, Marx F, Marcos JF, Manzanares P.	Front Microbiol	10.3389/fmicb.2018.02370	2018
	Gut microbiota composition in male rat models under different nutritional status and physical activity and its association with serum leptin and ghrelin levels.	Queipo-Ortuno MI, Seoane LM, Murri M, Pardo M, Gomez-Zumaquero JM, Cardona F, Casanueva F, Tinahones FJ.	PLoS One	10.1371/journal.pone.0065465	2013
Phylogeny	Gut microbiota in children with type 1 diabetes differs from that in healthy children: a case-control study.	Murri M, Leiva I, Gomez-Zumaquero JM, Tinahones FJ, Cardona F, Soriguer F, Queipo-Ortuno MI.	BMC Med	10.1186/1741-7015-11-46	2013
	Hydrolysis of pork muscle sarcoplasmic proteins by lactobacillus curvatus and lactobacillus sake.	Fadda S, Sanz Y, Vignolo G, Aristoy M, Oliver G, Toldra F.	Appl Environ Microbiol	10.1128/aem.65.2.578-584.1999	1999
Enzymology	Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces.	Matsuki T, Watanabe K, Fujimoto J, Miyamoto Y, Takada T, Matsumoto K, Oyaizu H, Tanaka R.	Appl Environ Microbiol	10.1128/aem.68.11.5445-5451.2002	2002
Metabolism	Hydrogen peroxide-forming NADH oxidase belonging to the peroxiredoxin oxidoreductase family: existence and physiological role in bacteria.	Nishiyama Y, Massey V, Takeda K, Kawasaki S, Sato J, Watanabe T, Niimura Y.	J Bacteriol	10.1128/jb.183.8.2431-2438.2001	2001
	Pectin Lyase Activity in a Penicillium italicum Strain.	Alana A, Alkorta I, Dominguez JB, Llama MJ, Serra JL.	Appl Environ Microbiol	10.1128/aem.56.12.3755-3759.1990	1990
Biotechnology	Increased Butanol Yields through Cosubstrate Fermentation of Jerusalem Artichoke Tubers and Crude Glycerol by Clostridium pasteurianum DSM 525.	Sarchami T, Rehmann L	ACS Omega	10.1021/acsomega.9b00879	2019
	A novel All-in-One electrolysis electrode and bioreactor enable better study of electrochemical effects and electricity-aided bioprocesses.	Utesch T, Zeng AP	Eng Life Sci	10.1002/elsc.201700198	2018
Metabolism	Extending CRISPR-Cas9 Technology from Genome Editing to Transcriptional Engineering in the Genus Clostridium.	Bruder MR, Pyne ME, Moo-Young M, Chung DA, Chou CP	Appl Environ Microbiol	10.1128/AEM.02128-16	2016
Metabolism	Influence of nutritional and operational parameters on the production of butanol or 1,3-propanediol from glycerol by a mutant Clostridium pasteurianum.	Gallardo R, Alves M, Rodrigues LR	N Biotechnol	10.1016/j.nbt.2016.03.002	2016
Metabolism	Optimization of fermentation condition favoring butanol production from glycerol by Clostridium pasteurianum DSM 525.	Sarchami T, Johnson E, Rehmann L	Bioresour Technol	10.1016/j.biortech.2016.02.062	2016
Genetics	Whole-genome sequence of an evolved Clostridium pasteurianum strain reveals Spo0A deficiency responsible for increased butanol production and superior growth.	Sandoval NR, Venkataramanan KP, Groth TS, Papoutsakis ET	Biotechnol Biofuels	10.1186/s13068-015-0408-7	2015
Metabolism	Continuous production of n-butanol by Clostridium pasteurianum DSM 525 using suspended and surface-immobilized cells.	Gallazzi A, Branska B, Marinelli F, Patakova P	J Biotechnol	10.1016/j.jbiotec.2015.10.008	2015
Genetics	Closed Genome Sequence of Clostridium pasteurianum ATCC 6013.	Rotta C, Poehlein A, Schwarz K, McClure P, Daniel R, Minton NP	Genome Announc	10.1128/genomeA.01596-14	2015
Genetics	Complete Genome Sequence of the Nitrogen-Fixing and Solvent-Producing Clostridium pasteurianum DSM 525.	Poehlein A, Grosse-Honebrink A, Zhang Y, Minton NP, Daniel R	Genome Announc	10.1128/genomeA.01591-14	2015
Metabolism	Electricity-driven metabolic shift through direct electron uptake by electroactive heterotroph Clostridium pasteurianum.	Choi O, Kim T, Woo HM, Um Y	Sci Rep	10.1038/srep06961	2014
Genetics	Improved Draft Genome Sequence of Clostridium pasteurianum Strain ATCC 6013 (DSM 525) Using a Hybrid Next-Generation Sequencing Approach.	Pyne ME, Utturkar S, Brown SD, Moo-Young M, Chung DA, Chou CP	Genome Announc	10.1128/genomeA.00790-14	2014
Metabolism	Homeoviscous response of Clostridium pasteurianum to butanol toxicity during glycerol fermentation.	Venkataramanan KP, Kurniawan Y, Boatman JJ, Haynes CH, Taconi KA, Martin L, Bothun GD, Scholz C	J Biotechnol	10.1016/j.jbiotec.2014.03.017	2014
	Development of an electrotransformation protocol for genetic manipulation of Clostridium pasteurianum.	Pyne ME, Moo-Young M, Chung DA, Chou CP	Biotechnol Biofuels	10.1186/1754-6834-6-50	2013
Genetics	Draft Genome Sequence of Type Strain Clostridium pasteurianum DSM 525 (ATCC 6013), a Promising Producer of Chemicals and Fuels.	Rappert S, Song L, Sabra W, Wang W, Zeng AP	Genome Announc	10.1128/genomeA.00232-12	2013
Metabolism	Impact of impurities in biodiesel-derived crude glycerol on the fermentation by Clostridium pasteurianum ATCC 6013.	Venkataramanan KP, Boatman JJ, Kurniawan Y, Taconi KA, Bothun GD, Scholz C	Appl Microbiol Biotechnol	10.1007/s00253-011-3766-5	2011
Metabolism	Optimization of medium compositions favoring butanol and 1,3-propanediol production from glycerol by Clostridium pasteurianum.	Moon C, Lee CH, Sang BI, Um Y	Bioresour Technol	10.1016/j.biortech.2011.08.094	2011
Biotechnology	Butanol production from thin stillage using Clostridium pasteurianum.	Ahn JH, Sang BI, Um Y	Bioresour Technol	10.1016/j.biortech.2011.01.046	2011
Metabolism	Arylsulfonates as sole source of sulfur for Clostridium pasteurianum DSM 12136.	Chien CC	J Basic Microbiol	10.1002/jobm.200410490	2005
Genetics	Organization of potential alternative nitrogenase genes from Clostridium pasteurianum.	Zinoni F, Robson RM, Robson RL	Biochim Biophys Acta	10.1016/0167-4781(93)90096-v	1993
Enzymology	Restriction endonucleases in Clostridium pasteurianum ATCC 6013 and C. thermohydrosulfuricum DSM 568.	Richards DF, Linnett PE, Oultram JD, Young M	J Gen Microbiol	10.1099/00221287-134-12-3151	1988
Phylogeny	Regeneration of protoplasts of Clostridium pasteurianum ATCC 6013.	Minton NP, Morris JG	J Bacteriol	10.1128/jb.155.1.432-434.1983	1983
Enzymology	Mobilization of granulose in Clostridium pasteurianum. Purification and properties of granulose phosphorylase.	Robson RL, Morris JG	Biochem J	10.1042/bj1440513	1974
Genetics	Description of Clostridium cagae sp. nov., Clostridium rectalis sp. nov. and Hathewaya massiliensis sp. nov., new anaerobic bacteria isolated from human stool samples.	Tall ML, Lo CI, Yimagou EK, Ndongo S, Pham TPT, Raoult D, Fournier PE, Fenollar F, Levasseur A.	New Microbes New Infect	10.1016/j.nmni.2020.100719	2020
Phylogeny	Clostridium arbusti sp. nov., an anaerobic bacterium isolated from pear orchard soil.	Jung MY, Park IS, Kim W, Kim HL, Paek WK, Chang YH.	Int J Syst Evol Microbiol	10.1099/ijs.0.013953-0	2010
Phylogeny	Clostridium akagii sp. nov. and Clostridium acidisoli sp. nov.: acid-tolerant, N2-fixing clostridia isolated from acidic forest soil and litter.	Kuhner CH, Matthies C, Acker G, Schmittroth M, Gossner AS, Drake HL.	Int J Syst Evol Microbiol	10.1099/00207713-50-2-873	2000
Phylogeny	Enterococcus lactis sp. nov., from Italian raw milk cheeses.	Morandi S, Cremonesi P, Povolo M, Brasca M.	Int J Syst Evol Microbiol	10.1099/ijs.0.030825-0	2012
	Unprecedented Antimicrobial and Cytotoxic Polyketides from Cultures of Diaporthe africana sp. nov.	Matio Kemkuignou B, Lambert C, Stadler M, Kouam Fogue S, Marin-Felix Y.	J Fungi (Basel)	10.3390/jof9070781	2023
Phylogeny	Clostridium prolinivorans sp. nov., a thermophilic bacterium isolated from an anaerobic reactor degrading propionate.	Huang Y, Wei Z, Cong L, Qiu Z, Chen R, Deng Y, Zhang Y, Fan H, Ma S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003523	2019

References

#123	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 525
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#22908	Min Young Jung, In-Soon Park, Wonyong Kim, Hong Lim Kim, Woon Kee Paek, Young-Hyo Chang: Clostridium arbusti sp. nov., an anaerobic bacterium isolated from pear orchard soil. IJSEM 60: 2231 - 2235 2010 ( DOI 10.1099/ijs.0.013953-0 , PubMed 19915114 )
#50524	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 31328
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium pasteurianum (DSM 525, ATCC 6013, IMG 1584b)

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