Caloramator viterbiensis (DSM 13723, ATCC PTA 584, JW/MS-VS5)

Name: Caloramator viterbiensis (DSM 13723, ATCC PTA 584, JW/MS-VS5)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2521

Type strain

Strain Designation JW/MS-VS5

Culture col. no. DSM 13723 ATCC PTA 584 JW/MS-VS5

NCBI tax ID(s) 1121263 112729

Special Collections DSMZ

Links

Caloramator viterbiensis JW/MS-VS5 is an anaerobe, thermophilic prokaryote that was isolated from slightly alkaline hot spring.

anaerobe thermophilic 16S sequence

Name and taxonomic classification

SI-ID 100578

DSM 13723

@ref 20215

Last LPSN update 2025-12-16 09:47:20

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Caloramator

Species Caloramator viterbiensis

Full scientific name Caloramator viterbiensis corrig. Seyfried et al. 2002

Synonyms (1)

Caloramator viterbensis

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5130	CALORAMATOR VITERBIENSIS MEDIUM (DSMZ Medium 947)		Medium recipe at MediaDive	Name: CALORAMATOR VITERBIENSIS MEDIUM (DSMZ Medium 947) Composition: Glycerol 2.99103 g/l KH2PO4 1.99402 g/l NaHCO3 0.997009 g/l (NH4)2SO4 0.498504 g/l NH4Cl 0.498504 g/l Yeast extract 0.299103 g/l Na2S x 9 H2O 0.129611 g/l L-Cysteine HCl x H2O 0.129611 g/l MgCl2 x 6 H2O 0.0398804 g/l CaCl2 x 2 H2O 0.0398804 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5130	positive	growth	55	thermophilic

Physiology and metabolism

Oxygen tolerance

5130

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Thermal spring
#Condition	#Alkaline	-
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5130	slightly alkaline hot spring	Bagnaccio near Viterbo	Italy	ITA	Europe

Taxonmaps

69479

Global distribution of 16S sequence AF181848 (>99% sequence identity) for Caloramator from Microbeatlas

Aquatic Samples	76
Soil Samples	28
Animal Samples	112
Plant Samples	3
Total Samples	219

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5130	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5130	Caloramator viterbiensis 16S ribosomal RNA gene, partial sequence	AF181848	1480		1121263

GC content

@ref	GC-content (mol%)	Method
5130	32	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fonticella tunisiensis gen. nov., sp. nov., isolated from a hot spring.	Fraj B, Ben Hania W, Postec A, Hamdi M, Ollivier B, Fardeau ML	Int J Syst Evol Microbiol	10.1099/ijs.0.041947-0	2012
Phylogeny	Caloramator quimbayensis sp. nov., an anaerobic, moderately thermophilic bacterium isolated from a terrestrial hot spring.	Rubiano-Labrador C, Baena S, Diaz-Cardenas C, Patel BKC	Int J Syst Evol Microbiol	10.1099/ijs.0.037937-0	2012
Phylogeny	Caloramator viterbensis sp. nov., a novel thermophilic, glycerol-fermenting bacterium isolated from a hot spring in Italy.	Seyfried M, Lyon D, Rainey FA, Wiegel J	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1177	2002

References

#5130	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13723
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Caloramator viterbiensis (DSM 13723, ATCC PTA 584, JW/MS-VS5)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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