Caloramator coolhaasii (DSM 12679, KCTC 15121, Z)

Name: Caloramator coolhaasii (DSM 12679, KCTC 15121, Z)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2520

Type strain

Strain Designation Z

Culture col. no. DSM 12679 KCTC 15121 Z

NCBI tax ID(s) 95159

Special Collections DSMZ KCTC

Links

Caloramator coolhaasii Z is an anaerobe, thermophilic, rod-shaped prokaryote that was isolated from anaerobic thermophilic granular sludge.

rod-shaped anaerobe thermophilic 16S sequence

Name and taxonomic classification

SI-ID 49340

KCTC 15121,DSM 12679

@ref 20215

Last LPSN update 2025-12-16 09:47:20

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Caloramator

Species Caloramator coolhaasii

Full scientific name Caloramator coolhaasii Plugge et al. 2000

Morphology

Cell morphology

@ref	Cell shape	Gram stain
67771	rod-shaped
67771	filament-shaped
67771		negative

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4789	WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)		Medium recipe at MediaDive	Name: WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339) Composition: dehydrated Wilkins-Chalgren medium 33.0 g/l L-Cysteine HCl 0.3 g/l Sodium resazurin 0.0005 g/l Distilled water
4789	CALORAMATOR MEDIUM (DSMZ Medium 788)		Medium recipe at MediaDive	Name: CALORAMATOR MEDIUM (DSMZ Medium 788) Composition: D-Glucose 4.98504 g/l NH4Cl 2.39282 g/l Na2CO3 1.49551 g/l Na2HPO4 x 2 H2O 0.518445 g/l KH2PO4 0.408774 g/l MgCl2 x 6 H2O 0.398804 g/l Na2S x 9 H2O 0.299103 g/l CaCl2 x 2 H2O 0.199402 g/l Yeast extract 0.199402 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l Pyridoxine hydrochloride 0.000299103 g/l Nicotinic acid 0.000199402 g/l Thiamine-HCl x 2 H2O 0.000199402 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Calcium pantothenate 9.97009e-05 g/l Vitamin B12 9.97009e-05 g/l p-Aminobenzoic acid 7.97607e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l D-(+)-biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4789	positive	growth	55	thermophilic
67771	positive	growth	55	thermophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
4789	anaerobe
67771	anaerobe

Spore formation

67771

Spore formationno

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Waste	#Activated sludge
#Condition	#Anoxic (anaerobic)	-
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
4789	anaerobic thermophilic granular sludge	Netherlands	NLD	Europe
67771	From anaerobic thermophilic granular sludge	Netherlands	NLD	Europe

Taxonmaps

69479

Global distribution of 16S sequence NR_024955 (>99% sequence identity) for Thermobrachium from Microbeatlas

Aquatic Samples	133
Soil Samples	26
Animal Samples	8
Plant Samples	4
Total Samples	171

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4789	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4789	Caloramator coolhaasii 16S ribosomal RNA gene, partial sequence	AF104215	1454		95159
67771	Caloramator coolhaasii strain Z 16S ribosomal RNA, partial sequence	NR_024955	1454		95159

GC content

@ref	GC-content (mol%)	Method
4789	31.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Distribution of Hydrogen-Producing Bacteria in Tibetan Hot Springs, China.	Ma L, Wu G, Yang J, Huang L, Phurbu D, Li WJ, Jiang H.	Front Microbiol	10.3389/fmicb.2021.569020	2021
Phylogeny	Bacterial ecology of abattoir wastewater treated by an anaerobic digestor.	Jabari L, Gannoun H, Khelifi E, Cayol JL, Godon JJ, Hamdi M, Fardeau ML.	Braz J Microbiol	10.1016/j.bjm.2015.11.029	2016
	Enrichment of thermophilic syntrophic anaerobic glutamate-degrading consortia using a dialysis membrane reactor.	Plugge CM, Stams AJ.	Microb Ecol	10.1007/s00248-001-0047-3	2002
Metabolism	Elucidation of the pathways of catabolic glutamate conversion in three thermophilic anaerobic bacteria.	Plugge CM, van Leeuwen JM, Hummelen T, Balk M, Stams AJ.	Arch Microbiol	10.1007/s002030100286	2001
Metabolism	Biogenic mineral production by a novel arsenic-metabolizing thermophilic bacterium from the Alvord Basin, Oregon.	Ledbetter RN, Connon SA, Neal AL, Dohnalkova A, Magnuson TS.	Appl Environ Microbiol	10.1128/aem.00371-07	2007
Phylogeny	Development of fluorescent adjacent hybridization probes and their application in real-time PCR for the simultaneous detection and identification of Fervidobacterium and Caloramator.	Connolly GR, Patel BKC	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1837	2002
Metabolism	Caloramator coolhaasii sp. nov., a glutamate-degrading, moderately thermophilic anaerobe.	Plugge CM, Zoetendal EG, Stams AJ.	Int J Syst Evol Microbiol	10.1099/00207713-50-3-1155	2000

References

#4789	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12679
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Caloramator coolhaasii (DSM 12679, KCTC 15121, Z)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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