Name: Teredinibacter turnerae T7902
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24757

Type strain:

Species: Teredinibacter turnerae

Strain Designation: T7902

Culture col. no.: DSM 15152, ATCC 39867

Strain history: <- J. B. Waterbury; T7902. Accodring to the depositor this deposit does not resemble the original strain, but 16S rRNA gene sequencing confirms that this is a strain of Teredinibacter turnerae and the DSM number is used in the publication

NCBI tax ID(s): 2426 (species)

SI-ID 41577

ATCC 39867, DSM 15152

Other strains from Teredinibacter turnerae

T. turnerae T7901, DSM 15142
T. turnerae T7903, DSM 15143
T. turnerae T8201, DSM 15144
T. turnerae T8602, DSM 15167
T. turnerae T8402, DSM 15175

Section

Teredinibacter turnerae T7902 is an aerobe, chemoheterotroph, mesophilic bacterium that was isolated from Lyrodus pedicellatus . Laboratory culture, original specimens from Long Beach, CA.

Gram-negative
motile
rod-shaped
aerobe
chemoheterotroph
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Cellvibrionales*
	Family	*Cellvibrionaceae*
	Genus	*Teredinibacter*
	Species	**Teredinibacter turnerae**
	Full Scientific Name (LPSN)	Teredinibacter turnerae Distel et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #43378]	Gram stain	negative

[Ref.: #43378]	Cell length	3-6 µm

[Ref.: #43378]	Cell width	0.4-0.6 µm

[Ref.: #43378]	Cell shape	rod-shaped

[Ref.: #43378]	Motility	yes

[Ref.: #43378]	Flagellum arrangement	polar

[Ref.: #43378]	Colony color	translucent, yellow-brown colour with age
[Ref.: #43378]	Cultivation medium used	SBM agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20855]

Culture medium

TEREDINIBACTER TURNERAE MEDIUM (DSMZ Medium 967)

[Ref.: #20855]

Culture medium growth

[Ref.: #20855]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20855]

Culture medium composition

expand / minimize

[Ref.: #43378]

Culture medium

SBM agar

[Ref.: #43378]

Culture medium growth

[Ref.: #43378]

Culture medium

SBM agar medium

[Ref.: #43378]

Culture medium growth

	Kind of temperature		Temperature
[Ref.: #20855]		growth	28 °C
[Ref.: #43378]	no	growth	40 °C
[Ref.: #43378]	no	growth	15 °C
[Ref.: #43378]		optimum	30-35 °C
[Ref.: #43378]		growth	20-30 °C

[Ref.: #20855]	Temperature range	mesophilic
[Ref.: #43378]	Temperature range	thermophilic
[Ref.: #43378]	Temperature range	psychrophilic
[Ref.: #43378]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43378]			optimum	8.5
[Ref.: #43378]			growth	6-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43378]

Oxygen tolerance

aerobe

[Ref.: #43378]

Nutrition type

chemoheterotroph

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43378]		NaCl		growth	0.1-0.6	M
[Ref.: #43378]		NaCl		optimum	0.3	M

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43378]	acetate ChEBI	+	growth
[Ref.: #43378]	carboxymethylcellulose ChEBI	+	growth
[Ref.: #43378]	cellobiose ChEBI	+	growth
[Ref.: #43378]	cellobiose ChEBI	+	builds acid from
[Ref.: #43378]	cellulose ChEBI	+	growth
[Ref.: #43378]	cellulose ChEBI	+	builds acid from
[Ref.: #43378]	fructose ChEBI	+	growth
[Ref.: #43378]	fructose ChEBI	+	builds acid from
[Ref.: #43378]	glucose ChEBI	+	growth
[Ref.: #43378]	glucose ChEBI	+	builds acid from
[Ref.: #43378]	L-glutamate ChEBI	+	growth
[Ref.: #43378]	pectin ChEBI	+	growth
[Ref.: #43378]	pectin ChEBI	+	builds acid from
[Ref.: #43378]	pyruvate ChEBI	+	growth
[Ref.: #43378]	salicin ChEBI	+	growth
[Ref.: #43378]	salicin ChEBI	+	builds acid from
[Ref.: #43378]	succinate ChEBI	+	growth
[Ref.: #43378]	sucrose ChEBI	+	growth
[Ref.: #43378]	sucrose ChEBI	+	builds acid from
[Ref.: #43378]	xylan ChEBI	+	growth
[Ref.: #43378]	xylose ChEBI	+	growth
[Ref.: #43378]	xylose ChEBI	+	builds acid from
[Ref.: #43378]	yeast extract	+	growth
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20855]	Sample type/isolated from	Lyrodus pedicellatus (gill symbiont). Laboratory culture, original specimens from Long Beach, CA
[Ref.: #20855]	Host species	Lyrodus pedicellatus
[Ref.: #20855]	Geographic location (country and/or sea, region)	CA, Long Beach
[Ref.: #20855]	Country	USA
[Ref.: #20855]	Country ISO 3 Code	USA
[Ref.: #20855]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Laboratory	#Lab enrichment
#Host	#Other	#Extracellular
#Host	#Invertebrates (Other)	#Mollusca

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20855]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20855]	Teredinibacter turnerae 16S small subunit ribosomal RNA gene, partial sequence	AY028398	1469	ENA	2426 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Teredinibacter turnerae T7902	GCA_000379165	scaffold	GenBank	1056820 tax ID	*
[Ref.: #66792]	Teredinibacter turnerae T7902	1056820.3	wgs	PATRIC	1056820 tax ID	*
[Ref.: #66792]	Teredinibacter turnerae T7902	2513237099	draft	JGI IMG/M	1056820 tax ID	*

[Ref.: #20855]	GC-content	49-51 mol%
[Ref.: #43378]	GC-content	49-51 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Teredinibacter turnerae T7902 T7902 NCBI: GCA_000379165.1
[Ref.: #69480]	motile	yes	89.287	yes
[Ref.: #69480]	flagellated	yes	91.232	yes
[Ref.: #69480]	gram-positive	no	99.071	yes
[Ref.: #69480]	anaerobic	no	98.874	yes
[Ref.: #69480]	aerobic	yes	85.819	no
[Ref.: #69480]	halophile	no	51.624	no
[Ref.: #69480]	spore-forming	no	94.015	no
[Ref.: #69480]	thermophile	no	99.246	no
[Ref.: #69480]	glucose-util	yes	91.955	no
[Ref.: #69480]	glucose-ferment	no	79.571	no

Availability in culture collections External links

[Ref.: #20855]

Culture collection no.

DSM 15152, ATCC 39867

[Ref.: #88584]

SI-ID 41577

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae.	Lucena T, Arahal DR, Sanz-Saez I, Acinas SG, Sanchez O, Aznar R, Pedros-Alio C, Pujalte MJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003906	2020	*
Phylogeny	Identification and characterization of cellobiose 2-epimerases from various aerobes.	Ojima T, Saburi W, Yamamoto T, Mori H, Matsui H	Biosci Biotechnol Biochem	10.1271/bbb.120742	2013	*
Phylogeny	Pseudoteredinibacter isoporae gen. nov., sp. nov., a marine bacterium isolated from the reef-building coral Isopora palifera.	Chen MH, Sheu SY, Arun AB, Young CC, Chen CA, Wang JT, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.024190-0	2010	*
Phylogeny	Saccharophagus degradans gen. nov., sp. nov., a versatile marine degrader of complex polysaccharides.	Ekborg NA, Gonzalez JM, Howard MB, Taylor LE, Hutcheson SW, Weiner RM	Int J Syst Evol Microbiol	10.1099/ijs.0.63627-0	2005	*
Phylogeny	Agarilytica rhodophyticola gen. nov., sp. nov., isolated from Gracilaria blodgettii.	Ling SK, Xia J, Liu Y, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002193	2017	*
Phylogeny	Marinibactrum halimedae gen. nov., sp. nov., a gammaproteobacterium isolated from a marine macroalga.	Nishijima M, Adachi K, Sano H, Yamasato K	Int J Syst Evol Microbiol	10.1099/ijsem.0.000502	2015	*
Phylogeny	Maricurvus nonylphenolicus gen. nov., sp. nov., a nonylphenol-degrading bacterium isolated from seawater.	Iwaki H, Takada K, Hasegawa Y	FEMS Microbiol Lett	10.1111/j.1574-6968.2011.02471.x	2011	*
Enzymology	A novel salt-tolerant endo-beta-1,4-glucanase Cel5A in Vibrio sp. G21 isolated from mangrove soil.	Gao Z, Ruan L, Chen X, Zhang Y, Xu X	Appl Microbiol Biotechnol	10.1007/s00253-010-2554-y	2010	*
Metabolism	CelAB, a multifunctional cellulase encoded by Teredinibacter turnerae T7902T, a culturable symbiont isolated from the wood-boring marine bivalve Lyrodus pedicellatus.	Ekborg NA, Morrill W, Burgoyne AM, Li L, Distel DL	Appl Environ Microbiol	10.1128/AEM.00876-07	2007	*
Phylogeny	Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae).	Distel DL, Morrill W, MacLaren-Toussaint N, Franks D, Waterbury J	Int J Syst Evol Microbiol	10.1099/00207713-52-6-2261	2002	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20855

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15152

#43378

Daniel L. Distel, Wendy Morrill, Noelle MacLaren-Toussaint, Dianna Franks, John Waterbury: Teredinibacter turnerae gen. nov., sp. nov., a dinitrogen-fixing, cellulolytic, endosymbiotic gamma-proteobacterium isolated from the gills of wood-boring molluscs (Bivalvia: Teredinidae). IJSEM 52: 2261 - 2269 2002 ( DOI 10.1099/00207713-52-6-2261 , PubMed 12508896 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#88584

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID41577.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Teredinibacter turnerae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Teredinibacter turnerae T7902 T7902

Change proposal

Change proposal