Zunongwangia mangrovi (DSM 24499, KCTC 23496, LMG 26237)

Name: Zunongwangia mangrovi (DSM 24499, KCTC 23496, LMG 26237)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24050

Type strain

Strain Designation P2E16

Culture col. no. DSM 24499 KCTC 23496 LMG 26237 P2E16 UCCCB40

NCBI tax ID(s) 1334022

Special Collections DSMZ KCTC UCCCB

History <- N. Ramesh Kumar, NCCS Complex, Univ. of Pune Campus, India; P2E16 <- N Ramesh Kumar, MCCP, Pune Univ., India Rameshkumar N. National Institute for Interdisciplinary Science and Technology (CSIR) and Hokkaido University

Links

Zunongwangia mangrovi P2E16 is an aerobe, rod-shaped bacterium that was isolated from rhizosphere of the mangrove Avicennia marina.

rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 272955

LMG 26237,KCTC 23496

@ref 20215

Last LPSN update 2026-02-09 11:23:52

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Zunongwangia

Species Zunongwangia mangrovi

Full scientific name Zunongwangia mangrovi Rameshkumar et al. 2014

Morphology

Cell morphology

@ref	Cell shape	Gram stain	Confidence
67771	rod-shaped
67771		negative
125438		negative	98
125439		negative	98.2

Colony morphology

21173

Incubation period2-3 days

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67771	positive	growth	25-28
67772	positive	optimum	25-28
67772	positive	minimum	20
67772	positive	maximum	37

Culture pH

@ref	Ability	Type	PH	PH range
67772	positive	maximum	9.0	alkaliphile
67772	positive	minimum	6.0
67772	positive	optimum	7.0-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125439	obligate aerobe	96.6

Spore formation

@ref	Spore formation	Confidence
67771
125438		91.423
125439		91.4

Observation

67771

Observationquinones: MK-6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Mangrove
#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Rhizosphere

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Sampling date
21173	rhizosphere of the mangrove Avicennia marina	Avicennia marina	Tamil Nadu, Devipattinam	India	IND	Asia
67771	From mangrove rhizosphere		Tamil Nadu	India	IND	Asia
67772	Rhizosphere of the mangrove Avicennia marina		Tamil Nadu, Devipattinam	India	IND	Asia	2010

Taxonmaps

69479

Global distribution of 16S sequence KC907713 (>99% sequence identity) for Zunongwangia mangrovi from Microbeatlas

Aquatic Samples	947
Soil Samples	22
Animal Samples	41
Plant Samples	8
Total Samples	1018

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21173	1	Risk group (German classification)
67772	1

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67772	IMG-taxon 2622736505 annotated assembly for Zunongwangia mangrovi DSM 24499	contig	GCA_900112105	1334022.3	2622736505	1334022	73.52

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21173	Zunongwangia mangrovi strain P2E16 16S ribosomal RNA gene, partial sequence	KC907713	1470		1334022

GC content

@ref	GC-content (mol%)	Method
21173	34.3	high performance liquid chromatography (HPLC)
67771	34.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Zunongwangia mangrovi DSM 24499
NCBI: GCA_900112105

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	91.40	no
125439	motility	BacteriaNetⓘ	no	67.60	no
125439	gram_stain	BacteriaNetⓘ	negative	98.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Zunongwangia mangrovi strain DSM 24499
PATRIC: 1334022.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.00	yes
125438	anaerobic	anaerobicⓘ	no	96.95	yes
125438	spore-forming	spore-formingⓘ	no	91.42	yes
125438	aerobic	aerobicⓘ	yes	85.15	yes
125438	thermophilic	thermophileⓘ	no	97.92	yes
125438	flagellated	motile2+ⓘ	no	89.75	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Zunongwangia endophytica sp. nov., an endophyte isolated from the salt marsh plant, Halimione portulacoides, and emended description of the genus Zunongwangia.	Fidalgo C, Martins R, Proenca DN, Morais PV, Alves A, Henriques I	Int J Syst Evol Microbiol	10.1099/ijsem.0.002069	2017
Phylogeny	Zunongwangia mangrovi sp. nov., isolated from mangrove (Avicennia marina) rhizosphere, and emended description of the genus Zunongwangia.	Rameshkumar N, Krishnan R, Lang E, Matsumura Y, Sawabe T, Sawabe T	Int J Syst Evol Microbiol	10.1099/ijs.0.053512-0	2013
Phylogeny	Zunongwangia flava sp. nov., belonging to the family Flavobacteriaceae, isolated from Salicornia europaea.	Cho ES, Cha IT, Choi HJ, Roh SW, Nam YD, Seo SM, Seo MJ	J Microbiol	10.1007/s12275-018-8231-z	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21173	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24499
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Zunongwangia mangrovi (DSM 24499, KCTC 23496, LMG 26237)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900112105

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media