Shouchella shacheensis (DSM 26902, CICC 10559, KCTC 33145)

Name: Shouchella shacheensis (DSM 26902, CICC 10559, KCTC 33145)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23666

Type strain

Strain Designation HNA-14

Culture col. no. DSM 26902 CICC 10559 KCTC 33145 SCULCB HNA-14 HNA-14

NCBI tax ID(s) 1649580

Special Collections DSMZ KCTC

History <- R. Ye, Sichuan Univ., College of Light Ind., Textile and Food Eng., Chengdu, China; HNA-14 <- L. Yang <- Renyuan Ye, China

Links

Shouchella shacheensis HNA-14 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from saline-alkali soil.

spore-forming motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401371

KCTC 33145,DSM 26902

@ref 20215

Last LPSN update 2025-12-16 09:52:42

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Shouchella

Species Shouchella shacheensis

Full scientific name Shouchella shacheensis (Lei et al. 2014) Joshi et al. 2022

Synonyms (2)

Bacillus shacheensis
Alkalihalobacillus shacheensis

Morphology

Cell morphology

@ref	Cell shape	Motility	Gram stain
67771	rod-shaped
67771			positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20405	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: NaCl 100.0 g/l Agar 15.0 g/l Casein peptone 15.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67771	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

67771

Oxygen toleranceaerobe

Spore formation

@ref	Type of spore	Confidence
67771	spore
125439		91.5
125438		92.532

Observation

67771

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Condition	#Alkaline	-
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20405	saline-alkali soil	Xinjiang Province, Shache County	China	CHN	Asia
67771	From a saline-alkali soil sample collected in Shache County	Xinjiang Province	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence HQ620634 (>99% sequence identity) for Alkalihalobacillus shacheensis subclade from Microbeatlas

Aquatic Samples	5
Soil Samples	9
Animal Samples	13
Plant Samples	7
Total Samples	34

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20405	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	ASM148496v1 assembly for Shouchella shacheensis HNA-14	scaffold	GCA_001484965	2775507147	1649580	58.85

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20405	Shouchella shacheensis strain HNA-14 16S ribosomal RNA gene, partial sequence	HQ620634	1570		1649580

GC content

@ref	GC-content (mol%)	Method
20405	46.8	high performance liquid chromatography (HPLC)
67771	48.6

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Shouchella shacheensis HNA-14
NCBI: GCA_001484965

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	91.50	no
125439	motility	BacteriaNetⓘ	yes	89.40	no
125439	gram_stain	BacteriaNetⓘ	variable	87.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	82.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alkalihalobacillus shacheensis HNA-14
NCBI: GCA_001484965.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	80.16	no
125438	anaerobic	anaerobicⓘ	no	98.78	yes
125438	aerobic	aerobicⓘ	yes	78.06	yes
125438	spore-forming	spore-formingⓘ	yes	92.53	yes
125438	thermophilic	thermophileⓘ	no	92.30	no
125438	flagellated	motile2+ⓘ	yes	86.37	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Adaptations of Bacillus shacheensis HNA-14 required for long-term survival under osmotic challenge: a multi-omics perspective.	Long X, Tian J, Liao X, Tian Y	RSC Adv	10.1039/c8ra05472j	2018
	Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera.	Joshi A, Thite S, Karodi P, Joseph N, Lodha T.	Front Microbiol	10.3389/fmicb.2021.722369	2021
Phylogeny	Bacillus shacheensis sp. nov., a moderately halophilic bacterium isolated from a saline-alkali soil.	Lei Z, Qiu P, Ye R, Tian J, Liu Y, Wang L, Tang SK, Li WJ, Tian Y	J Gen Appl Microbiol	DN/JST.JSTAGE/jgam/60.101	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20405	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26902
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Shouchella shacheensis (DSM 26902, CICC 10559, KCTC 33145)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001484965

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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