Name: Bhargavaea ullalensis ZMA-19
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23197

Type strain:

Species: Bhargavaea ullalensis

Strain Designation: ZMA-19

Culture col. no.: DSM 26128, CCM 8429, LMG 27071, ZMA 19, CIP 110542

Strain history: CIP <- 2012, P. Kämpfer, Giessen Univ., Giessen, Germany: strain ZMA-19

NCBI tax ID(s): 1265685 (species)

SI-ID 380983

LMG 27071, CCM 8429, CIP 110542

Section

Bhargavaea ullalensis ZMA-19 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from coastal sand.

Gram-positive
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Bhargavaea*
	Species	**Bhargavaea ullalensis**
	Full Scientific Name (LPSN)	Bhargavaea ullalensis Glaeser et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30812]	Gram stain	positive
[Ref.: #123713]	Gram stain	positive

[Ref.: #30812]	Cell length	2.5 µm

[Ref.: #30812]	Cell width	0.9 µm

[Ref.: #30812]	Cell shape	rod-shaped
[Ref.: #123713]	Cell shape	oval-shaped

[Ref.: #30812]	Motility	no
[Ref.: #123713]	Motility	no

[Ref.: #30812]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #40761]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #40761]

Culture medium growth

[Ref.: #40761]

Culture medium composition

expand / minimize

[Ref.: #123713]

Culture medium

CIP Medium 72

[Ref.: #123713]

Culture medium growth

[Ref.: #123713]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #30812]	growth	15-50 °C
[Ref.: #30812]	optimum	30 °C
[Ref.: #40761]	growth	25 °C

[Ref.: #30812]	Temperature range	mesophilic
[Ref.: #40761]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30812]			optimum	7.5
[Ref.: #30812]			growth	5.5-11

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30812]

Oxygen tolerance

aerobe

[Ref.: #30812]

Ability of spore formation

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30812]	acetate ChEBI	+	carbon source
[Ref.: #30812]	citrate ChEBI	+	carbon source
[Ref.: #30812]	glutamate ChEBI	+	carbon source
[Ref.: #30812]	lactate ChEBI	+	carbon source
[Ref.: #30812]	malate ChEBI	+	carbon source
[Ref.: #30812]	pyruvate ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30812]	catalase	+	1.11.1.6
[Ref.: #30812]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30812]	gelatinase	+
[Ref.: #30812]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #19358]	Sample type/isolated from	coastal sand
[Ref.: #19358]	Geographic location (country and/or sea, region)	Karnataka State, Dakshina Kannada, Mangalore City, Ullal coast (12° 47' 38. 4'' N 74° 50' 57.8'' E)
[Ref.: #19358]	Country	India
[Ref.: #19358]	Country ISO 3 Code	IND
[Ref.: #19358]	Continent	Asia
[Ref.: #19358]	Geographic location	12.7940°/74.8494°

[Ref.: #123713]	Sample type/isolated from	Environment, Soil, coastal sand
[Ref.: #123713]	Country	Taiwan
[Ref.: #123713]	Country ISO 3 Code	TWN
[Ref.: #123713]	Continent	Asia
[Ref.: #123713]	Isolation date	2010
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Sandy

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX144975 (>99% sequence identity) for Bhargavaea from Microbeatlas

Aquatic Samples	121
Soil Samples	150
Animal Samples	322
Plant Samples	40
Total Samples	633

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #19358]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123713]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #19358]	Bhargavaea ullalensis strain ZMA 19 16S ribosomal RNA gene, partial sequence	JX144975	1430	ENA	1265685 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bhargavaea ullalensis DSM 26128	2928332132	draft	JGI IMG/M	1265685 tax ID	*

Availability in culture collections External links

[Ref.: #19358]

Culture collection no.

DSM 26128, CCM 8429, LMG 27071, ZMA 19, CIP 110542

[Ref.: #87427]

SI-ID 380983

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bhargavaea changchunensis sp. nov. isolated from soil in China.	Tian FH, Fan DY, Zhang C, Jia CW, Gao W, Li Y, Li CT	Arch Microbiol	10.1007/s00203-018-1563-6	2018	*
Phylogeny	Bhargavaea ullalensis sp. nov., isolated from coastal sand.	Glaeser SP, Arun AB, Rekha PD, Prabhu S, Busse HJ, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.045062-0	2012	*

References

#19358

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26128

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30812

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27143 (see below)

#40761 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#87427

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID380983.1 )

#123713 Collection of Institut Pasteur ; Curators of the CIP; CIP 110542

#27143

IJSEM 2450 2013 ( DOI 10.1099/ijs.0.045062-0 , PubMed 23243092 )

* These data were automatically processed and therefore are not curated

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