Asticcacaulis excentricus CB 48 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from pond water.
Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Caulobacterales |
| Family Caulobacteraceae |
| Genus Asticcacaulis |
| Species Asticcacaulis excentricus |
| Full scientific name Asticcacaulis excentricus Poindexter 1964 (Approved Lists 1980) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1730 | CAULOBACTER MEDIUM (DSMZ Medium 595) | Medium recipe at MediaDive | Name: CAULOBACTER MEDIUM (DSMZ Medium 595) Composition: Agar 15.0 g/l Bacto peptone 2.0 g/l Yeast extract 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Tap water | ||
| 39648 | MEDIUM 374 - for Rhodopseudomonas rhenobacensis | Distilled water make up to (944.500 ml);Agar (20.000 g);Yeast extract (1.000 ml);Solution A - M00720 (40.000 ml);Solution B - M00721 (10.000 ml);Solution C - M00722 (2.000 ml);Solution D - M00723 (1.000 ml);Solution E - M00724 (1.500 ml);Solution trace el | |||
| 119151 | CIP Medium 374 | Medium recipe at CIP |
| 119151 | Oxygen toleranceobligate aerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 119151 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | + | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | + | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 119151 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | + | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | + | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | + | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | + | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 119151 | 17632 ChEBI | nitrate | - | reduction | |
| 119151 | 17632 ChEBI | nitrate | - | respiration | |
| 119151 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | + | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 119151 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119151 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119151 | amylase | - | ||
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 119151 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119151 | caseinase | - | 3.4.21.50 | |
| 119151 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 119151 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119151 | gelatinase | - | ||
| 119151 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 119151 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 119151 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119151 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119151 | oxidase | + | ||
| 119151 | protease | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 119151 | tryptophan deaminase | - | ||
| 119151 | tween esterase | + | ||
| 119151 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | Entner Doudoroff pathway | 100 | 10 of 10 | ||
| 66794 | ribulose monophosphate pathway | 100 | 2 of 2 | ||
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | kanosamine biosynthesis II | 100 | 2 of 2 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | proline metabolism | 90.91 | 10 of 11 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | citric acid cycle | 85.71 | 12 of 14 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | purine metabolism | 82.98 | 78 of 94 | ||
| 66794 | d-xylose degradation | 81.82 | 9 of 11 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | metabolism of amino sugars and derivatives | 80 | 4 of 5 | ||
| 66794 | cellulose degradation | 80 | 4 of 5 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | degradation of hexoses | 77.78 | 14 of 18 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | NAD metabolism | 77.78 | 14 of 18 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | lactate fermentation | 75 | 3 of 4 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | pyrimidine metabolism | 73.33 | 33 of 45 | ||
| 66794 | alanine metabolism | 72.41 | 21 of 29 | ||
| 66794 | tyrosine metabolism | 71.43 | 10 of 14 | ||
| 66794 | heme metabolism | 71.43 | 10 of 14 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 71.43 | 5 of 7 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | flavin biosynthesis | 66.67 | 10 of 15 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | allantoin degradation | 66.67 | 6 of 9 | ||
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | ||
| 66794 | degradation of sugar acids | 64 | 16 of 25 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | vitamin B6 metabolism | 63.64 | 7 of 11 | ||
| 66794 | tryptophan metabolism | 63.16 | 24 of 38 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | lipid metabolism | 61.29 | 19 of 31 | ||
| 66794 | degradation of pentoses | 60.71 | 17 of 28 | ||
| 66794 | myo-inositol biosynthesis | 60 | 6 of 10 | ||
| 66794 | phenylacetate degradation (aerobic) | 60 | 3 of 5 | ||
| 66794 | 3-phenylpropionate degradation | 60 | 9 of 15 | ||
| 66794 | starch degradation | 60 | 6 of 10 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | lysine metabolism | 59.52 | 25 of 42 | ||
| 66794 | histidine metabolism | 58.62 | 17 of 29 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | non-pathway related | 55.26 | 21 of 38 | ||
| 66794 | phenol degradation | 55 | 11 of 20 | ||
| 66794 | glycolysis | 52.94 | 9 of 17 | ||
| 66794 | glycogen biosynthesis | 50 | 2 of 4 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | degradation of sugar alcohols | 50 | 8 of 16 | ||
| 66794 | arginine metabolism | 50 | 12 of 24 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | oxidative phosphorylation | 48.35 | 44 of 91 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | urea cycle | 46.15 | 6 of 13 | ||
| 66794 | ascorbate metabolism | 45.45 | 10 of 22 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | glycine betaine biosynthesis | 40 | 2 of 5 | ||
| 66794 | factor 420 biosynthesis | 40 | 2 of 5 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | androgen and estrogen metabolism | 37.5 | 6 of 16 | ||
| 66794 | ketogluconate metabolism | 37.5 | 3 of 8 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 35.29 | 6 of 17 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | 4-hydroxymandelate degradation | 33.33 | 3 of 9 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | polyamine pathway | 30.43 | 7 of 23 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | biotin biosynthesis | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119151 | not determinedn.d. | - | - | - | + | - | + | - | - | - | + | + | +/- | +/- | - | + | - | - | - | - | - | - | - | - | - | + | - | + | + | + | + | + | - | - | - | + | +/- | - | - | + | - | +/- | - | + | + | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM17521v2 assembly for Asticcacaulis excentricus CB 48 | complete | 573065 | 98.81 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Asticcacaulis excentricus 16S rRNA gene, partial sequence | AB016610 | 1426 | 573065 | ||
| 20218 | Asticcacaulis excentricus 16S ribosomal RNA gene, partial sequence | AF115499 | 1282 | 573065 | ||
| 20218 | Asticcacaulis excentricus 16S rRNA gene | AJ007800 | 1416 | 573065 | ||
| 20218 | Asticcacaulis excentricus partial 16S rRNA gene for 16S ribosomal RNA, strain DSM 4724(T) | AJ247194 | 1416 | 573065 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Screening and biodiversity analysis of cultivable inorganic phosphate-solubilizing bacteria in the rhizosphere of Hydrilla verticillata. | Li Y, Liu H, Yu X, Gong S, Gong Z. | PLoS One | 10.1371/journal.pone.0297047 | 2024 | ||
| Metabolism | In silico prospection of microorganisms to produce polyhydroxyalkanoate from whey: Caulobacter segnis DSM 29236 as a suitable industrial strain. | Bustamante D, Segarra S, Tortajada M, Ramon D, Del Cerro C, Auxiliadora Prieto M, Iglesias JR, Rojas A. | Microb Biotechnol | 10.1111/1751-7915.13371 | 2019 | |
| Origin of a Core Bacterial Gene via Co-option and Detoxification of a Phage Lysin. | Randich AM, Kysela DT, Morlot C, Brun YV. | Curr Biol | 10.1016/j.cub.2019.04.032 | 2019 | ||
| Metabolism | Nucleoid Size Scaling and Intracellular Organization of Translation across Bacteria. | Gray WT, Govers SK, Xiang Y, Parry BR, Campos M, Kim S, Jacobs-Wagner C. | Cell | 10.1016/j.cell.2019.05.017 | 2019 | |
| Novel peptidoglycans in Caulobacter and Asticcacaulis spp. | Poindexter JS, Hagenzieker JG. | J Bacteriol | 10.1128/jb.150.1.332-347.1982 | 1982 | ||
| Genetics | Patterns of abundance, chromosomal localization, and domain organization among c-di-GMP-metabolizing genes revealed by comparative genomics of five alphaproteobacterial orders. | Koppenhofer S, Lang AS. | BMC Genomics | 10.1186/s12864-022-09072-9 | 2022 | |
| Phylogeny | Metagenomic analysis of the complex microbial consortium associated with cultures of the oil-rich alga Botryococcus braunii. | Sambles C, Moore K, Lux TM, Jones K, Littlejohn GR, Gouveia JD, Aves SJ, Studholme DJ, Lee R, Love J. | Microbiologyopen | 10.1002/mbo3.482 | 2017 | |
| Membrane Proteins and Proteomics of Cronobacter sakazakii Cells: Reliable Method for Identification and Subcellular Localization. | Novotny J, Svobodova B, Santrucek J, Fukal L, Karamonova L. | Appl Environ Microbiol | 10.1128/aem.02508-21 | 2022 | ||
| In silico characterization of pectate lyase protein sequences from different source organisms. | Dubey AK, Yadav S, Kumar M, Singh VK, Sarangi BK, Yadav D. | Enzyme Res | 10.4061/2010/950230 | 2010 | ||
| Metabolism | CceR and AkgR regulate central carbon and energy metabolism in alphaproteobacteria. | Imam S, Noguera DR, Donohue TJ. | mBio | 10.1128/mbio.02461-14 | 2015 | |
| Degradation of 2,4,6-Trinitrophenol (TNP) by Arthrobacter sp. HPC1223 Isolated from Effluent Treatment Plant. | Qureshi A, Kapley A, Purohit HJ. | Indian J Microbiol | 10.1007/s12088-012-0288-5 | 2012 | ||
| Metabolism | OmpW of Caulobacter crescentus Functions as an Outer Membrane Channel for Cations. | Benz R, Jones MD, Younas F, Maier E, Modi N, Mentele R, Lottspeich F, Kleinekathofer U, Smit J. | PLoS One | 10.1371/journal.pone.0143557 | 2015 | |
| Fetal liver cell transplantation in scid mice. | Sanhadji K, Negrier MS, Touraine JL. | Thymus | 1990 | |||
| Conservation analysis of the CydX protein yields insights into small protein identification and evolution. | Allen RJ, Brenner EP, VanOrsdel CE, Hobson JJ, Hearn DJ, Hemm MR. | BMC Genomics | 10.1186/1471-2164-15-946 | 2014 | ||
| Enzymology | Molecular evolution of urea amidolyase and urea carboxylase in fungi. | Strope PK, Nickerson KW, Harris SD, Moriyama EN. | BMC Evol Biol | 10.1186/1471-2148-11-80 | 2011 | |
| Metabolism | Tick Thioester-Containing Proteins and Phagocytosis Do Not Affect Transmission of Borrelia afzelii from the Competent Vector Ixodes ricinus. | Urbanova V, Hajdusek O, Honig Mondekova H, Sima R, Kopacek P. | Front Cell Infect Microbiol | 10.3389/fcimb.2017.00073 | 2017 | |
| Phylogeny | Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria. | Delamuta JR, Ribeiro RA, Menna P, Bangel EV, Hungria M. | Braz J Microbiol | 10.1590/s1517-83822012000200035 | 2012 | |
| Pathogenicity | Enhancement of biocontrol efficacy of Pichia carribbica to postharvest diseases of strawberries by addition of trehalose to the growth medium. | Zhao L, Zhang H, Li J, Cui J, Zhang X, Ren X. | Int J Mol Sci | 10.3390/ijms13033916 | 2012 | |
| Enzymology | Microcolony cultivation on a soil substrate membrane system selects for previously uncultured soil bacteria. | Ferrari BC, Binnerup SJ, Gillings M. | Appl Environ Microbiol | 10.1128/aem.71.12.8714-8720.2005 | 2005 | |
| Genetics | Comparative analysis of two phenotypically-similar but genomically-distinct Burkholderia cenocepacia-specific bacteriophages. | Lynch KH, Stothard P, Dennis JJ, Dennis JJ. | BMC Genomics | 10.1186/1471-2164-13-223 | 2012 | |
| Metabolism | Nitrite elimination and hydrolytic ring cleavage in 2,4,6-trinitrophenol (picric acid) degradation. | Hofmann KW, Knackmuss HJ, Heiss G. | Appl Environ Microbiol | 10.1128/aem.70.5.2854-2860.2004 | 2004 | |
| Asticcacaulis aquaticus sp. nov., Asticcacaulis currens sp. nov. and Asticcacaulis machinosus sp. nov., isolated from streams in PR China. | Lu H, Chen L, Kong L, Huang L, Chen G. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005974 | 2023 | ||
| Phylogeny | Asticcacaulis tiandongensis sp. nov., a new member of the genus Asticcacaulis, isolated from a cave soil sample. | Zhou XK, Huang Y, Li M, Zhang XF, Wei YQ, Qin SC, Zhang TK, Wang XJ, Liu JJ, Wang L, Liu ZY, Mo MH | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003818 | 2020 | |
| Phylogeny | Asticcacaulis taihuensis sp. nov., a novel stalked bacterium isolated from Taihu Lake, China. | Liu ZP, Wang BJ, Liu SJ, Liu YH | Int J Syst Evol Microbiol | 10.1099/ijs.0.63334-0 | 2005 |
| #1730 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4724 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #39648 | ; Curators of the CIP; |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #119151 | Collection of Institut Pasteur ; Curators of the CIP; CIP 107064 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive2295.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data