Name: Peptoniphilus asaccharolyticus BAI
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17996

Type strain:

Species: Peptoniphilus asaccharolyticus

Strain Designation: BAI, UW 228

Culture col. no.: DSM 20463, ATCC 14963, NCIB 10074, CCUG 9988, JCM 1765, CIP 74.17, KCTC 3321, NCIMB 10074, NCTC 11461, VTT E-981052

Strain history: CIP <- 1974, M. Véron, Necker Hosp., Paris, France <- ATCC <- H.C. Douglas: strain UW 228, Peptococcus aerogenes <- A.R. Prévot: strain BAI, Staphylococcus aerogenes

NCBI tax ID(s): 573058 (strain), 1258 (species)

SI-ID 389401

ATCC 14963, DSM 20463, NCIB 10074, NCTC 11461, CCUG 9988, JCM 8143, NCIMB 10074, CIP 74.17, KCTC 3321, NCTC 13151, VTT E-981052, JCM 1765

Special Collections

Other strains from Peptoniphilus asaccharolyticus

Section

Peptoniphilus asaccharolyticus BAI is an anaerobe, Gram-positive bacterium that was isolated from Human clinical specimen.

Gram-positive
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptoniphilaceae*
	Genus	*Peptoniphilus*
	Species	**Peptoniphilus asaccharolyticus**
	Full Scientific Name (LPSN)	Peptoniphilus asaccharolyticus (Distaso 1912) Ezaki et al. 2001

	Synonym	"Staphylococcus* asaccharolyticus"*
	Synonym	"Schleiferella* asaccharolytica"*
	Synonym	Peptococcus asaccharolyticus
	Synonym	Peptostreptococcus asaccharolyticus

Information on morphological and physiological properties Morphology

[Ref.: #116519]	Gram stain	positive

[Ref.: #116519]	Cell shape	coccus-shaped

[Ref.: #116519]	Motility	no

Multimedia content

[Ref.: #66793]

Caption:

electron microscopic image

[Ref.: #66793]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8834]

Culture medium

CHOPPED MEAT MEDIUM (DSMZ Medium 78)

[Ref.: #8834]

Culture medium growth

[Ref.: #8834]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8834]

Culture medium composition

expand / minimize

[Ref.: #37334]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #37334]

Culture medium growth

[Ref.: #37334]

Culture medium composition

expand / minimize

[Ref.: #8834]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #8834]

Culture medium growth

[Ref.: #8834]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116519]

Culture medium

CIP Medium 20

[Ref.: #116519]

Culture medium growth

[Ref.: #116519]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8834]	growth	37 °C
[Ref.: #37334]	growth	37 °C
[Ref.: #45245]	growth	37 °C
[Ref.: #67770]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8834]	Oxygen tolerance	anaerobe
[Ref.: #45245]	Oxygen tolerance	anaerobe
[Ref.: #116519]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %96.87

[Ref.: #8834]	Murein short key	A21.05
[Ref.: #8834]	Murein types	A4ß L-Orn-D-Glu

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #116519]	nitrate ChEBI	+	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #116519]	nitrite ChEBI	-	reduction
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	+	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #116519]		indole ChEBI	yes
[Ref.: #68380]		indole ChEBI	yes	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	+	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A, API zym
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A, API zym
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A, API zym
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API zym
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A, API zym
[Ref.: #116519]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	+		* from API rID32A
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #116519]	oxidase	-
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	+	4.1.99.1	* from API rID32A
[Ref.: #116519]	urease	-	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #8834]	13346	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+/-	+	-	-	-	-	-	+	-	+	+	-	-
[Ref.: #8834]	12705	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+/-	+	-	-	-	-	-	+/-	-	-	+/-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116519]	13263	-	+	+	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Human clinical specimen
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB640690 (>99% sequence identity) for Peptoniphilus from Microbeatlas

Aquatic Samples	12
Soil Samples	12
Animal Samples	1098
Plant Samples	2
Total Samples	1124

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8834]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #116519]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8834]	Peptoniphilus asaccharolyticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1765	AB640690	1490	GenBank ENA	1258 tax ID
[Ref.: #67770]	Peptoniphilus asaccharolyticus strain CCUG 9988 16S ribosomal RNA gene, partial sequence	AF542228	1396	GenBank ENA	573058 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Peptoniphilus asaccharolyticus DSM 20463	GCA_900176115	contig	GenBank ENA	573058 tax ID
[Ref.: #66792]	Peptoniphilus asaccharolyticus DSM 20463 strain DSM 20463	573058.3	wgs	PATRIC	573058 tax ID	*
[Ref.: #66792]	Peptoniphilus asaccharolyticus strain FDAARGOS_1135	1258.4	wgs	PATRIC	1258 tax ID	*
[Ref.: #66792]	Peptoniphilus asaccharolyticus UW 228, DSM 20463	2503982046	draft	JGI IMG/M	573058 tax ID	*

[Ref.: #8834]	GC-content	32.0 mol%
[Ref.: #67770]	GC-content	32 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Peptoniphilus asaccharolyticus DSM 20463 strain DSM 20463 PATRIC: 573058.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	60	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Peptoniphilus asaccharolyticus DSM 20463 strain DSM 20463 PATRIC: 573058.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	84.583	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	96.87	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	67.085	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.743	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.901	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87.143	no

Availability in culture collections External links

[Ref.: #8834]

Culture collection no.

DSM 20463, ATCC 14963, NCIB 10074, CCUG 9988, JCM 1765, CIP 74.17, KCTC 3321, NCIMB 10074, NCTC 11461, VTT E-981052

[Ref.: #86983]

SI-ID 389401

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Peptoniphilus mikwangii sp. nov., isolated from a clinical specimen of human origin.	Cho E, Park SN, Shin Y, Lim YK, Paek J, Kim HK, Hwang CH, Jo E, Jin D, Chang YH, Kook JK	Curr Microbiol	10.1007/s00284-014-0712-7	2014	*

References

#8834

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20463

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#37334 ; Curators of the CIP;
#45245 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 9988

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86983

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389401.1 )

#116519 Collection of Institut Pasteur ; Curators of the CIP; CIP 74.17
* These data were automatically processed and therefore are not curated

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Peptoniphilus asaccharolyticus DSM 20463 strain DSM 20463

Peptoniphilus asaccharolyticus DSM 20463 strain DSM 20463

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