Zhongshania antarctica (DSM 25701, CCTCC AB 209246, KACC 14066)

Name: Zhongshania antarctica (DSM 25701, CCTCC AB 209246, KACC 14066)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17921

Type strain

Strain Designation ZS5-23

Culture col. no. DSM 25701 CCTCC AB 209246 KACC 14066 ZS5-23

NCBI tax ID(s) 641702

Special Collections DSMZ

History <- KACC <- Y.-Z. Zhang et al., State Key Lab. Microbial Technology, Marine Biotechnology Research Center, Shandong University, China

Links

Zhongshania antarctica ZS5-23 is a bacterium that was isolated from coastal fast ice.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 402187

DSM 25701

@ref 20215

Last LPSN update 2026-02-09 11:22:20

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Cellvibrionales

Family Spongiibacteraceae

Genus Zhongshania

Species Zhongshania antarctica

Full scientific name Zhongshania antarctica Li et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.5
125439	negative	99.9

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18092	REACTIVATION WITH LIQUID MEDIUM 514 (DSMZ Medium 514c)		Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 514 (DSMZ Medium 514c) Composition: NaCl 19.45 g/l Agar 18.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l Na2CO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18092	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	93.9

Spore formation

@ref	Spore formation	Confidence
125439		99.9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Ice

Isolation

@ref	Sample type	Continent
18092	coastal fast ice	Australia and Oceania

Taxonmaps

69479

Global distribution of 16S sequence FJ889619 (>99% sequence identity) for Zhongshania from Microbeatlas

Aquatic Samples	3986
Soil Samples	107
Animal Samples	283
Plant Samples	21
Total Samples	4397

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18092	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1420294v1 assembly for Zhongshania antarctica DSM 25701	contig	GCA_014202945	641702.4	2861647389	641702	74.25
66792	Zant_v1 assembly for Zhongshania antarctica ZS5-23	contig	GCA_014898265	641702.5	8048283935	641702	68

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18092	Zhongshania antarctica strain ZS5-23 16S ribosomal RNA gene, partial sequence	FJ889619	1501		641702

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Zhongshania antarctica DSM 25701
NCBI: GCA_014202945

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.90	no
125439	motility	BacteriaNetⓘ	yes	87.80	no
125439	gram_stain	BacteriaNetⓘ	negative	99.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Zhongshania antarctica strain DSM 25701
PATRIC: 641702.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.50	no
125438	anaerobic	anaerobicⓘ	no	93.69	no
125438	spore-forming	spore-formingⓘ	no	86.29	no
125438	aerobic	aerobicⓘ	yes	82.04	no
125438	thermophilic	thermophileⓘ	no	97.40	yes
125438	flagellated	motile2+ⓘ	yes	67.85	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Polyphasic and phylogenomic reevaluation of Zhongshania and Marortus with the description of Zhongshania aquatica sp. nov.	Lee JY, Li Z, Guan Y, Lee MK.	Sci Rep	10.1038/s41598-025-08302-w	2025
Phylogeny	Zhongshania aliphaticivorans sp. nov., an aliphatic hydrocarbon-degrading bacterium isolated from marine sediment, and transfer of Spongiibacter borealis Jang et al. 2011 to the genus Zhongshania as Zhongshania borealis comb. nov.	Lo N, Kang HJ, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.068593-0	2014
Phylogeny	Zhongshania antarctica gen. nov., sp. nov. and Zhongshania guokunii sp. nov., gammaproteobacteria respectively isolated from coastal attached (fast) ice and surface seawater of the Antarctic.	Li HJ, Zhang XY, Chen CX, Zhang YJ, Gao ZM, Yu Y, Chen XL, Chen B, Zhang YZ	Int J Syst Evol Microbiol	10.1099/ijs.0.026153-0	2010

References

#18092	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25701
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Zhongshania antarctica (DSM 25701, CCTCC AB 209246, KACC 14066)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014202945

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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