Jiangella alba (DSM 45237, CCTCC AA 208023, JCM 16901)

Name: Jiangella alba (DSM 45237, CCTCC AA 208023, JCM 16901)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17823

Type strain

Culture col. no. DSM 45237 CCTCC AA 208023 JCM 16901 YIM 61503

NCBI tax ID(s) 561176

Special Collections DSMZ JCM Wink compendium Literature strains

History DSMZ <- S.-K. Tang, YIM; YIM 61503 <- S. Qin and et al. JCM <-- DSM 45237 <-- S.-K. Tang <-- S. Qin et al. YIM 61503.

Links

Jiangella alba DSM 45237 is an aerobe, Gram-positive bacterium that builds an aerial mycelium and was isolated from surface-sterilized healthy stem of the medicinal plant Maytenus austroyunnanensis.

Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 402843

JCM 16901,DSM 45237

@ref 20215

Last LPSN update 2026-05-29 08:29:06

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Jiangellales

Family Jiangellaceae

Genus Jiangella

Species Jiangella alba

Full scientific name Jiangella alba Qin et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Confidence
29229	positive
125438	positive	92.116
125439	positive	98.424

Colony morphology

@ref	Colony color	Incubation period	Medium used
20186	Beige (1001)	10-14 days	ISP 2
20186	Grey white (9002)	10-14 days	ISP 3
20186	Signal white (9003)	10-14 days	ISP 4
20186	Beige (1001)	10-14 days	ISP 6
20186	Beige (1001)	10-14 days	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
20186			ISP 2
20186	Aerial Mycelium	Grey white	ISP 3
20186			ISP 4
20186	Aerial Mycelium	Light ivory	ISP 6
20186			ISP 7

Multimedia

@ref:	15906
multimedia content:	DSM_45237.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45237.jpg
caption:	Medium 215 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
15906	BHI MEDIUM (DSMZ Medium 215)	Medium recipe at MediaDive	Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water
20186	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
20186	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
20186	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
20186	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
20186	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
15906	ISP2 MEDIUM (DSMZ Medium 987)	Medium recipe at MediaDive	Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water
15906	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
15906	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
15906	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
15906	positive	growth	28
20186	positive	optimum	28
29229	positive	growth	15-45
29229	positive	optimum	28
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
29229	positive	optimum	7
29229	positive	growth	6.5-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
29229	aerobe
125439	obligate aerobe	99.837

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29229	NaCl	positive	growth	0-10 %
29229	NaCl	positive	optimum	5 %

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
20186	22599 ChEBI	arabinose	+
29229	22599 ChEBI	arabinose	+	carbon source
20186	62968 ChEBI	cellulose	+
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
20186	28757 ChEBI	fructose	-
29229	28757 ChEBI	fructose	+	carbon source
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
20186	17234 ChEBI	glucose	+
29229	17234 ChEBI	glucose	+	carbon source
29229	17754 ChEBI	glycerol	+	carbon source
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
29229	17306 ChEBI	maltose	+	carbon source
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
20186	29864 ChEBI	mannitol	-
29229	29864 ChEBI	mannitol	+	carbon source
29229	37684 ChEBI	mannose	+	carbon source
20186	17268 ChEBI	myo-inositol	-
29229	17632 ChEBI	nitrate	+	reduction
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
20186	16634 ChEBI	raffinose	+
29229	16634 ChEBI	raffinose	+	carbon source
20186	26546 ChEBI	rhamnose	+
29229	26546 ChEBI	rhamnose	+	carbon source
29229	33942 ChEBI	ribose	+	carbon source
29229	17814 ChEBI	salicin	+	carbon source
20186	17992 ChEBI	sucrose	+
29229	17992 ChEBI	sucrose	+	carbon source
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
29229	27082 ChEBI	trehalose	+	carbon source
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
20186	18222 ChEBI	xylose	+
29229	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
29229	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	+		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
20186	-	-	+	+	-	+	+	-	-	-	+	not determinedn.d.	+/-	-	-	-	-	-	+	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
20186	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Stem (Branch)
#Host Body-Site	#Plant	#Sterilized plant part

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
15906	surface-sterilized healthy stem of the medicinal plant Maytenus austroyunnanensis	Maytenus austroyunnanensis	Yunnan province, Xishuangbanna, tropical rainforest	China	CHN	Asia
67770	Surface-sterilized stems of Maytenus austroyunnanensis from a tropical rainforest	Maytenus austroyunnanensis	Xishuangbanna, Yunnan Province, south-west China	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence FJ157186 (>99% sequence identity) for Jiangella from Microbeatlas

Aquatic Samples	23
Soil Samples	468
Animal Samples	40
Plant Samples	11
Total Samples	542

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15906	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2630968302 annotated assembly for Jiangella alba DSM 45237	contig	GCA_900106035	561176.5	2630968302	561176	77.07
67770	ASM170812v1 assembly for Jiangella alba YIM 61503	scaffold	GCA_001708125	561176.4	2839637960	561176	60.83

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15906	Jiangella alba strain YIM 61503 16S ribosomal RNA gene, partial sequence	FJ157186	1519		561176

GC content

@ref	GC-content (mol%)	Method
15906	71.9	high performance liquid chromatography (HPLC)
29229	71.9
67770	72.84	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2630968302 annotated assembly for Jiangella alba DSM 45237
BV-BRC: 561176.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.84	no
125439	gram_stain	BacteriaNetⓘ	positive	98.42	no
125439	spore_formation	BacteriaNetⓘ	yes	40.93	no
125439	motility	BacteriaNetⓘ	no	81.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Jiangella alba strain DSM 45237
PATRIC: 561176.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.12	yes
125438	anaerobic	anaerobicⓘ	no	95.00	no
125438	spore-forming	spore-formingⓘ	yes	70.24	no
125438	aerobic	aerobicⓘ	yes	88.14	yes
125438	thermophilic	thermophileⓘ	no	98.00	no
125438	flagellated	motile2+ⓘ	no	86.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Jiangella gansuensis strain YIM 002^T (DSM 44835^T), the type species of the genus Jiangella and source of new antibiotic compounds.	Jiao JY, Carro L, Liu L, Gao XY, Zhang XT, Hozzein WN, Lapidus A, Huntemann M, Reddy TBK, Varghese N, Hadjithomas M, Ivanova NN, Goker M, Pillay M, Eisen JA, Woyke T, Klenk HP, Kyrpides NC, Li WJ.	Stand Genomic Sci	10.1186/s40793-017-0226-6	2017
Phylogeny	Genome sequence and comparative analysis of Jiangella alba YIM 61503(T) isolated from a medicinal plant Maytenus austroyunnanensis.	Jiao JY, Salam N, Liu L, Rao MPN, Zhang XT, Fang BZ, Han MX, Zhang ZT, Chen J, Zhao J, Zhou Y, Alkhalifah DHM, Liu Q, Xiao M, Klenk HP, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-017-1010-8	2017
Phylogeny	Haloactinopolyspora alba gen. nov., sp. nov., a halophilic filamentous actinomycete isolated from a salt lake, with proposal of Jiangellaceae fam. nov. and Jiangellineae subord. nov.	Tang SK, Zhi XY, Wang Y, Shi R, Lou K, Xu LH, Li WJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.021725-0	2011
Phylogeny	Genome-based classification of three novel actinobacteria from the Karakum Desert: Jiangella asiatica sp. nov., Jiangella aurantiaca sp. nov. and Jiangella ureilytica sp. nov.	Saygin H, Ay H, Guven K, Sahin N	Int J Syst Evol Microbiol	10.1099/ijsem.0.004011	2020
Phylogeny	Jiangella anatolica sp. nov. isolated from coastal lake soil.	Ay H, Nouioui I, Carro L, Klenk HP, Cetin D, Igual JM, Sahin N, Isik K	Antonie Van Leeuwenhoek	10.1007/s10482-018-01222-y	2019
Phylogeny	Jiangella mangrovi sp. nov., isolated from mangrove soil.	Suksaard P, Duangmal K, Srivibool R, Xie Q, Hong K, Pathom-Aree W	Int J Syst Evol Microbiol	10.1099/ijs.0.000303	2015
Phylogeny	Jiangella muralis sp. nov., from an indoor environment.	Kampfer P, Schafer J, Lodders N, Martin K	Int J Syst Evol Microbiol	10.1099/ijs.0.022277-0	2010
Phylogeny	Jiangella alba sp. nov., an endophytic actinomycete isolated from the stem of Maytenus austroyunnanensis.	Qin S, Zhao GZ, Li J, Zhu WY, Xu LH, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.009001-0	2009

References

#15906	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45237
#20186	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25650	IJSEM 2162 2009 ( DOI 10.1099/ijs.0.009001-0 , PubMed 19605701 )
#29229	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25650
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Jiangella alba (DSM 45237, CCTCC AA 208023, JCM 16901)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900106035

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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