Name: Echinicola vietnamensis DSM 17526
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17718

Type strain:

Species: Echinicola vietnamensis

Culture col. no.: DSM 17526, CIP 109902, LMG 23754, KMM 6221

Strain history: CIP <- 2008, DSMZ <- O.I. Nedashkovskaya, RAS, Vladivostok, Russia: strain KMM 6221 <- I.A. Beleneva, RAS, Vladivostok, Russia

NCBI tax ID(s): 926556 (strain), 390884 (species)

SI-ID 292039

LMG 23754, DSM 17526, KCTC 12713, CIP 109902

Section

Echinicola vietnamensis DSM 17526 is an obligate aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from seawater collected in a musselfarm.

colony-forming
Gram-negative
motile
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Echinicola*
	Species	**Echinicola vietnamensis**
	Full Scientific Name (LPSN)	Echinicola vietnamensis Nedashkovskaya et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #31859]	Gram stain	negative
[Ref.: #28122]	Gram stain	negative
[Ref.: #123838]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.994

[Ref.: #31859]	Cell length	1.1-2.3 µm
[Ref.: #28122]	Cell length	1.1-2.3 µm

[Ref.: #31859]	Cell width	0.4-0.5 µm
[Ref.: #28122]	Cell width	0.4-0.5 µm

[Ref.: #31859]	Motility	yes
[Ref.: #28122]	Motility	yes
[Ref.: #123838]	Motility	no

[Ref.: #31859]	Flagellum arrangement	gliding
[Ref.: #28122]	Flagellum arrangement	gliding

[Ref.: #28122]	Cell shape	rod-shaped
[Ref.: #123838]	Cell shape	rod-shaped

[Ref.: #28122]	Colony size	2-3 mm
[Ref.: #28122]	Colony color	light pink
[Ref.: #28122]	Colony shape	circular
[Ref.: #28122]	Cultivation medium used	marine agar (Difco)

[Ref.: #31859]	Pigment production	yes
[Ref.: #28122]	Pigment production	no
[Ref.: #28122]	Pigment name	Flexirubin-Type

Multimedia content

[Ref.: #66793]

Caption:

electron microscopic image

[Ref.: #66793]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7042]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #7042]

Culture medium growth

[Ref.: #7042]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7042]

Culture medium composition

expand / minimize

[Ref.: #34512]

Culture medium

Marine agar (MA)

[Ref.: #34512]

Culture medium growth

[Ref.: #34512]

Culture medium composition

expand / minimize

[Ref.: #28122]

Culture medium

marine agar (Difco)

[Ref.: #28122]

Culture medium growth

[Ref.: #123838]

Culture medium

CIP Medium 13

[Ref.: #123838]

Culture medium growth

[Ref.: #123838]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #7042]	growth	28 °C
[Ref.: #28122]	optimum	30-32 °C
[Ref.: #28122]	growth	6-44 °C
[Ref.: #31859]	growth	06-44 °C
[Ref.: #31859]	optimum	31-32 °C
[Ref.: #34512]	growth	30 °C

[Ref.: #7042]	Temperature range	mesophilic
[Ref.: #28122]	Temperature range	mesophilic
[Ref.: #31859]	Temperature range	mesophilic
[Ref.: #34512]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123838]

Oxygen tolerance

obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.92

	Salt		Salt conc.
[Ref.: #31859]	NaCl	growth	0-15	%
[Ref.: #31859]	NaCl	optimum	7.5	%
[Ref.: #28122]	NaCl	growth	0-15	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28122]	agar ChEBI	-	degradation
[Ref.: #28122]	carboxymethylcellulose ChEBI	-	degradation
[Ref.: #28122]	casein	-	degradation
[Ref.: #28122]	cellobiose ChEBI	-	builds acid from
[Ref.: #28122]	cellulose ChEBI	-	degradation
[Ref.: #28122]	chitin ChEBI	-	degradation
[Ref.: #28122]	D-fructose ChEBI	-	builds acid from
[Ref.: #28122]	D-galactose ChEBI	-	builds acid from
[Ref.: #28122]	D-glucose ChEBI	-	builds acid from
[Ref.: #28122]	D-glucose ChEBI	-	fermentation
[Ref.: #28122]	galactitol ChEBI	-	builds acid from
[Ref.: #28122]	gelatin ChEBI	-	degradation
[Ref.: #28122]	glycerol ChEBI	-	builds acid from
[Ref.: #28122]	L-arabinose ChEBI	-	builds acid from
[Ref.: #28122]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #28122]	L-sorbose ChEBI	-	builds acid from
[Ref.: #28122]	lactose ChEBI	-	builds acid from
[Ref.: #28122]	maltose ChEBI	-	builds acid from
[Ref.: #28122]	mannitol ChEBI	-	builds acid from
[Ref.: #28122]	melibiose ChEBI	-	builds acid from
[Ref.: #28122]	myo-inositol ChEBI	-	builds acid from
[Ref.: #28122]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #28122]	nitrate ChEBI	-	reduction
[Ref.: #123838]	nitrate ChEBI	-	reduction
[Ref.: #123838]	nitrite ChEBI	-	reduction
[Ref.: #28122]	raffinose ChEBI	-	builds acid from
[Ref.: #28122]	ribitol ChEBI	-	builds acid from
[Ref.: #28122]	starch ChEBI	+	degradation
[Ref.: #28122]	sucrose ChEBI	-	builds acid from
[Ref.: #28122]	tween 20 ChEBI	-	degradation
[Ref.: #28122]	tween 40 ChEBI	-	degradation
[Ref.: #28122]	tween 80 ChEBI	-	degradation
[Ref.: #28122]	urea ChEBI	-	degradation
[Ref.: #28122]	xylose ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #28122]	hydrogen sulfide ChEBI	no
[Ref.: #28122]	indole ChEBI	no
[Ref.: #123838]	indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #31859]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #31859]	catalase	+	1.11.1.6
[Ref.: #123838]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #31859]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123838]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #123838]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123838]	12207	-	+	+	+	-	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	molybdenum cofactor biosynthesis	100	9 of 9
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	tetrahydrofolate metabolism	100	14 of 14
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	photosynthesis	92.86	13 of 14
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	NAD metabolism	88.89	16 of 18
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	lipid metabolism	83.87	26 of 31
[Ref.: #66794]	vitamin K metabolism	80	4 of 5
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	starch degradation	80	8 of 10
[Ref.: #66794]	alanine metabolism	79.31	23 of 29
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	purine metabolism	77.66	73 of 94
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	glutamate and glutamine metabolism	75	21 of 28
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	cysteine metabolism	72.22	13 of 18
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	71.43	5 of 7
[Ref.: #66794]	tyrosine metabolism	71.43	10 of 14
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	degradation of pentoses	71.43	20 of 28
[Ref.: #66794]	pyrimidine metabolism	71.11	32 of 45
[Ref.: #66794]	tryptophan metabolism	71.05	27 of 38
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	isoprenoid biosynthesis	69.23	18 of 26
[Ref.: #66794]	histidine metabolism	68.97	20 of 29
[Ref.: #66794]	lysine metabolism	66.67	28 of 42
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	formaldehyde oxidation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	methionine metabolism	65.38	17 of 26
[Ref.: #66794]	citric acid cycle	64.29	9 of 14
[Ref.: #66794]	degradation of sugar acids	64	16 of 25
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	non-pathway related	63.16	24 of 38
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	arginine metabolism	62.5	15 of 24
[Ref.: #66794]	urea cycle	61.54	8 of 13
[Ref.: #66794]	degradation of hexoses	61.11	11 of 18
[Ref.: #66794]	metabolism of amino sugars and derivatives	60	3 of 5
[Ref.: #66794]	arachidonate biosynthesis	60	3 of 5
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	oxidative phosphorylation	51.65	47 of 91
[Ref.: #66794]	catecholamine biosynthesis	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	alginate biosynthesis	50	2 of 4
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	ascorbate metabolism	50	11 of 22
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	4-hydroxymandelate degradation	44.44	4 of 9
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	cardiolipin biosynthesis	42.86	3 of 7
[Ref.: #66794]	creatinine degradation	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	gallate degradation	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	myo-inositol biosynthesis	40	4 of 10
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	phenol degradation	35	7 of 20
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	vitamin B12 metabolism	32.35	11 of 34
[Ref.: #66794]	androgen and estrogen metabolism	31.25	5 of 16
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	carotenoid biosynthesis	27.27	6 of 22
[Ref.: #66794]	3-phenylpropionate degradation	26.67	4 of 15
[Ref.: #66794]	polyamine pathway	26.09	6 of 23
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	23.53	4 of 17
[Ref.: #66794]	allantoin degradation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7042]	Sample type/isolated from	seawater collected in a musselfarm
[Ref.: #7042]	Geographic location (country and/or sea, region)	South China Sea, Nha Trang Bay
[Ref.: #7042]	Country	Vietnam
[Ref.: #7042]	Country ISO 3 Code	VNM
[Ref.: #7042]	Continent	Asia

[Ref.: #28122]	Sample type/isolated from	seawater from a mussel farm located in Nha Trang Bay
[Ref.: #28122]	Geographic location (country and/or sea, region)	South China Sea
[Ref.: #28122]	Country	Vietnam
[Ref.: #28122]	Country ISO 3 Code	VNM
[Ref.: #28122]	Continent	Asia

[Ref.: #123838]	Sample type/isolated from	Environment, Seawater, musselfarm
[Ref.: #123838]	Geographic location (country and/or sea, region)	Nha Trang bay
[Ref.: #123838]	Country	Vietnam
[Ref.: #123838]	Country ISO 3 Code	VNM
[Ref.: #123838]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Aquaculture
#Host	#Invertebrates (Other)	#Mollusca
#Environmental	#Aquatic	#Marine
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM406795 (>99% sequence identity) for Echinicola vietnamensis subclade from Microbeatlas

Aquatic Samples	532
Soil Samples	295
Animal Samples	1139
Plant Samples	11
Total Samples	1977

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7042]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123838]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7042]	Echinicola vietnamensis 16S rRNA gene, type strain LMG 23754T	AM406795	1437	ENA	390884 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Echinicola vietnamensis DSM 17526	GCA_000325705	complete	GenBank	926556 tax ID	*
[Ref.: #66792]	Echinicola vietnamensis DSM 17526	926556.3	complete	PATRIC	926556 tax ID	*
[Ref.: #66792]	Echinicola vietnamensis KMM 6221, DSM 17526	2509276020	complete	JGI IMG/M	390884 tax ID	*

[Ref.: #7042]	GC-content	45.9 mol%
[Ref.: #7042]	GC-content	44.8 mol%	sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Echinicola vietnamensis DSM 17526 DSM 17526 NCBI: GCA_000325705.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Echinicola vietnamensis DSM 17526 DSM 17526 NCBI: GCA_000325705.1
[Ref.: #69480]	motile	no	89.568	no
[Ref.: #69480]	flagellated	no	96.954	no
[Ref.: #69480]	gram-positive	no	97.558	yes
[Ref.: #69480]	anaerobic	no	98.986	no
[Ref.: #69480]	aerobic	yes	87.695	no
[Ref.: #69480]	halophile	no	69.148	yes
[Ref.: #69480]	spore-forming	no	96.362	no
[Ref.: #69480]	thermophile	no	98.809	yes
[Ref.: #69480]	glucose-util	yes	88.439	no
[Ref.: #69480]	glucose-ferment	no	88.826	yes

Availability in culture collections External links

[Ref.: #7042]

Culture collection no.

DSM 17526, CIP 109902, LMG 23754, KMM 6221

[Ref.: #86709]

SI-ID 292039

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Echinicola sediminis sp. nov., a marine bacterium isolated from coastal sediment.	Lee DW, Lee AH, Lee H, Kim JJ, Khim JS, Yim UH, Kim BS	Int J Syst Evol Microbiol	10.1099/ijsem.0.002118	2017	*
Phylogeny	Echinicola rosea sp. nov., a marine bacterium isolated from surface seawater.	Liang P, Sun J, Li H, Liu M, Xue Z, Zhang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.001191	2016	*
Phylogeny	Echinicola jeungdonensis sp. nov., isolated from a solar saltern.	Kim H, Joung Y, Ahn TS, Joh K	Int J Syst Evol Microbiol	10.1099/ijs.0.026765-0	2010	*
Phylogeny	Echinicola vietnamensis sp. nov., a member of the phylum Bacteroidetes isolated from seawater.	Nedashkovskaya OI, Kim SB, Hoste B, Shin DS, Beleneva IA, Vancanneyt M, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/ijs.0.64546-0	2007	*
	The Unusual Lipid A Structure and Immunoinhibitory Activity of LPS from Marine Bacteria Echinicola pacifica KMM 6172(T) and Echinicola vietnamensis KMM 6221(T).	Pither MD, Mantova G, Scaglione E, Pagliuca C, Colicchio R, Vitiello M, Chernikov OV, Hua KF, Kokoulin MS, Silipo A, Salvatore P, Molinaro A, Di Lorenzo F	Microorganisms	10.3390/microorganisms9122552	2021	*

References

#7042

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17526

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28122

IJSEM 761 2007 ( DOI 10.1099/ijs.0.64546-0 , PubMed 17392202 )

#31859

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28122 (see below)

#34512 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86709

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID292039.1 )

#123838 Collection of Institut Pasteur ; Curators of the CIP; CIP 109902

#28122

IJSEM 761 2007 ( DOI 10.1099/ijs.0.64546-0 , PubMed 17392202 )

* These data were automatically processed and therefore are not curated

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Echinicola vietnamensis DSM 17526 DSM 17526

Echinicola vietnamensis DSM 17526 DSM 17526

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