Name: Echinicola pacifica DSM 19836
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17719

Type strain:

Species: Echinicola pacifica

Culture col. no.: DSM 19836, KCTC 12368, KMM 6172, LMG 23350

Strain history: <- O. I. Nedashkovskaya, Pacific Inst. Bioorg. Chem., RAS, Vladivostok; KMM 6172

NCBI tax ID(s): 1121859 (strain), 346377 (species)

SI-ID 138410

LMG 23028, KCTC 12368, LMG 23350, DSM 19836

Section

Echinicola pacifica DSM 19836 is a facultative anaerobe, chemoorganotroph, mesophilic bacterium that forms circular colonies and was isolated from sea urchin Strongylocentrotus intermedius.

colony-forming
Gram-negative
motile
rod-shaped
chemoorganotroph
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Echinicola*
	Species	**Echinicola pacifica**
	Full Scientific Name (LPSN)	Echinicola pacifica Nedashkovskaya et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #31738]	Gram stain	negative
[Ref.: #28014]	Gram stain	negative

[Ref.: #31738]	Cell length	1.2-1.9 µm
[Ref.: #28014]	Cell length	0.8-2.3 µm

[Ref.: #31738]	Cell width	0.3-0.4 µm
[Ref.: #28014]	Cell width	0.4-0.6 µm

[Ref.: #31738]	Cell shape	rod-shaped
[Ref.: #28014]	Cell shape	rod-shaped

[Ref.: #31738]	Motility	yes
[Ref.: #28014]	Motility	yes

[Ref.: #31738]	Flagellum arrangement	gliding
[Ref.: #28014]	Flagellum arrangement	gliding

[Ref.: #28014]	Colony size	2-3 mm
[Ref.: #28014]	Colony color	pink
[Ref.: #28014]	Colony shape	circular
[Ref.: #28014]	Cultivation medium used	marine agar

[Ref.: #31738]	Pigment production	yes
[Ref.: #28014]	Pigment production	no
[Ref.: #28014]	Pigment name	Flexirubin type

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8343]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #8343]

Culture medium growth

[Ref.: #8343]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8343]

Culture medium composition

expand / minimize

[Ref.: #28014]

Culture medium

Marine agar (MA)

[Ref.: #28014]

Culture medium growth

		Temperature
[Ref.: #8343]	growth	28 °C
[Ref.: #28014]	growth	42 °C
[Ref.: #28014]	optimum	25-28 °C
[Ref.: #28014]	growth	6-41 °C
[Ref.: #31738]	growth	06-41 °C
[Ref.: #31738]	optimum	25-28 °C

[Ref.: #8343]	Temperature range	mesophilic
[Ref.: #28014]	Temperature range	thermophilic
[Ref.: #28014]	Temperature range	mesophilic
[Ref.: #31738]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31738]			optimum	7
[Ref.: #31738]			growth	7

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31738]

Oxygen tolerance

facultative anaerobe

[Ref.: #28014]

Nutrition type

chemoorganotroph

[Ref.: #28014]	Type of spore	endospore
[Ref.: #28014]	Ability of spore formation	no
[Ref.: #31738]	Ability of spore formation	no

	Salt		Salt conc.
[Ref.: #31738]	NaCl	growth	0-12	%
[Ref.: #31738]	NaCl	optimum	0-12	%
[Ref.: #28014]	NaCl	growth	0-12	%

[Ref.: #31738]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28014]	2,3-butanediol ChEBI	-	respiration
[Ref.: #28014]	2-hydroxybutyrate ChEBI	-	respiration
[Ref.: #28014]	2-hydroxybutyrate ChEBI	+	respiration
[Ref.: #28014]	2-oxoglutarate ChEBI	-	respiration
[Ref.: #28014]	2-oxopentanoate ChEBI	-	respiration
[Ref.: #28014]	3-hydroxybutyrate ChEBI	-	respiration
[Ref.: #28014]	4-hydroxybutyrate ChEBI	-	respiration
[Ref.: #28014]	4-hydroxyphenylacetic acid ChEBI	-	respiration
[Ref.: #28014]	acetate ChEBI	-	respiration
[Ref.: #28014]	agar ChEBI	+	hydrolysis
[Ref.: #28014]	agar ChEBI	+/-	degradation
[Ref.: #31738]	alanine ChEBI	+	carbon source
[Ref.: #31738]	alpha-cyclodextrin ChEBI	+	carbon source
[Ref.: #28014]	alpha-cyclodextrin ChEBI	+	respiration
[Ref.: #28014]	alpha-D-glucose ChEBI	+	respiration
[Ref.: #28014]	alpha-lactose ChEBI	+	respiration
[Ref.: #28014]	amygdalin ChEBI	+	builds acid from
[Ref.: #31738]	asparagine ChEBI	+	carbon source
[Ref.: #31738]	aspartate ChEBI	+	carbon source
[Ref.: #28014]	bromosuccinate ChEBI	-	respiration
[Ref.: #28014]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #28014]	casein	-	hydrolysis
[Ref.: #28014]	cellobiose ChEBI	+	builds acid from
[Ref.: #28014]	cellulose ChEBI	-	hydrolysis
[Ref.: #28014]	chitin ChEBI	-	hydrolysis
[Ref.: #28014]	cis-aconitate ChEBI	-	respiration
[Ref.: #31738]	citrate ChEBI	+	carbon source
[Ref.: #28014]	citrate ChEBI	-	respiration
[Ref.: #28014]	citrate ChEBI	+	assimilation
[Ref.: #28014]	D-alanine ChEBI	-	respiration
[Ref.: #28014]	D-fructose ChEBI	+	respiration
[Ref.: #28014]	D-galactonate ChEBI	-	respiration
[Ref.: #28014]	D-galactose ChEBI	+	oxidation
[Ref.: #28014]	D-galactose ChEBI	+	respiration
[Ref.: #28014]	D-galacturonic acid ChEBI	+	respiration
[Ref.: #28014]	D-gluconate ChEBI	-	respiration
[Ref.: #28014]	D-glucosaminic acid ChEBI	-	respiration
[Ref.: #28014]	D-glucose ChEBI	+	builds acid from
[Ref.: #28014]	D-glucose ChEBI	+	fermentation
[Ref.: #28014]	D-glucose 6-phosphate ChEBI	-	respiration
[Ref.: #28014]	D-glucuronate ChEBI	+	respiration
[Ref.: #28014]	D-mannitol ChEBI	-	respiration
[Ref.: #28014]	D-mannose ChEBI	+	builds acid from
[Ref.: #28014]	D-mannose ChEBI	+	respiration
[Ref.: #28014]	D-saccharate ChEBI	-	respiration
[Ref.: #28014]	D-serine ChEBI	-	respiration
[Ref.: #28014]	D-sorbitol ChEBI	-	respiration
[Ref.: #28014]	D-trehalose ChEBI	+	respiration
[Ref.: #28014]	D-xylose ChEBI	+	builds acid from
[Ref.: #31738]	dextrin ChEBI	+	carbon source
[Ref.: #28014]	dextrin ChEBI	+	respiration
[Ref.: #28014]	DL-carnitine ChEBI	-	respiration
[Ref.: #28014]	dna ChEBI	-	hydrolysis
[Ref.: #28014]	erythritol ChEBI	-	respiration
[Ref.: #31738]	esculin ChEBI	+	hydrolysis
[Ref.: #28014]	esculin ChEBI	+	degradation
[Ref.: #28014]	ethanolamine ChEBI	-	respiration
[Ref.: #28014]	formate ChEBI	-	respiration
[Ref.: #31738]	fructose ChEBI	+	carbon source
[Ref.: #31738]	fucose ChEBI	+	carbon source
[Ref.: #28014]	fucose ChEBI	-	builds acid from
[Ref.: #28014]	galactitol ChEBI	-	builds acid from
[Ref.: #31738]	galacturonate ChEBI	+	carbon source
[Ref.: #28014]	gamma-aminobutyric acid ChEBI	-	respiration
[Ref.: #28014]	gelatin ChEBI	+	hydrolysis
[Ref.: #28014]	gelatin ChEBI	+/-	degradation
[Ref.: #28014]	gentiobiose ChEBI	+	respiration
[Ref.: #31738]	glucose ChEBI	+	carbon source
[Ref.: #28014]	glucose 1-phosphate ChEBI	-	respiration
[Ref.: #31738]	glucuronamide ChEBI	+	carbon source
[Ref.: #28014]	glucuronamide ChEBI	-	respiration
[Ref.: #31738]	glutamate ChEBI	+	carbon source
[Ref.: #28014]	glycerol ChEBI	-	builds acid from
[Ref.: #28014]	glycerol ChEBI	-	respiration
[Ref.: #28014]	glycerol 1-phosphate ChEBI	-	respiration
[Ref.: #31738]	glycogen ChEBI	+	carbon source
[Ref.: #28014]	glycogen ChEBI	+	respiration
[Ref.: #28014]	glycyl L-aspartic acid ChEBI	-	respiration
[Ref.: #28014]	glycyl-l-glutamate ChEBI	-	respiration
[Ref.: #28014]	hydroxyproline ChEBI	+	respiration
[Ref.: #28014]	inosine ChEBI	-	respiration
[Ref.: #28014]	itaconate ChEBI	-	respiration
[Ref.: #28014]	L-alaninamide ChEBI	+	respiration
[Ref.: #28014]	L-alanine ChEBI	+	respiration
[Ref.: #28014]	L-alanylglycine ChEBI	+	respiration
[Ref.: #28014]	L-arabinose ChEBI	+	builds acid from
[Ref.: #28014]	L-arabitol ChEBI	-	respiration
[Ref.: #28014]	L-asparagine ChEBI	+	respiration
[Ref.: #28014]	L-aspartate ChEBI	+	respiration
[Ref.: #28014]	L-fucose ChEBI	+	respiration
[Ref.: #28014]	L-glutamate ChEBI	+	respiration
[Ref.: #28014]	L-histidine ChEBI	-	respiration
[Ref.: #28014]	L-leucine ChEBI	-	respiration
[Ref.: #28014]	L-ornithine ChEBI	-	respiration
[Ref.: #28014]	L-phenylalanine ChEBI	-	respiration
[Ref.: #28014]	L-proline ChEBI	-	respiration
[Ref.: #28014]	L-pyroglutamic acid ChEBI	-	respiration
[Ref.: #28014]	L-rhamnose ChEBI	+	builds acid from
[Ref.: #28014]	L-serine ChEBI	-	respiration
[Ref.: #28014]	L-threonine ChEBI	+	respiration
[Ref.: #28014]	L-xylose ChEBI	+	builds acid from
[Ref.: #28014]	lactate ChEBI	-	respiration
[Ref.: #31738]	lactose ChEBI	+	carbon source
[Ref.: #28014]	lactose ChEBI	+	builds acid from
[Ref.: #28014]	lactulose ChEBI	+	respiration
[Ref.: #28014]	malonate ChEBI	-	respiration
[Ref.: #28014]	maltose ChEBI	+	builds acid from
[Ref.: #28014]	mannitol ChEBI	-	builds acid from
[Ref.: #31738]	mannose ChEBI	+	carbon source
[Ref.: #31738]	melibiose ChEBI	+	carbon source
[Ref.: #28014]	melibiose ChEBI	+	respiration
[Ref.: #28014]	melibiose ChEBI	-	builds acid from
[Ref.: #28014]	methyl D-glucoside ChEBI	+	respiration
[Ref.: #28014]	methyl pyruvate ChEBI	-	respiration
[Ref.: #28014]	monomethyl succinate ChEBI	-	respiration
[Ref.: #28014]	myo-inositol ChEBI	-	builds acid from
[Ref.: #28014]	myo-inositol ChEBI	-	respiration
[Ref.: #28014]	N-acetylgalactosamine ChEBI	-	respiration
[Ref.: #28014]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #28014]	nitrate ChEBI	-	reduction
[Ref.: #28014]	phenylethylamine ChEBI	-	respiration
[Ref.: #28014]	propionate ChEBI	-	respiration
[Ref.: #28014]	psicose ChEBI	+	respiration
[Ref.: #28014]	putrescine ChEBI	-	respiration
[Ref.: #28014]	quinate ChEBI	-	respiration
[Ref.: #31738]	raffinose ChEBI	+	carbon source
[Ref.: #28014]	raffinose ChEBI	+	respiration
[Ref.: #28014]	raffinose ChEBI	-	builds acid from
[Ref.: #28014]	ribitol ChEBI	-	builds acid from
[Ref.: #28014]	ribitol ChEBI	-	respiration
[Ref.: #28014]	sebacic acid ChEBI	-	respiration
[Ref.: #28014]	sorbose ChEBI	-	builds acid from
[Ref.: #28014]	starch ChEBI	+	degradation
[Ref.: #28014]	starch ChEBI	+	hydrolysis
[Ref.: #28014]	succinamate ChEBI	-	respiration
[Ref.: #28014]	succinate ChEBI	-	respiration
[Ref.: #31738]	sucrose ChEBI	+	carbon source
[Ref.: #28014]	sucrose ChEBI	+	oxidation
[Ref.: #28014]	sucrose ChEBI	+	respiration
[Ref.: #31738]	threonine ChEBI	+	carbon source
[Ref.: #28014]	thymidine ChEBI	-	respiration
[Ref.: #31738]	trehalose ChEBI	+	carbon source
[Ref.: #28014]	tryptophan ChEBI	-	energy source
[Ref.: #28014]	turanose ChEBI	+	respiration
[Ref.: #28014]	tween 20 ChEBI	+	degradation
[Ref.: #28014]	tween 40 ChEBI	+	degradation
[Ref.: #28014]	tween 80 ChEBI	-	respiration
[Ref.: #28014]	tween 80 ChEBI	+	degradation
[Ref.: #28014]	uridine ChEBI	-	respiration
[Ref.: #28014]	urocanic acid ChEBI	-	respiration
[Ref.: #28014]	xylitol ChEBI	-	respiration
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #28014]	ampicillin ChEBI		yes
[Ref.: #28014]	carbenicillin ChEBI		yes
[Ref.: #28014]	chloramphenicol ChEBI		yes
[Ref.: #28014]	doxycycline ChEBI		yes
[Ref.: #28014]	erythromycin ChEBI		yes
[Ref.: #28014]	gentamicin ChEBI		yes
[Ref.: #28014]	kanamycin ChEBI		yes
[Ref.: #28014]	lincomycin ChEBI	yes
[Ref.: #28014]	neomycin ChEBI		yes
[Ref.: #28014]	oleandomycin ChEBI		yes
[Ref.: #28014]	penicillin g ChEBI		yes
[Ref.: #28014]	polymyxin b ChEBI		yes
[Ref.: #28014]	streptomycin ChEBI		yes
[Ref.: #28014]	tetracycline ChEBI		yes
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #28014]	acetoin ChEBI	no
[Ref.: #31738]	hydrogen sulfide ChEBI	yes
[Ref.: #28014]	hydrogen sulfide ChEBI	yes
[Ref.: #28014]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #28014]		acetoin ChEBI	-
[Ref.: #28014]		indole ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #28014]	acid phosphatase	+	3.1.3.2
[Ref.: #31738]	alkaline phosphatase	+	3.1.3.1
[Ref.: #28014]	alkaline phosphatase	+	3.1.3.1
[Ref.: #28014]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #28014]	alpha-fucosidase	+	3.2.1.51
[Ref.: #28014]	alpha-galactosidase	+	3.2.1.22
[Ref.: #28014]	alpha-glucosidase	+	3.2.1.20
[Ref.: #28014]	alpha-mannosidase	+	3.2.1.24
[Ref.: #28014]	arginine dihydrolase	-	3.5.3.6
[Ref.: #28014]	beta-galactosidase	+	3.2.1.23
[Ref.: #28014]	beta-glucosidase	+	3.2.1.21
[Ref.: #28014]	beta-glucuronidase	-	3.2.1.31
[Ref.: #31738]	catalase	+	1.11.1.6
[Ref.: #28014]	cystine arylamidase	+	3.4.11.3
[Ref.: #31738]	cytochrome oxidase	+	1.9.3.1
[Ref.: #28014]	esterase (C 4)	+
[Ref.: #28014]	esterase Lipase (C 8)	+
[Ref.: #28014]	leucine arylamidase	+	3.4.11.1
[Ref.: #28014]	lipase (C 14)	-
[Ref.: #28014]	lysine decarboxylase	-	4.1.1.18
[Ref.: #28014]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #28014]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #28014]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #28014]	trypsin	+	3.4.21.4
[Ref.: #28014]	tryptophan deaminase	-	4.1.99.1
[Ref.: #28014]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8343]	Sample type/isolated from	sea urchin Strongylocentrotus intermedius
[Ref.: #8343]	Host species	Strongylocentrotus intermedius
[Ref.: #8343]	Geographic location (country and/or sea, region)	Sea of Japan, Gulf of Peter the Great, Troitsa Bay
[Ref.: #8343]	Country	Russia
[Ref.: #8343]	Country ISO 3 Code	RUS
[Ref.: #8343]	Continent	Asia

[Ref.: #28014]	Sample type/isolated from	Troitsa Bay, Gulf of Peter the Great
[Ref.: #28014]	Geographic location (country and/or sea, region)	East Sea, Troitsa Bay, Gulf of Peter the Great
* marker position based on {}

Isolation sources categories

#Host	#Invertebrates (Other)	#Echinodermata
#Environmental	#Aquatic	#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ185611 (>99% sequence identity) for Echinicola pacifica subclade from Microbeatlas

Aquatic Samples	23
Soil Samples	4
Animal Samples	2
Plant Samples	1
Total Samples	30

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8343]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8343]	Echinicola pacifica strain KMM 6172 16S ribosomal RNA gene, partial sequence	DQ185611	1363	ENA	346377 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Echinicola pacifica KCTC 12368	GCA_014651455	contig	GenBank	346377 tax ID	*
[Ref.: #66792]	Echinicola pacifica DSM 19836	GCA_000373245	scaffold	GenBank	1121859 tax ID	*
[Ref.: #66792]	Echinicola pacifica DSM 19836	1121859.3	wgs	PATRIC	1121859 tax ID	*
[Ref.: #66792]	Echinicola pacifica strain KCTC 12368	346377.3	wgs	PATRIC	346377 tax ID	*
[Ref.: #66792]	Echinicola pacifica DSM 19836	2515154083	draft	JGI IMG/M	1121859 tax ID	*

[Ref.: #31738]	GC-content	44-45 mol%
[Ref.: #28014]	GC-content	44-45 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #8343]	GC-content	43.8 mol%	sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Echinicola pacifica DSM 19836 DSM 19836 NCBI: GCA_000373245.1
[Ref.: #69480]	motile	no	85.858	no
[Ref.: #69480]	flagellated	no	96.889	no
[Ref.: #69480]	gram-positive	no	97.907	yes
[Ref.: #69480]	anaerobic	no	99.397	no
[Ref.: #69480]	aerobic	yes	87.68	yes
[Ref.: #69480]	halophile	no	62.536	no
[Ref.: #69480]	spore-forming	no	95.164	no
[Ref.: #69480]	thermophile	no	98.948	no
[Ref.: #69480]	glucose-util	yes	89.154	yes
[Ref.: #69480]	glucose-ferment	no	87.117	yes

Availability in culture collections External links

[Ref.: #8343]

Culture collection no.

DSM 19836, KCTC 12368, KMM 6172, LMG 23350

[Ref.: #86710]

SI-ID 138410

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Phylogeny	Echinicola sediminis sp. nov., a marine bacterium isolated from coastal sediment.	Lee DW, Lee AH, Lee H, Kim JJ, Khim JS, Yim UH, Kim BS	Int J Syst Evol Microbiol	10.1099/ijsem.0.002118	2017	*
Phylogeny	Echinicola strongylocentroti sp. nov., isolated from a sea urchin Strongylocentrotus intermedius.	Jung YJ, Yang SH, Kwon KK, Bae SS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001691	2017	*
Enzymology	Structure of the O-specific polysaccharide from a marine bacterium Echinicola pacifica capital KA, Cyrilliccapital EM, Cyrilliccapital EM, Cyrillic 6172(capital TE, Cyrillic) containing 2,3-diacetamido-2,3-dideoxy-D-glucuronic acid.	Tomshich SV, Kokoulin MS, Kalinovsky AI, Nedashkovskaya OI, Komandrova NA	Carbohydr Res	10.1016/j.carres.2016.03.003	2016	*
Phylogeny	Echinicola jeungdonensis sp. nov., isolated from a solar saltern.	Kim H, Joung Y, Ahn TS, Joh K	Int J Syst Evol Microbiol	10.1099/ijs.0.026765-0	2010	*
Phylogeny	Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius.	Nedashkovskaya OI, Kim SB, Vancanneyt M, Lysenko AM, Shin DS, Park MS, Lee KH, Jung WJ, Kalinovskaya NI, Mikhailov VV, Bae KS, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.64156-0	2006	*
	The Unusual Lipid A Structure and Immunoinhibitory Activity of LPS from Marine Bacteria Echinicola pacifica KMM 6172(T) and Echinicola vietnamensis KMM 6221(T).	Pither MD, Mantova G, Scaglione E, Pagliuca C, Colicchio R, Vitiello M, Chernikov OV, Hua KF, Kokoulin MS, Silipo A, Salvatore P, Molinaro A, Di Lorenzo F	Microorganisms	10.3390/microorganisms9122552	2021	*

References

#8343

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19836

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28014

IJSEM 953 2006 ( DOI 10.1099/ijs.0.64156-0 , PubMed 16627637 )

#31738

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28014 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#86710

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID138410.1 )

#28014

IJSEM 953 2006 ( DOI 10.1099/ijs.0.64156-0 , PubMed 16627637 )

* These data were automatically processed and therefore are not curated

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Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Echinicola pacifica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Echinicola pacifica DSM 19836 DSM 19836

Change proposal

Change proposal