Kiloniella laminariae (DSM 19542, JCM 14845, NCIMB 14374)

Name: Kiloniella laminariae (DSM 19542, JCM 14845, NCIMB 14374)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17694

Type strain

Strain Designation LD81

Culture col. no. DSM 19542 JCM 14845 NCIMB 14374 LD81

NCBI tax ID(s) 1122135 454162

Special Collections DSMZ JCM

Links

Kiloniella laminariae LD81 is a psychrophilic prokaryote that was isolated from brown alga Laminaria saccharina.

psychrophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 407897

JCM 14845,NCIMB 14374,DSM 19542

@ref 20215

Last LPSN update 2025-12-16 09:51:09

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Kiloniellaceae

Genus Kiloniella

Species Kiloniella laminariae

Full scientific name Kiloniella laminariae Wiese et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.5
125439	negative	99.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8162	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8162	positive	growth	20	psychrophilic
67770	positive	growth	20	psychrophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	91.4

Spore formation

@ref	Spore formation	Confidence
125438		90.727
125439		99

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Algae	#Brown Algae

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
8162	brown alga Laminaria saccharina	Laminaria saccharina	Baltic Sea, Kiel Bight	Germany	DEU	Europe
67770	Specimen of Laminaria saccharina collected from the Baltic sea in the Kiel Bight (Germany)	Laminaria saccharina

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8162	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM37400v1 assembly for Kiloniella laminariae DSM 19542	scaffold	GCA_000374005	1122135.3	2515154130	1122135	70.93

Genome browser: GCA_000374005

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8162	Kiloniella laminariae partial 16S rRNA gene, type strain LD81T	AM749667	1450		1122135

GC content

@ref	GC-content (mol%)	Method
8162	50	high performance liquid chromatography (HPLC)
67770	51.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Kiloniella laminariae DSM 19542
NCBI: GCA_000374005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.00	no
125439	motility	BacteriaNetⓘ	yes	83.90	no
125439	gram_stain	BacteriaNetⓘ	negative	99.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	91.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Kiloniella laminariae DSM 19542
PATRIC: 1122135.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.50	no
125438	anaerobic	anaerobicⓘ	no	95.10	no
125438	spore-forming	spore-formingⓘ	no	90.73	no
125438	aerobic	aerobicⓘ	yes	70.90	no
125438	thermophilic	thermophileⓘ	no	97.37	no
125438	flagellated	motile2+ⓘ	yes	75.79	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	An updated phylogeny of the Alphaproteobacteria reveals that the parasitic Rickettsiales and Holosporales have independent origins.	Munoz-Gomez SA, Hess S, Burger G, Lang BF, Susko E, Slamovits CH, Roger AJ.	Elife	10.7554/elife.42535	2019
Phylogeny	Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species.	Wiese J, Imhoff JF, Horn H, Borchert E, Kyrpides NC, Goker M, Klenk HP, Woyke T, Hentschel U	Arch Microbiol	10.1007/s00203-019-01791-0	2019
Phylogeny	Kiloniella laminariae gen. nov., sp. nov., an alphaproteobacterium from the marine macroalga Laminaria saccharina.	Wiese J, Thiel V, Gartner A, Schmaljohann R, Imhoff JF	Int J Syst Evol Microbiol	10.1099/ijs.0.001651-0	2009

References

#8162	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19542
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Kiloniella laminariae (DSM 19542, JCM 14845, NCIMB 14374)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000374005

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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