Name: Thermovibrio ruber ED11/3LLK
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17645

Type strain:

Species: Thermovibrio ruber

Strain Designation: ED11/3LLK

Culture col. no.: DSM 14644, JCM 11468

Strain history: H. Huber and K. O. Stetter ED11/3LLK.

NCBI tax ID(s): 171869 (species)

SI-ID 87988

DSM 14644, JCM 11468

Section

Thermovibrio ruber ED11/3LLK is an anaerobe, hyperthermophilic bacterium that was isolated from sediment sample of submarine hydrothermal system.

anaerobe
hyperthermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Aquificota*
	Class	*Aquificia*
	Order	*Desulfurobacteriales*
	Family	*Desulfurobacteriaceae*
	Genus	*Thermovibrio*
	Species	**Thermovibrio ruber**
	Full Scientific Name (LPSN)	Thermovibrio ruber Huber et al. 2002

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5429]

Culture medium

THERMOVIBRIO MEDIUM (DSMZ Medium 961)

[Ref.: #5429]

Culture medium growth

[Ref.: #5429]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5429]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5429]			growth	80 °C
[Ref.: #67770]			growth	75 °C

[Ref.: #5429]	Temperature range	hyperthermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5429]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5429]	Sample type/isolated from	sediment sample of submarine hydrothermal system
[Ref.: #5429]	Geographic location (country and/or sea, region)	Off the beach of Lihir Island
[Ref.: #5429]	Country	Papua New Guinea
[Ref.: #5429]	Country ISO 3 Code	PNG
[Ref.: #5429]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Sandy sediments from the beach off Lihir Island
[Ref.: #67770]	Country	Papua New Guinea
[Ref.: #67770]	Country ISO 3 Code	PNG
[Ref.: #67770]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5429]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5429]	Thermovibrio rubrum 16S rRNA gene, strain DSM14644	AJ316619	1512	ENA	171869 tax ID

[Ref.: #5429]	GC-content	45 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	47 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #5429]

Culture collection no.

DSM 14644, JCM 11468

[Ref.: #86636]

SI-ID 87988

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Balnearium lithotrophicum gen. nov., sp. nov., a novel thermophilic, strictly anaerobic, hydrogen-oxidizing chemolithoautotroph isolated from a black smoker chimney in the Suiyo Seamount hydrothermal system.	Takai K, Nakagawa S, Sako Y, Horikoshi K	Int J Syst Evol Microbiol	10.1099/ijs.0.02773-0	2003	*
Phylogeny	Thermovibrio ruber gen. nov., sp. nov., an extremely thermophilic, chemolithoautotrophic, nitrate-reducing bacterium that forms a deep branch within the phylum Aquificae.	Huber H, Diller S, Horn C, Rachel R	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1859	2002	*

References

#5429

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14644

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#86636

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID87988.1 )

* These data were automatically processed and therefore are not curated

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