Ancylobacter rudongensis (DSM 17131, AS 1.1761, YCM 11671)

Name: Ancylobacter rudongensis (DSM 17131, AS 1.1761, YCM 11671)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17402

Type strain

Strain Designation YCM 11671

Culture col. no. DSM 17131 AS 1.1761 YCM 11671 NCIMB 14355 CIP 108316 3 more

NCBI tax ID(s) 177413

Special Collections DSMZ JCM CIP Literature strains

History <- JCM <- H.L. Zhou, Chin. Academy of Sciences, Beijing; AS 1.1761 AS 1.1761 <-- Y. H. Xin. CIP <- 2004, JCM <- 2002, AS <- Y.H. Xin

Links

Ancylobacter rudongensis YCM 11671 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from roots of Spartina anglica.

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 131414

AS 1.1761,JCM 11671,DSM 17131,BCRC 17434,CCRC 17434,CIP 108316,CGMCC 1.1761

@ref 20215

Last LPSN update 2026-02-09 11:22:12

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Xanthobacteraceae

Genus Ancylobacter

Species Ancylobacter rudongensis

Full scientific name Ancylobacter rudongensis Xin et al. 2004

BacDive ID	Other strains from **Ancylobacter rudongensis** (1)	Type strain
17386	A. rudongensis AD27, DSM 9000

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
29894	negative	rod-shaped
125438	negative		97.4
125439	negative		97.8
122301	negative	rod-shaped

Colony morphology

Pigmentation

29894

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6778	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
39992	MEDIUM 593 - for Ancylobacter rudongensis		Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (1.000g);Yeast extract (1.000 g);Peptone (1.000 g)
122301	CIP Medium 289	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6778	positive	growth	30
29894	positive	growth	05-44
29894	positive	optimum	29
39992	positive	growth	30
67770	positive	growth	30
122301	positive	growth	15-37
122301	negative	growth	10
122301	negative	growth	41
122301	negative	growth	45

Culture pH

@ref	Ability	Type	PH	PH range
29894	positive	optimum	6.9
29894	positive	growth	5.6-9.9	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
122301	obligate aerobe
125439	obligate aerobe	96.8

Spore formation

@ref	Spore formation	Confidence
125439		97.2

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29894	NaCl	positive	growth	0-5 %
29894	NaCl	positive	optimum	2.5 %
122301	NaCl	positive	growth	0-4 %
122301	NaCl		growth	6 %
122301	NaCl		growth	8 %
122301	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29894	16449 ChEBI	alanine	+	carbon source
29894	22599 ChEBI	arabinose	+	carbon source
29894	17057 ChEBI	cellobiose	+	carbon source
122301	16947 ChEBI	citrate	+	carbon source
29894	23652 ChEBI	dextrin	+	carbon source
29894	4853 ChEBI	esculin	+	hydrolysis
122301	4853 ChEBI	esculin	+	hydrolysis
29894	28757 ChEBI	fructose	+	carbon source
29894	28260 ChEBI	galactose	+	carbon source
29894	17234 ChEBI	glucose	+	carbon source
29894	17754 ChEBI	glycerol	+	carbon source
122301	606565 ChEBI	hippurate	-	hydrolysis
29894	17716 ChEBI	lactose	+	carbon source
29894	17306 ChEBI	maltose	+	carbon source
29894	29864 ChEBI	mannitol	+	carbon source
29894	28053 ChEBI	melibiose	+	carbon source
29894	17632 ChEBI	nitrate	+	reduction
122301	17632 ChEBI	nitrate	-	reduction
122301	17632 ChEBI	nitrate	-	respiration
122301	16301 ChEBI	nitrite	-	reduction
29894	26271 ChEBI	proline	+	carbon source
29894	15963 ChEBI	ribitol	+	carbon source
29894	33942 ChEBI	ribose	+	carbon source
29894	30911 ChEBI	sorbitol	+	carbon source
29894	17992 ChEBI	sucrose	+	carbon source
29894	27082 ChEBI	trehalose	+	carbon source
29894	18222 ChEBI	xylose	+	carbon source

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122301	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122301	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122301	15688 ChEBI	acetoin	-
122301	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122301	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122301	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
122301	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122301	caseinase	-	3.4.21.50
122301	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
122301	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
122301	gamma-glutamyltransferase	+	2.3.2.2
122301	gelatinase	-
122301	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
122301	lipase	-
68382	lipase (C 14)	-		from API zym
122301	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
122301	ornithine decarboxylase	-	4.1.1.17
122301	oxidase	+
122301	phenylalanine ammonia-lyase	-	4.3.1.24
122301	protease	-
68382	trypsin	+	3.4.21.4	from API zym
122301	tryptophan deaminase	-
122301	tween esterase	+
122301	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	threonine metabolism	100	10 of 10
66794	ethanol fermentation	100	2 of 2
66794	enterobactin biosynthesis	100	3 of 3
66794	photosynthesis	100	14 of 14
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	ribulose monophosphate pathway	100	2 of 2
66794	butanoate fermentation	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	starch degradation	100	10 of 10
66794	methanofuran biosynthesis	100	5 of 5
66794	CMP-KDO biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	sulfopterin metabolism	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	chorismate metabolism	100	9 of 9
66794	pentose phosphate pathway	100	11 of 11
66794	kanosamine biosynthesis II	100	2 of 2
66794	Entner Doudoroff pathway	100	10 of 10
66794	adipate degradation	100	2 of 2
66794	glycogen metabolism	100	5 of 5
66794	cellulose degradation	100	5 of 5
66794	folate polyglutamylation	100	1 of 1
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	gluconeogenesis	100	8 of 8
66794	citric acid cycle	92.86	13 of 14
66794	phenylalanine metabolism	92.31	12 of 13
66794	proline metabolism	90.91	10 of 11
66794	propionate fermentation	90	9 of 10
66794	allantoin degradation	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	ketogluconate metabolism	87.5	7 of 8
66794	propanol degradation	85.71	6 of 7
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	vitamin B12 metabolism	85.29	29 of 34
66794	vitamin B1 metabolism	84.62	11 of 13
66794	leucine metabolism	84.62	11 of 13
66794	NAD metabolism	83.33	15 of 18
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	peptidoglycan biosynthesis	80	12 of 15
66794	flavin biosynthesis	80	12 of 15
66794	factor 420 biosynthesis	80	4 of 5
66794	alanine metabolism	79.31	23 of 29
66794	arginine metabolism	79.17	19 of 24
66794	d-mannose degradation	77.78	7 of 9
66794	glycolysis	76.47	13 of 17
66794	degradation of sugar alcohols	75	12 of 16
66794	acetate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	purine metabolism	74.47	70 of 94
66794	tryptophan metabolism	73.68	28 of 38
66794	methionine metabolism	73.08	19 of 26
66794	vitamin B6 metabolism	72.73	8 of 11
66794	oxidative phosphorylation	72.53	66 of 91
66794	cysteine metabolism	72.22	13 of 18
66794	glutathione metabolism	71.43	10 of 14
66794	heme metabolism	71.43	10 of 14
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	degradation of pentoses	71.43	20 of 28
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	urea cycle	69.23	9 of 13
66794	lysine metabolism	69.05	29 of 42
66794	non-pathway related	68.42	26 of 38
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	methane metabolism	66.67	2 of 3
66794	lipid metabolism	64.52	20 of 31
66794	tetrahydrofolate metabolism	64.29	9 of 14
66794	d-xylose degradation	63.64	7 of 11
66794	metabolism of disaccharids	63.64	7 of 11
66794	pyrimidine metabolism	62.22	28 of 45
66794	histidine metabolism	62.07	18 of 29
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	gallate degradation	60	3 of 5
66794	methanogenesis from CO2	58.33	7 of 12
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	tyrosine metabolism	57.14	8 of 14
66794	phosphatidylethanolamine bioynthesis	53.85	7 of 13
66794	3-phenylpropionate degradation	53.33	8 of 15
66794	degradation of sugar acids	52	13 of 25
66794	cyclohexanol degradation	50	2 of 4
66794	carnitine metabolism	50	4 of 8
66794	lactate fermentation	50	2 of 4
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	quinate degradation	50	1 of 2
66794	androgen and estrogen metabolism	50	8 of 16
66794	glycine metabolism	50	5 of 10
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	biotin biosynthesis	50	2 of 4
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	coenzyme M biosynthesis	50	5 of 10
66794	sulfate reduction	46.15	6 of 13
66794	4-hydroxymandelate degradation	44.44	4 of 9
66794	nitrate assimilation	44.44	4 of 9
66794	polyamine pathway	43.48	10 of 23
66794	arachidonate biosynthesis	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	phenol degradation	40	8 of 20
66794	hydrogen production	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	vitamin K metabolism	40	2 of 5
66794	myo-inositol biosynthesis	40	4 of 10
66794	glycine betaine biosynthesis	40	2 of 5
66794	arachidonic acid metabolism	38.89	7 of 18
66794	degradation of hexoses	38.89	7 of 18
66794	ascorbate metabolism	36.36	8 of 22
66794	sphingosine metabolism	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	catecholamine biosynthesis	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	bile acid biosynthesis, neutral pathway	23.53	4 of 17
66794	carotenoid biosynthesis	22.73	5 of 22

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122301	-	+	+	-	-	+	+	-	+	-	+	+	-	-	-	-	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122301	not determinedn.d.	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	+	-	+	-	-	+	-	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
6778	roots of Spartina anglica	Spartina anglica	Jiangsu Province, beach	China	CHN	Asia
67770	Roots of Spartina anglica in Rudong Country	Spartina anglica	Jiangsu Province	China	CHN	Asia
122301	Plant, Root of Spartina anglica

Taxonmaps

69479

Global distribution of 16S sequence AY056830 (>99% sequence identity) for Ancylobacter from Microbeatlas

Aquatic Samples	2318
Soil Samples	1085
Animal Samples	1936
Plant Samples	762
Total Samples	6101

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6778	1	Risk group (German classification) According to TRBA 466
122301	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2596583652 annotated assembly for Ancylobacter rudongensis CGMCC 1.1761	contig	GCA_900100155	177413.3	2596583652	177413	75.58

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6778	Ancylobacter sp. AS1.1761 16S ribosomal RNA gene, partial sequence	AY056830	1457		177413

GC content

@ref	GC-content (mol%)	Method
29894	68.2
67770	68.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Ancylobacter rudongensis CGMCC 1.1761
NCBI: GCA_900100155

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	97.20	no
125439	motility	BacteriaNetⓘ	yes	63.30	no
125439	gram_stain	BacteriaNetⓘ	negative	97.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Ancylobacter rudongensis strain CGMCC 1.1761
PATRIC: 177413.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.40	no
125438	anaerobic	anaerobicⓘ	no	96.01	no
125438	spore-forming	spore-formingⓘ	no	88.36	no
125438	aerobic	aerobicⓘ	yes	82.53	yes
125438	thermophilic	thermophileⓘ	no	96.53	yes
125438	flagellated	motile2+ⓘ	yes	63.09	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Mammalian carcass decay increases carbon storage and temporal turnover of carbon-fixing microbes in alpine meadow soil.	Wang X, Han Q, Yu Q, Wang S, Yang J, Su W, Wan-Yan R, Sun X, Li H.	Environ Res	10.1016/j.envres.2023.115653	2023
	The engineering of TBBPA-degrading synthetic microbiomes with integrated strategies.	Wu T, Guo SZ, Zhang Y, Zhao XZ, Ran CG, Liu FL, Wang RH, Li DF, Zhu HZ, Jiang CY, Shen XH, Liu SJ.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00777-9	2025
Phylogeny	Developing an automated mechanism to identify medical articles from wikipedia for knowledge extraction.	Yu L, Yu S.	Int J Med Inform	10.1016/j.ijmedinf.2020.104234	2020
Metabolism	Bacterial nanocellulose production from naphthalene.	Marin P, Martirani-Von Abercron SM, Urbina L, Pacheco-Sanchez D, Castaneda-Catana MA, Retegi A, Eceiza A, Marques S.	Microb Biotechnol	10.1111/1751-7915.13399	2019
Phylogeny	Ancylobacter pratisalsi sp. nov. with plant growth promotion abilities from the rhizosphere of Plantago winteri Wirtg.	Suarez C, Ratering S, Schafer J, Schnell S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002320	2017
Phylogeny	Description of Ancylobacter oerskovii sp. nov. and two additional strains of Ancylobacter polymorphus.	Lang E, Swiderski J, Stackebrandt E, Schumann P, Sproer C, Sahin N	Int J Syst Evol Microbiol	10.1099/ijs.0.65666-0	2008
Phylogeny	Ancylobacter polymorphus sp. nov. and Ancylobacter vacuolatus sp. nov.	Xin YH, Zhou YG, Chen WX	Int J Syst Evol Microbiol	10.1099/ijs.0.64118-0	2006
Phylogeny	Ancylobacter rudongensis sp. nov., isolated from roots of Spartina anglica.	Xin YH, Zhou YG, Zhou HL, Chen WX	Int J Syst Evol Microbiol	10.1099/ijs.0.02466-0	2004

References

#6778	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17131
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26267	IJSEM 385 2004 ( DOI 10.1099/ijs.0.02466-0 , PubMed 15023948 )
#29894	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26267
#39992	; Curators of the CIP;
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122301	Collection of Institut Pasteur ; Curators of the CIP; CIP 108316
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Ancylobacter rudongensis (DSM 17131, AS 1.1761, YCM 11671)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900100155

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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