Gleimia europaea (DSM 11078, CCUG 35470, DMMZ 1284)

Name: Gleimia europaea (DSM 11078, CCUG 35470, DMMZ 1284)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 173

Type strain

Culture col. no. DSM 11078 CCUG 35470 DMMZ 1284 CIP 105309

NCBI tax ID(s) 66228

Special Collections DSMZ CCUG CIP

Links

Gleimia europaea DSM 11078 is a facultative anaerobe, mesophilic, Gram-positive prokaryote that was isolated from suprapubic abscess.

Gram-positive rod-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 49024

CCUG 35470,DSM 11078,CIP 105309,CCM 4675

@ref 20215

Last LPSN update 2025-12-16 09:46:48

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Gleimia

Species Gleimia europaea

Full scientific name Gleimia europaea (Funke et al. 1997) Nouioui et al. 2018

Synonyms (1)

Actinomyces europaeus

BacDive ID	Other strains from **Gleimia europaea** (23)	Type strain
138197	G. europaea CIP 105308, CCUG 32789 A, ATCC 700353, LMG ... (type strain)
171	G. europaea DSM 11076, DMMZ 747
172	G. europaea DSM 11077, CCUG 35467, DMMZ 1113, CIP 105400
23521	G. europaea V2561, DSM 26657
136407	G. europaea CIP 105401, DMMZ 2233
147002	G. europaea CCUG 32631
147071	G. europaea CCUG 32789 B
147315	G. europaea CCUG 33355
148019	G. europaea CCUG 34687
148494	G. europaea CCUG 35548, LMG 16600
148495	G. europaea CCUG 35549, LMG 16601
148496	G. europaea CCUG 35550, LMG 16902
148500	G. europaea CCUG 35554, LMG 16599
151835	G. europaea CCUG 45006
152495	G. europaea CCUG 46938
152818	G. europaea CCUG 47706
155125	G. europaea CCUG 56532 B
155277	G. europaea CCUG 57176
155838	G. europaea CCUG 59458
155849	G. europaea CCUG 59469
156236	G. europaea CCUG 60829
156240	G. europaea CCUG 60836
172712	G. europaea CIMB15, CIMB 04-8513, CRBIP17.15

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
119141	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
4193	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
39254	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
119141	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4193	positive	growth	37	mesophilic
39254	positive	growth	37	mesophilic
119141	positive	growth	25-41
119141	negative	growth	10
119141	negative	growth	45

Physiology and metabolism

Oxygen tolerance

119141

Oxygen tolerancefacultative anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119141	NaCl	positive	growth	0-8 %
119141	NaCl		growth	10 %

Murein

@ref	Murein short key	Type
4193	A11.51	A5alpha L-Lys-L-Lys-D-Glu

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
119141	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
119141	4853 ChEBI	esculin	-	hydrolysis
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68379	28087 ChEBI	glycogen	+	fermentation	from API Coryne
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
119141	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
119141	17632 ChEBI	nitrate	-	reduction
119141	17632 ChEBI	nitrate	+	respiration
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
119141	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68381	17992 ChEBI	sucrose	-	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
119141	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68381	15688 ChEBI	acetoin	from API rID32STR
68380	35581 ChEBI	indole	from API rID32A
119141	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
68381	15688 ChEBI	acetoin	-			from API rID32STR
119141	15688 ChEBI	acetoin	-
119141	17234 ChEBI	glucose		-
68380	35581 ChEBI	indole			-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
119141	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68380	alpha-galactosidase	+	3.2.1.22	from API rID32A
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
119141	amylase	-
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68382	beta-galactosidase	+	3.2.1.23	from API zym
119141	beta-galactosidase	+	3.2.1.23
68381	beta-galactosidase	+	3.2.1.23	from API rID32STR
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68381	beta-glucosidase	-	3.2.1.21	from API rID32STR
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
119141	catalase	+	1.11.1.6
68379	catalase	-	1.11.1.6	from API Coryne
119141	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119141	gamma-glutamyltransferase	+	2.3.2.2
119141	gelatinase	-
68379	gelatinase	-		from API Coryne
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	+		from API rID32A
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68380	histidine arylamidase	+		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
119141	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
119141	lipase	-
68382	lipase (C 14)	-		from API zym
119141	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
119141	ornithine decarboxylase	-	4.1.1.17
119141	oxidase	-
119141	phenylalanine ammonia-lyase	-	4.3.1.24
68380	phenylalanine arylamidase	+		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
119141	protease	-
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	+		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
119141	tryptophan deaminase	-
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
119141	tween esterase	-
68380	tyrosine arylamidase	+		from API rID32A
119141	urease	-	3.5.1.5
68381	urease	-	3.5.1.5	from API rID32STR
68380	urease	-	3.5.1.5	from API rID32A
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	+		from API zym

Fatty acid profile

Metadata FA analysis

@ref

52752

Fatty acid	Percentage	ECL
C18:2 ω6,9c/C18:0 ANTE	28.6	17.724
C16:0	26	16
Unidentified	14.9	17.793
C18:1 ω9c	14.4	17.769
C18:0	9.5	18
C16:1 ω7c	3.3	15.819
C14:0	2.4	14
Unidentified	0.9	19.572

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
52752	-	-	-	-	-	+	+	-	+	-	-	-	+	+	-	-	+	-	+	+	-

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
52752	-	-	+	+	-	+	+	+	-	-	-	-	+	+	-	+	-	-	+	-
119141	-	-	+	+	-	+	+	-	-	-	-	+	-	+	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
119141	not determinedn.d.	+/-	-	-	-	-	-	-	+/-	-	+/-	+/-	+/-	+/-	-	-	-	-	-	-	+/-	+/-	-	-	-	+/-	-	-	+/-	-	+/-	+/-	+/-	-	-	-	+/-	+/-	-	-	+/-	-	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
52752	-	-	+	+	-	+	+	-	-	-	+	-	-	-	-	-	-	+	+	+	+	+	-	+	+	+	+	-	+

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
52752	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	+	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body-Site	#Other	#Abdomen
#Host Body-Site	#Other	#Abscess

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date
4193	suprapubic abscess
52752	Human suprapubic abscess,28-yr-old male
119141	Human, Suprapubic abscess	Switzerland	CHE	Europe	1995

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4193	2	Risk group (German classification) According to TRBA 466
119141	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome-based predictions

Literature

References

#4193	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11078
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#39254	; Curators of the CIP;
#52752	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 35470
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68380	Automatically annotated from API rID32A .
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#119141	Collection of Institut Pasteur ; Curators of the CIP; CIP 105309
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gleimia europaea (DSM 11078, CCUG 35470, DMMZ 1284)

Name and taxonomic classification