Chryseobacterium indologenes (CIP 109978, Van Dick)

Name: Chryseobacterium indologenes (CIP 109978, Van Dick)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 172960

Type strain

Culture col. no. CIP 109978 Van Dick

NCBI tax ID(s) 253

Special Collections CIP

Links

Chryseobacterium indologenes CIP 109978 is an obligate aerobe, Gram-negative, rod-shaped prokaryote that was isolated from Human, Wound.

Gram-negative rod-shaped obligate aerobe

Name and taxonomic classification

SI-ID 413606

CIP 109978

@ref 20215

Last LPSN update 2025-12-16 10:11:25

Domain Pseudomonadati

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium indologenes

Full scientific name Chryseobacterium indologenes (Yabuuchi et al. 1983) Vandamme et al. 1994

Synonyms (1)

Flavobacterium indologenes

BacDive ID	Other strains from **Chryseobacterium indologenes** (58)	Type strain
5671	C. indologenes DSM 16777, ATCC 29897, CCUG 14483, CDC 3716, ... (type strain)
134710	C. indologenes Carton, CIP 109969
134973	C. indologenes CIP 109967
135113	C. indologenes 590.83, CIP 100344
135152	C. indologenes 682.78, CIP 103065
135153	C. indologenes 279.75, CIP 103069
135157	C. indologenes R 852, CIP 103094
135158	C. indologenes R 851, CIP 103095
135159	C. indologenes R 627, CIP 103096
135188	C. indologenes 189.79, CIP 103055
135788	C. indologenes 33.78, B53981, CIP 78.48
135833	C. indologenes 522.84, CIP 100992
135857	C. indologenes 162-86, CIP 102215
136164	C. indologenes 729, 648.75, CIP 103074
136172	C. indologenes R 705, CIP 103102
136234	C. indologenes CIP 103626, ATCC 49471
137230	C. indologenes 2398, R 858, CIP 103092
137346	C. indologenes 469.83, CIP 100269
137815	C. indologenes 215.84, CIP 100761
137991	C. indologenes 419-86, CIP 102419
138406	C. indologenes R 760, CIP 103101
138609	C. indologenes 241.75, CIP 103068
138769	C. indologenes 638.75, CIP 103072
139084	C. indologenes 792.84, CIP 101166
139440	C. indologenes 177-77, CIP 111041
139448	C. indologenes Millo, CIP 111085, CIP 200792
139449	C. indologenes Rouault 2401, CIP 111087, CIP 200799
139450	C. indologenes Big, CIP 111080, CIP 200737
139451	C. indologenes Kac, CIP 111083, CIP 200783
139452	C. indologenes Gallet, CIP 111084, CIP 200791
139478	C. indologenes CIP 111070, CIP 200648
139479	C. indologenes Lair, CIP 111074, CIP 200703
139512	C. indologenes Tchang, CIP 111068, CIP 200630
139513	C. indologenes Delvoix, CIP 111069, CIP 200634
139514	C. indologenes Ben, CIP 111073, CIP 200683
139553	C. indologenes Bordin, CIP 111079, CIP 200726
139599	C. indologenes Gouélian, CIP 109982
142408	C. indologenes CCUG 12408
143842	C. indologenes CCUG 21463
144077	C. indologenes CCUG 22795
144636	C. indologenes CCUG 25993
144828	C. indologenes CCUG 26680
147966	C. indologenes CCUG 34592
149934	C. indologenes CCUG 38711
150974	C. indologenes CCUG 42919
150985	C. indologenes CCUG 42938
151781	C. indologenes CCUG 44868
152178	C. indologenes CCUG 45982
152707	C. indologenes CCUG 47431
153574	C. indologenes CCUG 50232
154777	C. indologenes CCUG 55149
156350	C. indologenes CCUG 61253
156754	C. indologenes CCUG 64871
172961	C. indologenes R647, Peslerbe, CIP 109988
172962	C. indologenes Rouault 2398, CIP 111086, CIP 200798
175138	C. indologenes Dres_ChryseobactSp_12, DSM 107724
175139	C. indologenes Dres_ChryseobactSp_14, DSM 107732
176846	C. indologenes NiuAA5, DSM 114485

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
120093	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link
120093	CIP Medium 566		Medium recipe at CIP
120093	CIP Medium 72		Medium recipe at CIP

Physiology and metabolism

Oxygen tolerance

120093

Oxygen toleranceobligate aerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
120093	17632 ChEBI	nitrate	+	reduction
120093	16301 ChEBI	nitrite	+	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120093	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120093	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120093	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
120093	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120093	-	+	+	+	-	+	+	-	+	+	+	+	-	-	-	+	-	+	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Isolation date
120093	Human, Wound	1969

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
120093	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68382	Automatically annotated from API zym .
#120093	Collection of Institut Pasteur ; Curators of the CIP; CIP 109978
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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