Actinoallomurus coprocola (DSM 45450, KCTC 19542, NBRC 103688)

Name: Actinoallomurus coprocola (DSM 45450, KCTC 19542, NBRC 103688)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17008

Type strain

Strain Designation TT04-09

Culture col. no. DSM 45450 KCTC 19542 NBRC 103688 TT04-09

NCBI tax ID(s) 478106

Special Collections DSMZ KCTC Literature strains

History DSMZ <- NBRC; NBRC 103688 <- T. Tamura; TT04-09

Links

Actinoallomurus coprocola TT04-09 is an aerobe, spore-forming, rod-shaped bacterium that was isolated from cow dung.

spore-forming rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 406298

KCTC 19542,NBRC 103688,DSM 45450

@ref 20215

Last LPSN update 2026-05-29 08:28:55

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Thermomonosporaceae

Genus Actinoallomurus

Species Actinoallomurus coprocola

Full scientific name Actinoallomurus coprocola Tamura et al. 2009

Morphology

Cell morphology

@ref	Cell length	Cell width	Cell shape	Motility
29127	1.1 µm	0.75 µm	rod-shaped

Pigmentation

29127

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
16835	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
16835	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
16835	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
16835	ISP2 MEDIUM (DSMZ Medium 987)	Medium recipe at MediaDive	Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
16835	positive	growth	28
29127	positive	growth	20-37
29127	positive	optimum	28.5

Culture pH

@ref	Ability	Type	PH
29127	positive	optimum	6
29127	positive	growth	05-07

Physiology and metabolism

Oxygen tolerance

29127

Oxygen toleranceaerobe

Spore formation

29127

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29127	NaCl	positive	growth	0-3 %
29127	NaCl	positive	optimum	1.5 %

Observation

29127

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29127	16808 ChEBI	2-dehydro-D-gluconate	+	carbon source
29127	22599 ChEBI	arabinose	+	carbon source
29127	17057 ChEBI	cellobiose	+	carbon source
29127	4853 ChEBI	esculin	+	hydrolysis
29127	28757 ChEBI	fructose	+	carbon source
29127	28260 ChEBI	galactose	+	carbon source
29127	5417 ChEBI	glucosamine	+	carbon source
29127	17234 ChEBI	glucose	+	carbon source
29127	28087 ChEBI	glycogen	+	carbon source
29127	18403 ChEBI	L-arabitol	+	carbon source
29127	17716 ChEBI	lactose	+	carbon source
29127	25017 ChEBI	leucine	+	carbon source
29127	17306 ChEBI	maltose	+	carbon source
29127	29864 ChEBI	mannitol	+	carbon source
29127	28053 ChEBI	melibiose	+	carbon source
29127	17268 ChEBI	myo-inositol	+	carbon source
29127	506227 ChEBI	N-acetylglucosamine	+	carbon source
29127	16634 ChEBI	raffinose	+	carbon source
29127	26546 ChEBI	rhamnose	+	carbon source
29127	33942 ChEBI	ribose	+	carbon source
29127	17814 ChEBI	salicin	+	carbon source
29127	30911 ChEBI	sorbitol	+	carbon source
29127	17992 ChEBI	sucrose	+	carbon source
29127	27082 ChEBI	trehalose	+	carbon source
29127	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
29127	acid phosphatase	+	3.1.3.2
29127	alpha-galactosidase	+	3.2.1.22
29127	catalase	+	1.11.1.6
29127	gelatinase	+
29127	pyrazinamidase	+	3.5.1.B15
29127	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16835	cow dung	Futtsu, Chiba	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB364579 (>99% sequence identity) for Actinoallomurus from Microbeatlas

Aquatic Samples	27
Soil Samples	857
Animal Samples	14
Plant Samples	15
Total Samples	913

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16835	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16835	Actinoallomurus coprocola gene for 16S rRNA, partial sequence, strain: TT04-09 (= NBRC 103688)	AB364579	1438		478106

GC content

16835

GC-content (mol%)74

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinoallomurus oryzae sp. nov., an endophytic actinomycete isolated from roots of a Thai jasmine rice plant.	Indananda C, Thamchaipenet A, Matsumoto A, Inahashi Y, Duangmal K, Takahashi Y	Int J Syst Evol Microbiol	10.1099/ijs.0.022509-0	2010
Phylogeny	Transfer of Actinomadura spadix Nonomura and Ohara 1971 to Actinoallomurus spadix gen. nov., comb. nov., and description of Actinoallomurus amamiensis sp. nov., Actinoallomurus caesius sp. nov., Actinoallomurus coprocola sp. nov., Actinoallomurus fulvus sp. nov., Actinoallomurus iriomotensis sp. nov., Actinoallomurus luridus sp. nov., Actinoallomurus purpureus sp. nov. and Actinoallomurus yoronensis sp. nov.	Tamura T, Ishida Y, Nozawa Y, Otoguro M, Suzuki K	Int J Syst Evol Microbiol	10.1099/ijs.0.006858-0	2009

References

#16835	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45450
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25553	IJSEM 1867 2009 ( DOI 10.1099/ijs.0.006858-0 , PubMed 19567582 )
#29127	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25553
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinoallomurus coprocola (DSM 45450, KCTC 19542, NBRC 103688)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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