Name: Hominisplanchenecus murintestinalis NM72_1-8
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169766

Type strain:

Species: Hominisplanchenecus murintestinalis

Strain Designation: NM72_1-8, NM72, 1-8

Culture col. no.: DSM 110165

Strain history: <- W. Navarre, Toronto; NM72_1-8

NCBI tax ID(s): 2941517 (species)

Special Collections

Section

Hominisplanchenecus murintestinalis NM72_1-8 is an anaerobe, Gram-positive bacterium that was isolated from caecal/colon content; C57BL/6, APCmin/+ Msh2+/-, 9-week-old mouse.

Gram-positive
anaerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Lachnospiraceae*
	Genus	*Hominisplanchenecus*
	Species	"Hominisplanchenecus murintestinalis"
	Full Scientific Name (LPSN)	Hominisplanchenecus murintestinalis Afrizal et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69185]

Culture medium

GAM Broth, modified (Gifu Anaerobic Medium Broth, modified) (DSMZ Medium 1715)

[Ref.: #69185]

Culture medium growth

[Ref.: #69185]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69185]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %93.393

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69185]	Sample type/isolated from	caecal/colon content; C57BL/6, APCmin/+ Msh2+/-, 9-week-old mouse
[Ref.: #69185]	Geographic location (country and/or sea, region)	Toronto
[Ref.: #69185]	Country	Canada
[Ref.: #69185]	Country ISO 3 Code	CAN
[Ref.: #69185]	Continent	North America
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Hominisplanchenecus murintestinalis NM72_1-8	GCA_004793585	contig	GenBank ENA	2941517 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Hominisplanchenecus murintestinalis NM72_1-8 NCBI: GCA_004793585.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	74.336	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	93.393	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.877	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	53.456	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.151	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	53.5	no

Availability in culture collections External links

[Ref.: #69185]

Culture collection no.

DSM 110165

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69185

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110165

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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