Name: Spirillospora albida UNCC 1030
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16916

Type strain:

Species: Spirillospora albida

Strain Designation: UNCC 1030

Culture col. no.: DSM 43034, ATCC 15331, CBS 291.64, IFO 12248, KCC A-0041, NBRC 12248, JCM 3041, BCRC 13427, IFM 1140, IMET 9031, IMSNU 20128, KACC 20036, KCTC 9179, KCTC 9488, NCIMB 13270, NRRL B-3350, VKM Ac-670, VKM Ac-926

Strain history: KCC A-0041 <-- H. A. Lechevalier <-- ATCC 15331 <-- J. N. Couch UNCC 1030 <-- A. Nielsen.

NCBI tax ID(s): 58123 (species)

SI-ID 297044

ATCC 15331, DSM 43034, IFO 12248, JCM 3041, CCRC 13427, IMET 9031, NCIMB 13270, NRRL B-3350, VKM Ac-926, VKM Ac-670, CBS 291.64, KCTC 9179, KCTC 9488, NBRC 12248, BCRC 13427, KACC 20036

Other strains from Spirillospora albida

S. albida 312, MB-T 30, DSM 43809, ATCC 14541, ...

Section

Spirillospora albida UNCC 1030 is a spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Spirillospora*
	Species	**Spirillospora albida**
	Full Scientific Name (LPSN)	Spirillospora albida Couch 1963 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 2

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 3

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 4

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 5

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 6

[Ref.: #19928]	Colony color	Beige (1001)
[Ref.: #19928]	Incubation period	10-14 days
[Ref.: #19928]	Cultivation medium used	ISP 7

[Ref.: #19928]	Multicellular complex forming ability	yes
[Ref.: #19928]	Multicellular complex name	Aerial Mycelium
[Ref.: #19928]	Multicellular complex color	White
[Ref.: #19928]	Medium Name (multicellularity)	ISP 2

[Ref.: #19928]	Multicellular complex forming ability	yes
[Ref.: #19928]	Multicellular complex name	Aerial Mycelium
[Ref.: #19928]	Multicellular complex color	White
[Ref.: #19928]	Medium Name (multicellularity)	ISP 3

[Ref.: #19928]	Multicellular complex forming ability	yes
[Ref.: #19928]	Multicellular complex name	Aerial Mycelium
[Ref.: #19928]	Multicellular complex color	White
[Ref.: #19928]	Medium Name (multicellularity)	ISP 4

[Ref.: #19928]	Multicellular complex forming ability	yes
[Ref.: #19928]	Multicellular complex name	Aerial Mycelium
[Ref.: #19928]	Multicellular complex color	White
[Ref.: #19928]	Medium Name (multicellularity)	ISP 5

[Ref.: #19928]	Multicellular complex forming ability	no
[Ref.: #19928]	Medium Name (multicellularity)	ISP 6

[Ref.: #19928]	Multicellular complex forming ability	yes
[Ref.: #19928]	Multicellular complex name	Aerial Mycelium
[Ref.: #19928]	Multicellular complex color	White
[Ref.: #19928]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium

ISP 3

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Culture medium

ISP 4

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Culture medium

ISP 5

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Culture medium

ISP 6

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Culture medium

ISP 7

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Culture medium

BHI MEDIUM (DSMZ Medium 215)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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		Temperature
[Ref.: #10704]	growth	28 °C
[Ref.: #19928]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #10704]	Temperature range	mesophilic
[Ref.: #19928]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19928]	Spore description	Formation of sporangia, spore surface smooth
[Ref.: #19928]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19928]		NaCl		maximum	2.5	%

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Observation

quinones: MK-9(H₆), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19928]	arabinose ChEBI	+/-
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19928]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #19928]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19928]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #19928]	mannitol ChEBI	+
[Ref.: #19928]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #19928]	raffinose ChEBI	-
[Ref.: #19928]	rhamnose ChEBI	-
[Ref.: #19928]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19928]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19928]	538	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10704]	Sample type/isolated from	soil
[Ref.: #10704]	Country	USA
[Ref.: #10704]	Country ISO 3 Code	USA
[Ref.: #10704]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Soil, cow pasture
[Ref.: #67770]	Geographic location (country and/or sea, region)	NC
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence D85498 (>99% sequence identity) for Actinomadura from Microbeatlas

Aquatic Samples	3
Soil Samples	124
Animal Samples	4
Plant Samples	1
Total Samples	132

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10704]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19928]	Biosafety level	1	German classification

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Spirillospora albida gene for 16S ribosomal RNA, partial sequence	D85498	1476	ENA	58123 tax ID	*
[Ref.: #20218]	Spirillospora albida 16S-23S ribosomal RNA intergenic spacer region, partial sequence	AF134111	498	ENA	58123 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Spirillospora albida NRRL B-3350	GCA_000718255	contig	GenBank	58123 tax ID

[Ref.: #67770]	GC-content	72.9 mol%
[Ref.: #67770]	GC-content	72.6 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Spirillospora albida NRRL B-3350 NCBI: GCA_000718255.1
[Ref.: #69480]	motile	yes	57.931	no
[Ref.: #69480]	flagellated	no	92.002	no
[Ref.: #69480]	gram-positive	yes	90.086	no
[Ref.: #69480]	anaerobic	no	97.615	no
[Ref.: #69480]	halophile	no	95.655	no
[Ref.: #69480]	spore-forming	yes	89.163	no
[Ref.: #69480]	thermophile	no	93.898	yes
[Ref.: #69480]	glucose-util	yes	89.962	no
[Ref.: #69480]	aerobic	yes	80.855	no
[Ref.: #69480]	glucose-ferment	no	91.503	no

Availability in culture collections External links

[Ref.: #10704]

Culture collection no.

DSM 43034, ATCC 15331, CBS 291.64, IFO 12248, KCC A-0041, NBRC 12248, JCM 3041, BCRC 13427, IFM 1140, IMET 9031, IMSNU 20128, KACC 20036, KCTC 9179, KCTC 9488, NCIMB 13270, NRRL B-3350, VKM Ac-670, VKM Ac-926

[Ref.: #85921]

SI-ID 297044

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Spirillospora tritici sp. nov., a Novel Actinomycete Isolated from Rhizosphere Soil of Triticum aestivum L.	Song J, Wang J, Sun T, Li C, He H, Shi L, Guo X, Zhao J, Xiang W	Curr Microbiol	10.1007/s00284-018-1548-3	2018	*

References

#10704

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43034

#19928

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85921

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297044.1 )

* These data were automatically processed and therefore are not curated

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Spirillospora albida NRRL B-3350

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