Name: Actinocorallia aurea DSM 44434
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16915

Type strain:

Species: Actinocorallia aurea

Culture col. no.: DSM 44434, IAM 1540H3, IFO 14752, JCM 16895, NBRC 14752, CIP 109708

Strain history: DSM 44434 <-- IFO 14752 <-- A. Shimazu 1540-H3.

NCBI tax ID(s): 65511 (species)

SI-ID 88088

IFO14752, DSM 44434, NBRC 14752, JCM 16895

Special Collections

Other strains from Actinocorallia aurea

Section

Actinocorallia aurea DSM 44434 is a bacterium that builds an aerial mycelium and was isolated from soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinocorallia*
	Species	**Actinocorallia aurea**
	Full Scientific Name (LPSN)	Actinocorallia aurea Tamura et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 2

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 3

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 4

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 5

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 6

[Ref.: #19863]	Colony color	Cream
[Ref.: #19863]	Incubation period	10-14 days
[Ref.: #19863]	Cultivation medium used	ISP 7

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 2

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 3

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 4

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 5

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 6

[Ref.: #19863]	Multicellular complex forming ability	yes
[Ref.: #19863]	Multicellular complex name	Aerial Mycelium
[Ref.: #19863]	Multicellular complex color	Sand yellow (1002)
[Ref.: #19863]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11745]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #11745]

Culture medium growth

[Ref.: #11745]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11745]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 2

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 3

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 4

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 5

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 6

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

[Ref.: #19863]

Culture medium

ISP 7

[Ref.: #19863]

Culture medium growth

[Ref.: #19863]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #11745]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-9(H₆), MK-9(H₈)

	Metabolite	Utilization activity
[Ref.: #19863]	arabinose ChEBI	+
[Ref.: #19863]	cellulose ChEBI	+
[Ref.: #19863]	fructose ChEBI	+
[Ref.: #19863]	glucose ChEBI	+
[Ref.: #19863]	mannitol ChEBI	+
[Ref.: #19863]	myo-inositol ChEBI	+
[Ref.: #19863]	raffinose ChEBI	+
[Ref.: #19863]	rhamnose ChEBI	+
[Ref.: #19863]	sucrose ChEBI	+
[Ref.: #19863]	xylose ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19863]	675	not determinedn.d.	-	+	+	-	+	+	-	-	-	-	+	-	-	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11745]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Iwate Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB006177 (>99% sequence identity) for Actinocorallia aurea from Microbeatlas

Aquatic Samples	3
Soil Samples	42
Animal Samples	4
Plant Samples	24
Total Samples	73

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11745]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19863]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11745]	Actinocorallia aurea gene for 16S ribosomal RNA, partial sequence, strain: NBRC 14752 (= IFO 14752)	AB006177	1465	GenBank ENA	65511 tax ID

[Ref.: #11745]	GC-content	71.6 mol%
[Ref.: #67770]	GC-content	71.6 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #11745]

Culture collection no.

DSM 44434, IAM 1540H3, IFO 14752, JCM 16895, NBRC 14752, CIP 109708

[Ref.: #85920]

SI-ID 88088

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Trebonia kvetii gen. nov., sp. nov., an acidophilic actinobacterium, and proposal of the new actinobacterial family Treboniaceae fam. nov.	Rapoport D, Sagova-Mareckova M, Sedlacek I, Provaznik J, Kralova S, Pavlinic D, Benes V, Kopecky J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004388	2020	*
Phylogeny	Classification of 'Sarraceniospora aurea' Furihata et al. 1989 as Actinocorallia aurea sp. nov.	Tamura T, Hatano K, Suzuki KI	Int J Syst Evol Microbiol	10.1099/ijs.0.64008-0	2007	*

References

#11745

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44434

#19863

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85920

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID88088.1 )

* These data were automatically processed and therefore are not curated

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