Cite this strain

Pseudomonas fragi (JCM 5380)

Name: Pseudomonas fragi (JCM 5380)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 165164

Type strain

Culture col. no. JCM 5380

NCBI tax ID(s) 296

Special Collections JCM

History P.-P. Chang 19.

Links

Pseudomonas fragi JCM 5380 is a bacterium that was isolated from Beef.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 133160

JCM 5380

@ref 20215

Last LPSN update 2026-02-09 11:40:01

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas fragi

Full scientific name Pseudomonas fragi (Eichholz 1902) Gruber 1905 (Approved Lists 1980)

Synonyms (1)

"Bacterium fragi"

BacDive ID	Other strains from **Pseudomonas fragi** (118)	Type strain
12861	P. fragi DSM 3456, ATCC 4973, NRRL B-25, WDCM 00116, ... (type strain)
100178	P. fragi STI09548(IMET), AzIV, IMET 09689
100179	P. fragi STI09555(IMET), T-V,
134761	P. fragi 1CH6, CIP 60.46, LMG 5919
137113	P. fragi 1CH7, CIP 60.47, LMG 5920
137114	P. fragi 16E, CIP 60.48
137115	P. fragi 20M, CIP 60.49
141185	P. fragi CCUG 45
141197	P. fragi CCUG 159
141368	P. fragi CCUG 1206
141465	P. fragi CCUG 2073, NRRL B-2397
143369	P. fragi CCUG 18759
145762	P. fragi CCUG 29524
154673	P. fragi CCUG 54802
155995	P. fragi CCUG 59953
155996	P. fragi CCUG 59954
157806	P. fragi S117, DSM 108137
162817	P. fragi JCM 20237, IAM 1650, IFO 12049, NBRC 12049
165146	P. fragi JCM 5362
165147	P. fragi JCM 5363
165148	P. fragi JCM 5364
165149	P. fragi JCM 5365
165150	P. fragi JCM 5366
165151	P. fragi JCM 5367
165152	P. fragi JCM 5368
165153	P. fragi JCM 5369
165154	P. fragi JCM 5370
165155	P. fragi JCM 5371
165156	P. fragi JCM 5372
165157	P. fragi JCM 5373
165158	P. fragi JCM 5374
165159	P. fragi JCM 5375
165160	P. fragi JCM 5376
165161	P. fragi JCM 5377
165162	P. fragi JCM 5378
165163	P. fragi JCM 5379
165165	P. fragi JCM 5382
165166	P. fragi JCM 5383
165167	P. fragi JCM 5384
165168	P. fragi JCM 5385
165169	P. fragi JCM 5386
165170	P. fragi JCM 5387
165171	P. fragi JCM 5388
165172	P. fragi JCM 5389
165173	P. fragi JCM 5390
165174	P. fragi JCM 5391
165175	P. fragi JCM 5392
165176	P. fragi JCM 5393
165177	P. fragi JCM 5394
165178	P. fragi JCM 5395
165179	P. fragi JCM 5396
165180	P. fragi JCM 5397
165181	P. fragi JCM 5398
165182	P. fragi JCM 5399
165183	P. fragi JCM 5400
165184	P. fragi JCM 5401
165185	P. fragi JCM 5402
165186	P. fragi JCM 5403
165187	P. fragi JCM 5404
165190	P. fragi JCM 5407
165191	P. fragi JCM 5408
165192	P. fragi JCM 5409
165193	P. fragi JCM 5410
165194	P. fragi JCM 5411
165195	P. fragi JCM 5412
165196	P. fragi JCM 5413
165197	P. fragi JCM 5414
165199	P. fragi JCM 5417
165200	P. fragi JCM 5418
165201	P. fragi JCM 5419
165202	P. fragi JCM 5420
165203	P. fragi JCM 5421
165204	P. fragi JCM 5422
165205	P. fragi JCM 5423
165206	P. fragi JCM 5425
165207	P. fragi JCM 5426
165208	P. fragi JCM 5427
165209	P. fragi JCM 5428
165210	P. fragi JCM 5429
165211	P. fragi JCM 5430
165212	P. fragi JCM 5431
165213	P. fragi JCM 5432
165214	P. fragi JCM 5433
165215	P. fragi JCM 5434
165216	P. fragi JCM 5435
165217	P. fragi JCM 5436
165218	P. fragi JCM 5437
165219	P. fragi JCM 5438
165221	P. fragi JCM 5440
165222	P. fragi JCM 5441
165223	P. fragi JCM 5442
165224	P. fragi JCM 5444
165225	P. fragi JCM 5445
165226	P. fragi JCM 5446
165227	P. fragi JCM 5447
165228	P. fragi JCM 5448
165229	P. fragi JCM 5449
165230	P. fragi JCM 5451
165231	P. fragi JCM 5452
165232	P. fragi JCM 5453
165233	P. fragi JCM 5454
165235	P. fragi JCM 5456
165236	P. fragi JCM 5457
165237	P. fragi JCM 5460
165238	P. fragi JCM 5461
165239	P. fragi JCM 5462
165241	P. fragi JCM 5464
165243	P. fragi JCM 5467
165244	P. fragi JCM 5468
165245	P. fragi JCM 5469
165248	P. fragi JCM 5472
165249	P. fragi JCM 5473
165250	P. fragi JCM 5474
165251	P. fragi JCM 5475
165252	P. fragi JCM 5476
165253	P. fragi JCM 5477
165254	P. fragi JCM 5479
165258	P. fragi JCM 5483

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeBeef

Taxonmaps

69479

Global distribution of 16S sequence AB685594 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	830
Soil Samples	460
Animal Samples	1081
Plant Samples	571
Total Samples	2942

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pseudomonas fragi gene for 16S ribosomal RNA, partial sequence, strain: JCM 5380	AB685594	1459		296

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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