Name: Thermococcus indicus JCM 39077
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 164867

Type strain:

Species: Thermococcus indicus

Culture col. no.: JCM 39077, KCTC 15844

Strain history: J.-A. Yang; Korea Inst. of Ocean Sci. & Technol. South Korea; IOH1.

NCBI tax ID(s): 2586643 (species)

Special Collections

JCM
KCTC

Section

Thermococcus indicus JCM 39077 is an archaeon that was isolated from Deep-sea hydrothermal vent area in the Central Indian Ocean redge.

16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Thermococci*
	Order	*Thermococcales*
	Family	*Thermococcaceae*
	Genus	*Thermococcus*
	Species	**Thermococcus indicus**
	Full Scientific Name (LPSN)	Thermococcus indicus Lim et al. 2021

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	80 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Deep-sea hydrothermal vent (Onnuri Vent Field) area in the Central Indian Ocean redge
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Thermococcus indicus 16S ribosomal RNA gene, partial sequence	MN065571	1414	GenBank ENA	2586643 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Thermococcus indicus IOH1	GCA_006274605	complete	GenBank ENA	2586643 tax ID

[Ref.: #67770]

GC-content

54.9 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 39077, KCTC 15844

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermococcus indicus sp. nov., a Fe(III)-reducing hyperthermophilic archaeon isolated from the Onnuri Vent Field of the Central Indian Ocean ridge.	Lim JK, Kim YJ, Yang JA, Namirimu T, Yang SH, Park MJ, Kwon YM, Lee HS, Kang SG, Lee JH, Kwon KK	J Microbiol	10.1007/s12275-020-9424-9	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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