Aeromicrobium terrae (BCRC 81217, JCM 33499)

Name: Aeromicrobium terrae (BCRC 81217, JCM 33499)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164590

Type strain

Culture col. no. BCRC 81217 JCM 33499

NCBI tax ID(s) 2498846

Special Collections JCM

History JCM <-- C.-C. Young; Natl. Chung Hsing Univ., Taiwan; CC-CFT486.

Links

Aeromicrobium terrae JCM 33499 is a bacterium that was isolated from Rhizosphere soil of a maize field in Yunlin County.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 25187

BCRC 81217,JCM 33499

@ref 20215

Last LPSN update 2026-05-29 08:45:27

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Nocardioidaceae

Genus Aeromicrobium

Species Aeromicrobium terrae

Full scientific name Aeromicrobium terrae Lin et al. 2021

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	91.81
125438		90.5
125439	positive	94.016

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.175

Observation

67770

Observationquinones: MK-9

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Rhizosphere soil (2 mm distance from the root) of a maize field in Yunlin County	Taiwan, Province of China	TWN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM803956v1 assembly for Aeromicrobium terrae CC-CFT486	contig	GCA_008039565	2498846.4	2894862180	2498846	75.69

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Aeromicrobium terrae strain CC-CFT486 16S ribosomal RNA gene, partial sequence	MK335892	1443		2498846

GC content

@ref	GC-content (mol%)	Method
67770	70.6	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM803956v1 assembly for Aeromicrobium terrae CC-CFT486
NCBI: GCA_008039565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.18	no
125439	gram_stain	BacteriaNetⓘ	positive	94.02	no
125439	spore_formation	BacteriaNetⓘ	no	89.76	no
125439	motility	BacteriaNetⓘ	no	60.87	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aeromicrobium terrae CC-CFT486
NCBI: GCA_008039565.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.81	no
125438	anaerobic	anaerobicⓘ	no	93.71	no
125438	aerobic	aerobicⓘ	yes	89.18	no
125438	spore-forming	spore-formingⓘ	no	72.47	no
125438	thermophilic	thermophileⓘ	no	89.59	yes
125438	flagellated	motile2+ⓘ	no	90.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aeromicrobium terrae sp. nov., isolated from a maize field.	Lin SY, Tsai CF, Hameed A, Young CC	Int J Syst Evol Microbiol	10.1099/ijsem.0.004616	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

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Aeromicrobium terrae (BCRC 81217, JCM 33499)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_008039565

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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