"Candidatus Chloracidobacterium thermophilum" JCM 30199 is a thermophilic prokaryote that was isolated from Phototrophic microbial mat community located in the effluent channel of Octopus Spring in the Lower Geyser Basin of Yellowstone National Park.
thermophilic genome sequence| @ref 20215 |
Last LPSN update
2026-02-09 11:39:41 |
| Domain Bacteria |
| Phylum Acidobacteriota |
| Class Terriglobia |
| Order Terriglobales |
| Family Acidobacteriaceae |
| Genus "Candidatus Chloracidobacterium" |
| Species "Candidatus Chloracidobacterium thermophilum" |
| Full scientific name Candidatus Chloracidobacterium thermophilum Bryant et al. 2007 |
| Synonyms (1) |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 67770 | Phototrophic microbial mat community located in the effluent channel of Octopus Spring in the Lower Geyser Basin of Yellowstone National Park | WY | USA | USA | North America |
Global distribution of 16S sequence CP002514 (>99% sequence identity) for Chloracidobacterium thermophilum subclade from Microbeatlas 
 Aquatic Samples |
56 |
 Soil Samples |
4 |
 Animal Samples |
2 |
 Plant Samples |
|
| Total Samples | 62 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM22629v1 assembly for Chloracidobacterium thermophilum B | complete | GCA_000226295   | 981222.3  | 2512047033  | 981222 | 89.57 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 61.3 | genome sequence analysis |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Structure of the Acidobacteria homodimeric reaction center bound with cytochrome c. | Dong S, Huang G, Wang C, Wang J, Sui SF, Qin X. | Nat Commun | 10.1038/s41467-022-35460-6 | 2022 |  | |
| Genetics | Pheno- and Genotyping of Hopanoid Production in Acidobacteria. | Damste JSS, Rijpstra WIC, Dedysh SN, Foesel BU, Villanueva L. | Front Microbiol | 10.3389/fmicb.2017.00968 | 2017 | |
| Defining Factors that Influence the Stability of Tetrameric EgtB from Chloracidobacterium thermophilum: From pH Modulation to Affinity Tag Retention. | Rodriguez KW, Meier KK. | Biochemistry | 10.1021/acs.biochem.5c00123 | 2025 | | |
| Efficient production of Ergothioneine via an optimized allogenous assembly of the ERG synthesis pathway in Escherichia coli BL21 | Li L, Xu S, Jiang Y. | Journal of Biotechnology. | 2025 | | ||
| Association of As(III) Methyltransferases and Radical S-Adenosylmethionine Enzymes. | Chen J, Viswanathan T, Rosen BP. | Environ Sci Technol | 10.1021/acs.est.5c05830 | 2025 | | |
| Efficient production of Ergothioneine via an optimized allogenous assembly of the ERG synthesis pathway in Escherichia coli BL21. | Li L, Xu S, Jiang Y. | J Biotechnol | 10.1016/j.jbiotec.2025.06.009 | 2025 | | |
| Identification of small molecule inhibitors of the Chloracidobacterium thermophilum type IV pilus protein PilB by ensemble virtual screening. | McDonald-Ramos JS, Hicklin IK, Yang Z, Brown AM. | Arch Biochem Biophys | 10.1016/j.abb.2024.110127 | 2024 | | |
| A quantitative assessment of (bacterio)chlorophyll assignments in the cryo-EM structure of the Chloracidobacterium thermophilum reaction center. | Gisriel CJ, Flesher DA, Long Z, Liu J, Wang J, Bryant DA, Batista VS, Brudvig GW. | Photosynth Res | 10.1007/s11120-023-01047-5 | 2024 | | |
| Two-dimensional 67Zn HYSCORE spectroscopy reveals that a Zn-bacteriochlorophyll aP' dimer is the primary donor (P840) in the type-1 reaction centers of Chloracidobacterium thermophilum. | Charles P, Kalendra V, He Z, Khatami MH, Golbeck JH, van der Est A, Lakshmi KV, Bryant DA. | Phys Chem Chem Phys | 10.1039/c9cp06556c | 2020 | | |
| Metabolism | An Alternative Active Site Architecture for O2 Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum. | Stampfli AR, Goncharenko KV, Meury M, Dubey BN, Schirmer T, Seebeck FP. | J Am Chem Soc | 10.1021/jacs.8b13023 | 2019 | |
| Metabolism | Reaction centers of the thermophilic microaerophile, Chloracidobacterium thermophilum (Acidobacteria) I: biochemical and biophysical characterization. | He Z, Ferlez B, Kurashov V, Tank M, Golbeck JH, Bryant DA. | Photosynth Res | 10.1007/s11120-019-00650-9 | 2019 | |
| Enzymology | Selenocysteine as a Substrate, an Inhibitor and a Mechanistic Probe for Bacterial and Fungal Iron-Dependent Sulfoxide Synthases. | Goncharenko KV, Fluckiger S, Liao C, Lim D, Stampfli AR, Seebeck FP. | Chemistry | 10.1002/chem.201903898 | 2020 | |
| The synergy between the PscC subunits for electron transfer to the P840 special pair in Chlorobaculum tepidum. | Lyratzakis A, Daskalakis V, Xie H, Tsiotis G. | Photosynth Res | 10.1007/s11120-024-01093-7 | 2024 | | |
| Discovery of Two Inhibitors of the Type IV Pilus Assembly ATPase PilB as Potential Antivirulence Compounds. | Dye KJ, Vogelaar NJ, O'Hara M, Sobrado P, Santos W, Carlier PR, Yang Z. | Microbiol Spectr | 10.1128/spectrum.03877-22 | 2022 | | |
| Metabolism | 15N photo-CIDNP MAS NMR analysis of reaction centers of Chloracidobacterium thermophilum. | Zill JC, He Z, Tank M, Ferlez BH, Canniffe DP, Lahav Y, Bellstedt P, Alia A, Schapiro I, Golbeck JH, Bryant DA, Matysik J. | Photosynth Res | 10.1007/s11120-018-0504-1 | 2018 | |
| A Phage-Based Approach to Identify Antivirulence Inhibitors of Bacterial Type IV Pili. | Shimozono TM, Vogelaar NJ, O'Hara MT, Yang Z. | Microb Biotechnol | 10.1111/1751-7915.70081 | 2025 | | |
| Metabolism | The type IV pilus assembly motor PilB is a robust hexameric ATPase with complex kinetics. | Sukmana A, Yang Z. | Biochem J | 10.1042/bcj20180167 | 2018 | |
| Metabolism | Directed Evolution of a Halide Methyltransferase Enables Biocatalytic Synthesis of Diverse SAM Analogs. | Tang Q, Grathwol CW, Aslan-Uzel AS, Wu S, Link A, Pavlidis IV, Badenhorst CPS, Bornscheuer UT. | Angew Chem Int Ed Engl | 10.1002/anie.202013871 | 2021 | |
| Genetics | Genomic and Phenotypic Characterization of Chloracidobacterium Isolates Provides Evidence for Multiple Species. | Saini MK, Sebastian A, Shirotori Y, Soulier NT, Garcia Costas AM, Drautz-Moses DI, Schuster SC, Albert I, Haruta S, Hanada S, Thiel V, Tank M, Bryant DA. | Front Microbiol | 10.3389/fmicb.2021.704168 | 2021 | |
| Enzymology | In vitro enzymatic assays of photosynthetic bacterial 3-vinyl hydratases for bacteriochlorophyll biosyntheses. | Teramura M, Harada J, Tamiaki H. | Photosynth Res | 10.1007/s11120-017-0415-6 | 2018 | |
| Draft Genome Sequence of Chloracidobacterium sp. CP2_5A, a Phototrophic Member of the Phylum Acidobacteria Recovered from a Japanese Hot Spring. | Ward LM, McGlynn SE, Fischer WW. | Genome Announc | 10.1128/genomea.00821-17 | 2017 | | |
| Metabolism | Substrate Profiling of Anion Methyltransferases for Promiscuous Synthesis of S-Adenosylmethionine Analogs from Haloalkanes. | Schulke KH, Ospina F, Hornschemeyer K, Gergel S, Hammer SC. | Chembiochem | 10.1002/cbic.202100632 | 2022 | |
| Draft Genome Sequence of the Photoheterotrophic Chloracidobacterium thermophilum Strain OC1 Found in a Mat at Ojo Caliente. | Hallenbeck PC, Grogger M, Mraz M, Veverka D. | Genome Announc | 10.1128/genomea.01570-15 | 2016 | | |
| Biocatalytic C3-Indole Methylation-A Useful Tool for the Natural-Product-Inspired Stereoselective Synthesis of Pyrroloindoles. | Schneider P, Henssen B, Paschold B, Chapple BP, Schatton M, Seebeck FP, Classen T, Pietruszka J. | Angew Chem Int Ed Engl | 10.1002/anie.202107619 | 2021 | | |
| The structural basis for high-affinity c-di-GMP binding to the GSPII-B domain of the traffic ATPase PilF from Thermus thermophilus. | Neissner K, Keller H, Kirchner L, Dusterhus S, Duchardt-Ferner E, Averhoff B, Wohnert J. | J Biol Chem | 10.1016/j.jbc.2024.108041 | 2025 | | |
| Draft Genome Sequence of Anoxybacillusayderensis Strain MT-Cab (Firmicutes). | Thiel V, Tank M, Tomsho LP, Burhans R, Gay SE, Hamilton TL, Schuster SC, Bryant DA. | Genome Announc | 10.1128/genomea.00547-17 | 2017 | | |
| An S=1 Iron(IV) Intermediate Revealed in a Non-Heme Iron Enzyme-Catalyzed Oxidative C-S Bond Formation. | Paris JC, Hu S, Wen A, Weitz AC, Cheng R, Gee LB, Tang Y, Kim H, Vegas A, Chang WC, Elliott SJ, Liu P, Guo Y. | Angew Chem Int Ed Engl | 10.1002/anie.202309362 | 2023 | | |
| Application of the C3-Methyltransferase StspM1 for the Synthesis of the Natural Pyrroloindole Motif. | Haase M, David B, Paschold B, Classen T, Schneider P, Pozhydaieva N, Gohlke H, Pietruszka J. | ACS Catal | 10.1021/acscatal.3c04952 | 2024 | | |
| Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA. | Ireland KA, Kayrouz CM, Abbott ML, Seyedsayamdost MR, Davis KM. | Structure | 10.1016/j.str.2024.08.006 | 2024 | | |
| Energetic Diversity in the Electron-Transfer Pathways of Type I Photosynthetic Reaction Centers. | Kanda T, Ishikita H. | Biochemistry | 10.1021/acs.biochem.2c00689 | 2023 | | |
| Crystal Structure of the Ergothioneine Sulfoxide Synthase from Candidatus Chloracidobacterium thermophilum and Structure-Guided Engineering To Modulate Its Substrate Selectivity. | Naowarojna N, Irani S, Hu W, Cheng R, Zhang L, Li X, Chen J, Zhang YJ, Liu P. | ACS Catal | 10.1021/acscatal.9b02054 | 2019 | | |
| Phylogeny | Novel isolates double the number of chemotrophic species and allow the first description of higher taxa in Acidobacteria subdivision 4. | Pascual J, Wust PK, Geppert A, Foesel BU, Huber KJ, Overmann J. | Syst Appl Microbiol | 10.1016/j.syapm.2015.08.001 | 2015 | |
| Biochemical and Structural Characterization of OvoATh2: A Mononuclear Nonheme Iron Enzyme from Hydrogenimonas thermophila for Ovothiol Biosynthesis. | Wang X, Hu S, Wang J, Zhang T, Ye K, Wen A, Zhu G, Vegas A, Zhang L, Yan W, Liu X, Liu P. | ACS Catal | 10.1021/acscatal.3c04026 | 2023 | | |
| Genetics | Complete genome of Candidatus Chloracidobacterium thermophilum, a chlorophyll-based photoheterotroph belonging to the phylum Acidobacteria. | Garcia Costas AM, Liu Z, Tomsho LP, Schuster SC, Ward DM, Bryant DA. | Environ Microbiol | 10.1111/j.1462-2920.2011.02592.x | 2012 | |
| Green Bacteria: Insights into Green Bacterial Evolution through Genomic Analyses | Bryant DA, Liu Z. | Adv Bot Res | 10.1016/b978-0-12-397923-0.00004-7 | 2013 | | |
| Myxococcus xanthus PilB interacts with c-di-GMP and modulates motility and biofilm formation. | Dye KJ, Salar S, Allen U, Smith W, Yang Z. | J Bacteriol | 10.1128/jb.00221-23 | 2023 | | |
| Genetics | Integrating multi-platform assembly to recover MAGs from hot spring biofilms: insights into microbial diversity, biofilm formation, and carbohydrate degradation. | Liew KJ, Shahar S, Shamsir MS, Shaharuddin NB, Liang CH, Chan KG, Pointing SB, Sani RK, Goh KM. | Environ Microbiome | 10.1186/s40793-024-00572-7 | 2024 | |
| Metabolism | Characterization of the FMO protein from the aerobic chlorophototroph, Candidatus Chloracidobacterium thermophilum. | Tsukatani Y, Wen J, Blankenship RE, Bryant DA. | Photosynth Res | 10.1007/s11120-009-9517-0 | 2010 | |
| Ether- and ester-bound iso-diabolic acid and other lipids in members of acidobacteria subdivision 4. | Sinninghe Damste JS, Rijpstra WI, Hopmans EC, Foesel BU, Wust PK, Overmann J, Tank M, Bryant DA, Dunfield PF, Houghton K, Stott MB. | Appl Environ Microbiol | 10.1128/aem.01066-14 | 2014 | | |
| Metabolism | The bound iron-sulfur clusters of type-I homodimeric reaction centers. | Romberger SP, Golbeck JH. | Photosynth Res | 10.1007/s11120-010-9543-y | 2010 | |
| Metabolism | Phototrophic phylotypes dominate mesothermal microbial mats associated with hot springs in Yellowstone National Park. | Ross KA, Feazel LM, Robertson CE, Fathepure BZ, Wright KE, Turk-Macleod RM, Chan MM, Held NL, Spear JR, Pace NR. | Microb Ecol | 10.1007/s00248-012-0012-3 | 2012 | |
| Mucosal microbiome associates with progression to gastric cancer. | Png CW, Lee WJJ, Chua SJ, Zhu F, Gastric Consortium5, Yeoh KG, Zhang Y. | Theranostics | 10.7150/thno.65302 | 2022 | | |
| Phylogeny | Crop rotation reduces the frequency of anaerobic soil bacteria in Red Latosol of Brazil. | Cezar RM, Vezzani FM, Kaschuk G, Balsanelli E, de Souza EM, Vargas LK, Molin R. | Braz J Microbiol | 10.1007/s42770-021-00578-0 | 2021 | |
| Proteomic Time-Course Analysis of the Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus aurantiacus, during the Transition from Respiration to Phototrophy. | Kawai S, Shimamura S, Shimane Y, Tsukatani Y. | Microorganisms | 10.3390/microorganisms10071288 | 2022 | | |
| Phylogeny | Candidatus Chloracidobacterium thermophilum: an aerobic phototrophic Acidobacterium. | Bryant DA, Costas AM, Maresca JA, Chew AG, Klatt CG, Bateson MM, Tallon LJ, Hostetler J, Nelson WC, Heidelberg JF, Ward DM. | Science | 10.1126/science.1143236 | 2007 | |
| Identification of the bacteriochlorophylls, carotenoids, quinones, lipids, and hopanoids of "Candidatus Chloracidobacterium thermophilum". | Garcia Costas AM, Tsukatani Y, Rijpstra WI, Schouten S, Welander PV, Summons RE, Bryant DA. | J Bacteriol | 10.1128/jb.06421-11 | 2012 | | |
| Metabolism | Ultrastructural analysis and identification of envelope proteins of "Candidatus Chloracidobacterium thermophilum" chlorosomes. | Garcia Costas AM, Tsukatani Y, Romberger SP, Oostergetel GT, Boekema EJ, Golbeck JH, Bryant DA. | J Bacteriol | 10.1128/jb.06124-11 | 2011 | |
| Genetics | Coloring in the tree of life. | Raymond J. | Trends Microbiol | 10.1016/j.tim.2007.11.003 | 2008 | |
| A Single Aspergillus fumigatus Gene Enables Ergothioneine Biosynthesis and Secretion by Saccharomyces cerevisiae. | Doyle S, Cuskelly DD, Conlon N, Fitzpatrick DA, Gilmartin CB, Dix SH, Jones GW. | Int J Mol Sci | 10.3390/ijms231810832 | 2022 | | |
| Enzymology | Cyclic-di-GMP and ADP bind to separate domains of PilB as mutual allosteric effectors. | Dye KJ, Yang Z. | Biochem J | 10.1042/bcj20190809 | 2020 | |
| Metabolism | Origin of Bacteriochlorophyll a and the Early Diversification of Photosynthesis. | Cardona T. | PLoS One | 10.1371/journal.pone.0151250 | 2016 | |
| Genetics | GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring. | Ruhl IA, Sheremet A, Furgason CC, Krause S, Bowers RM, Jarett JK, Tran TM, Grasby SE, Woyke T, Dunfield PF. | Front Microbiol | 10.3389/fmicb.2021.787651 | 2021 | |
| Pathogenicity | High-Throughput Screen for Inhibitors of the Type IV Pilus Assembly ATPase PilB. | Dye KJ, Vogelaar NJ, Sobrado P, Yang Z. | mSphere | 10.1128/msphere.00129-21 | 2021 | |
| OvoAMtht from Methyloversatilis thermotolerans ovothiol biosynthesis is a bifunction enzyme: thiol oxygenase and sulfoxide synthase activities. | Cheng R, Weitz AC, Paris J, Tang Y, Zhang J, Song H, Naowarojna N, Li K, Qiao L, Lopez J, Grinstaff MW, Zhang L, Guo Y, Elliott S, Liu P. | Chem Sci | 10.1039/d1sc05479a | 2022 | | |
| What We Are Learning from the Diverse Structures of the Homodimeric Type I Reaction Center-Photosystems of Anoxygenic Phototropic Bacteria. | Niederman RA. | Biomolecules | 10.3390/biom14030311 | 2024 | | |
| Phylogeny | Phylogeny of Anoxygenic Photosynthesis Based on Sequences of Photosynthetic Reaction Center Proteins and a Key Enzyme in Bacteriochlorophyll Biosynthesis, the Chlorophyllide Reductase. | Imhoff JF, Rahn T, Kunzel S, Neulinger SC. | Microorganisms | 10.3390/microorganisms7110576 | 2019 | |
| Genetics | Entirely Off-Grid and Solar-Powered DNA Sequencing of Microbial Communities during an Ice Cap Traverse Expedition. | Gowers GF, Vince O, Charles JH, Klarenberg I, Ellis T, Edwards A. | Genes (Basel) | 10.3390/genes10110902 | 2019 | |
| Metagenomic analysis of rhizosphere microbiome provides insights into occurrence of iron deficiency chlorosis in field of Asian pears. | Jia B, Chang X, Fu Y, Heng W, Ye Z, Liu P, Liu L, Al Shoffe Y, Watkins CB, Zhu L. | BMC Microbiol | 10.1186/s12866-021-02432-7 | 2022 | | |
| Nutrient requirements and growth physiology of the photoheterotrophic Acidobacterium, Chloracidobacterium thermophilum. | Tank M, Bryant DA. | Front Microbiol | 10.3389/fmicb.2015.00226 | 2015 | | |
| Chlorophyll biosynthesis gene evolution indicates photosystem gene duplication, not photosystem merger, at the origin of oxygenic photosynthesis. | Sousa FL, Shavit-Grievink L, Allen JF, Martin WF. | Genome Biol Evol | 10.1093/gbe/evs127 | 2013 | | |
| Diversity of thermophiles in a Malaysian hot spring determined using 16S rRNA and shotgun metagenome sequencing. | Chan CS, Chan KG, Tay YL, Chua YH, Goh KM. | Front Microbiol | 10.3389/fmicb.2015.00177 | 2015 | | |
| Metabolism | Golgi anti-apoptotic protein: a tale of camels, calcium, channels and cancer. | Carrara G, Parsons M, Saraiva N, Smith GL. | Open Biol | 10.1098/rsob.170045 | 2017 | |
| Enzymology | Microbial diversity analysis and screening for novel xylanase enzymes from the sediment of the Lobios Hot Spring in Spain. | Knapik K, Becerra M, Gonzalez-Siso MI. | Sci Rep | 10.1038/s41598-019-47637-z | 2019 | |
| Microbiome Aggregated Traits and Assembly Are More Sensitive to Soil Management than Diversity. | Neal AL, Hughes D, Clark IM, Jansson JK, Hirsch PR. | mSystems | 10.1128/msystems.01056-20 | 2021 | | |
| Implications for an imidazol-2-yl carbene intermediate in the rhodanase-catalyzed C-S bond formation reaction of anaerobic ergothioneine biosynthesis. | Cheng R, Lai R, Peng C, Lopez J, Li Z, Naowarojna N, Li K, Wong C, Lee N, Whelan SA, Qiao L, Grinstaff MW, Wang J, Cui Q, Liu P. | ACS Catal | 10.1021/acscatal.0c04886 | 2021 | | |
| Metabolism | Structural model and spectroscopic characteristics of the FMO antenna protein from the aerobic chlorophototroph, Candidatus Chloracidobacterium thermophilum. | Wen J, Tsukatani Y, Cui W, Zhang H, Gross ML, Bryant DA, Blankenship RE. | Biochim Biophys Acta | 10.1016/j.bbabio.2010.09.008 | 2011 | |
| Genetics | The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. II. Metabolic Functions of Abundant Community Members Predicted from Metagenomic Analyses. | Thiel V, Hugler M, Ward DM, Bryant DA. | Front Microbiol | 10.3389/fmicb.2017.00943 | 2017 | |
| Recent advances in the structural diversity of reaction centers. | Gisriel CJ, Azai C, Cardona T. | Photosynth Res | 10.1007/s11120-021-00857-9 | 2021 | | |
| Enzymology | Isolation and characterization of homodimeric type-I reaction center complex from Candidatus Chloracidobacterium thermophilum, an aerobic chlorophototroph. | Tsukatani Y, Romberger SP, Golbeck JH, Bryant DA. | J Biol Chem | 10.1074/jbc.m111.323329 | 2012 | |
| Enzymology | A paralog of a bacteriochlorophyll biosynthesis enzyme catalyzes the formation of 1,2-dihydrocarotenoids in green sulfur bacteria. | Canniffe DP, Thweatt JL, Gomez Maqueo Chew A, Hunter CN, Bryant DA. | J Biol Chem | 10.1074/jbc.ra118.004672 | 2018 | |
| Enzymology | Metatranscriptomic analyses of chlorophototrophs of a hot-spring microbial mat. | Liu Z, Klatt CG, Wood JM, Rusch DB, Ludwig M, Wittekindt N, Tomsho LP, Schuster SC, Ward DM, Bryant DA. | ISME J | 10.1038/ismej.2011.37 | 2011 | |
| Complete genome sequence of the thermophilic Acidobacteria, Pyrinomonas methylaliphatogenes type strain K22(T). | Lee KC, Morgan XC, Power JF, Dunfield PF, Huttenhower C, Stott MB. | Stand Genomic Sci | 10.1186/s40793-015-0099-5 | 2015 | | |
| Spectropolarimetry of Primitive Phototrophs as Global Surface Biosignatures. | Sparks WB, Parenteau MN, Blankenship RE, Germer TA, Patty CHL, Bott KM, Telesco CM, Meadows VS. | Astrobiology | 10.1089/ast.2020.2272 | 2021 | | |
| Metabolism | Short-Term Stable Isotope Probing of Proteins Reveals Taxa Incorporating Inorganic Carbon in a Hot Spring Microbial Mat. | Steinke L, Slysz GW, Lipton MS, Klatt C, Moran JJ, Romine MF, Wood JM, Anderson G, Bryant DA, Ward DM. | Appl Environ Microbiol | 10.1128/aem.01829-19 | 2020 | |
| Absence of Selection for Quantum Coherence in the Fenna-Matthews-Olson Complex: A Combined Evolutionary and Excitonic Study. | Valleau S, Studer RA, Hase F, Kreisbeck C, Saer RG, Blankenship RE, Shakhnovich EI, Aspuru-Guzik A. | ACS Cent Sci | 10.1021/acscentsci.7b00269 | 2017 | | |
| Biosignatures Associated with Freshwater Microbialites. | White RA, Soles SA, Brady AL, Southam G, Lim DSS, Slater GF. | Life (Basel) | 10.3390/life10050066 | 2020 | | |
| Enzymology | Absence of the cbb3 Terminal Oxidase Reveals an Active Oxygen-Dependent Cyclase Involved in Bacteriochlorophyll Biosynthesis in Rhodobacter sphaeroides. | Chen GE, Canniffe DP, Martin EC, Hunter CN. | J Bacteriol | 10.1128/jb.00121-16 | 2016 | |
| Phylogeny | The influence of temperature and pH on bacterial community composition of microbial mats in hot springs from Costa Rica. | Uribe-Lorio L, Brenes-Guillen L, Hernandez-Ascencio W, Mora-Amador R, Gonzalez G, Ramirez-Umana CJ, Diez B, Pedros-Alio C. | Microbiologyopen | 10.1002/mbo3.893 | 2019 | |
| Metabolism | Physiological Studies of Chlorobiaceae Suggest that Bacillithiol Derivatives Are the Most Widespread Thiols in Bacteria. | Hiras J, Sharma SV, Raman V, Tinson RAJ, Arbach M, Rodrigues DF, Norambuena J, Hamilton CJ, Hanson TE. | mBio | 10.1128/mbio.01603-18 | 2018 | |
| Anoxygenic photosynthesis and iron-sulfur metabolic potential of Chlorobia populations from seasonally anoxic Boreal Shield lakes. | Tsuji JM, Tran N, Schiff SL, Venkiteswaran JJ, Molot LA, Tank M, Hanada S, Neufeld JD. | ISME J | 10.1038/s41396-020-0725-0 | 2020 | | |
| Enzymology | Enzyme-fusion strategies for redirecting and improving carotenoid synthesis in S. cerevisiae. | Rabeharindranto H, Castano-Cerezo S, Lautier T, Garcia-Alles LF, Treitz C, Tholey A, Truan G. | Metab Eng Commun | 10.1016/j.mec.2019.e00086 | 2019 | |
| Early Archean origin of heterodimeric Photosystem I. | Cardona T. | Heliyon | 10.1016/j.heliyon.2018.e00548 | 2018 | | |
| Complete genome sequence of Granulicella mallensis type strain MP5ACTX8(T), an acidobacterium from tundra soil. | Rawat SR, Mannisto MK, Starovoytov V, Goodwin L, Nolan M, Hauser LJ, Land M, Davenport KW, Woyke T, Haggblom MM. | Stand Genomic Sci | 10.4056/sigs.4328031 | 2013 | | |
| Metabolism | The transjugation machinery of Thermus thermophilus: Identification of TdtA, an ATPase involved in DNA donation. | Blesa A, Baquedano I, Quintans NG, Mata CP, Caston JR, Berenguer J. | PLoS Genet | 10.1371/journal.pgen.1006669 | 2017 | |
| Genetics | Acidobacteria Subgroups and Their Metabolic Potential for Carbon Degradation in Sugarcane Soil Amended With Vinasse and Nitrogen Fertilizers. | de Chaves MG, Silva GGZ, Rossetto R, Edwards RA, Tsai SM, Navarrete AA. | Front Microbiol | 10.3389/fmicb.2019.01680 | 2019 | |
| Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms. | Kim YM, Nowack S, Olsen MT, Becraft ED, Wood JM, Thiel V, Klapper I, Kuhl M, Fredrickson JK, Bryant DA, Ward DM, Metz TO. | Front Microbiol | 10.3389/fmicb.2015.00209 | 2015 | | |
| Pyrosequencing analysis revealed complex endogenetic microorganism community from natural DongChong XiaCao and its microhabitat. | Xia F, Liu Y, Guo MY, Shen GR, Lin J, Zhou XW. | BMC Microbiol | 10.1186/s12866-016-0813-5 | 2016 | | |
| Metabolism | Time-resolved comparative molecular evolution of oxygenic photosynthesis. | Oliver T, Sanchez-Baracaldo P, Larkum AW, Rutherford AW, Cardona T. | Biochim Biophys Acta Bioenerg | 10.1016/j.bbabio.2021.148400 | 2021 | |
| Phylogeny | Ecological divergence of a novel group of Chloroflexus strains along a geothermal gradient. | Weltzer ML, Miller SR. | Appl Environ Microbiol | 10.1128/aem.02753-12 | 2013 | |
| Genetics | Community structure and function of high-temperature chlorophototrophic microbial mats inhabiting diverse geothermal environments. | Klatt CG, Inskeep WP, Herrgard MJ, Jay ZJ, Rusch DB, Tringe SG, Niki Parenteau M, Ward DM, Boomer SM, Bryant DA, Miller SR. | Front Microbiol | 10.3389/fmicb.2013.00106 | 2013 | |
| CsmA Protein is Associated with BChl a in the Baseplate Subantenna of Chlorosomes of the Photosynthetic Green Filamentous Bacterium Oscillochloris trichoides belonging to the Family Oscillochloridaceae. | Zobova A, Taisova A, Lukashev E, Fedorova N, Baratova L, Fetisova Z. | J Biophys | 10.1155/2011/860382 | 2011 | | |
| Metabolism | Identification of a gene essential for the first committed step in the biosynthesis of bacteriochlorophyll c. | Liu Z, Bryant DA. | J Biol Chem | 10.1074/jbc.m111.249433 | 2011 | |
| A physiological perspective on the origin and evolution of photosynthesis. | Martin WF, Bryant DA, Beatty JT. | FEMS Microbiol Rev | 10.1093/femsre/fux056 | 2018 | | |
| Anoxygenic Phototrophs Span Geochemical Gradients and Diverse Morphologies in Terrestrial Geothermal Springs. | Hamilton TL, Bennett AC, Murugapiran SK, Havig JR. | mSystems | 10.1128/msystems.00498-19 | 2019 | | |
| Phylogeny | Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. | Eloe-Fadrosh EA, Paez-Espino D, Jarett J, Dunfield PF, Hedlund BP, Dekas AE, Grasby SE, Brady AL, Dong H, Briggs BR, Li WJ, Goudeau D, Malmstrom R, Pati A, Pett-Ridge J, Rubin EM, Woyke T, Kyrpides NC, Ivanova NN. | Nat Commun | 10.1038/ncomms10476 | 2016 | |
| Linking ecology and systematics of acidobacteria: Distinct habitat preferences of the Acidobacteriia and Blastocatellia in tundra soils. | Ivanova AA, Zhelezova AD, Chernov TI, Dedysh SN. | PLoS One | 10.1371/journal.pone.0230157 | 2020 | | |
| Metabolism | Rhizosphere microbial community composition affects cadmium and zinc uptake by the metal-hyperaccumulating plant Arabidopsis halleri. | Muehe EM, Weigold P, Adaktylou IJ, Planer-Friedrich B, Kraemer U, Kappler A, Behrens S. | Appl Environ Microbiol | 10.1128/aem.03359-14 | 2015 | |
| Phylogeny | Bar-coded pyrosequencing reveals shared bacterial community properties along the temperature gradients of two alkaline hot springs in Yellowstone National Park. | Miller SR, Strong AL, Jones KL, Ungerer MC. | Appl Environ Microbiol | 10.1128/aem.02792-08 | 2009 | |
| Metabolism | Biochemical Validation of the Glyoxylate Cycle in the Cyanobacterium Chlorogloeopsis fritschii Strain PCC 9212. | Zhang S, Bryant DA. | J Biol Chem | 10.1074/jbc.m115.648170 | 2015 | |
| A metastable equilibrium model for the relative abundances of microbial phyla in a hot spring. | Dick JM, Shock EL. | PLoS One | 10.1371/journal.pone.0072395 | 2013 | | |
| Metabolism | A Ubiquitous Platform for Bacterial Nanotube Biogenesis. | Bhattacharya S, Baidya AK, Pal RR, Mamou G, Gatt YE, Margalit H, Rosenshine I, Ben-Yehuda S. | Cell Rep | 10.1016/j.celrep.2019.02.055 | 2019 | |
| Effect of light wavelength on hot spring microbial mat biodiversity. | Nishida A, Thiel V, Nakagawa M, Ayukawa S, Yamamura M. | PLoS One | 10.1371/journal.pone.0191650 | 2018 | | |
| Genetics | The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat. | Olsen MT, Nowack S, Wood JM, Becraft ED, LaButti K, Lipzen A, Martin J, Schackwitz WS, Rusch DB, Cohan FM, Bryant DA, Ward DM. | Front Microbiol | 10.3389/fmicb.2015.00604 | 2015 | |
| The molecular dimension of microbial species: 2. Synechococcus strains representative of putative ecotypes inhabiting different depths in the Mushroom Spring microbial mat exhibit different adaptive and acclimative responses to light. | Nowack S, Olsen MT, Schaible GA, Becraft ED, Shen G, Klapper I, Bryant DA, Ward DM. | Front Microbiol | 10.3389/fmicb.2015.00626 | 2015 | | |
| Bacteriochlorophyll f: properties of chlorosomes containing the "forbidden chlorophyll". | Vogl K, Tank M, Orf GS, Blankenship RE, Bryant DA. | Front Microbiol | 10.3389/fmicb.2012.00298 | 2012 | | |
| Genetics | Metagenomics of an Alkaline Hot Spring in Galicia (Spain): Microbial Diversity Analysis and Screening for Novel Lipolytic Enzymes. | Lopez-Lopez O, Knapik K, Cerdan ME, Gonzalez-Siso MI. | Front Microbiol | 10.3389/fmicb.2015.01291 | 2015 | |
| Genetics | Phylogenetic and evolutionary patterns in microbial carotenoid biosynthesis are revealed by comparative genomics. | Klassen JL. | PLoS One | 10.1371/journal.pone.0011257 | 2010 | |
| Metabolism | Envelope proteins of the CsmB/CsmF and CsmC/CsmD motif families influence the size, shape, and composition of chlorosomes in Chlorobaculum tepidum. | Li H, Bryant DA. | J Bacteriol | 10.1128/jb.00707-09 | 2009 | |
| Genetics | "Candidatus Thermonerobacter thiotrophicus," A Non-phototrophic Member of the Bacteroidetes/Chlorobi With Dissimilatory Sulfur Metabolism in Hot Spring Mat Communities. | Thiel V, Garcia Costas AM, Fortney NW, Martinez JN, Tank M, Roden EE, Boyd ES, Ward DM, Hanada S, Bryant DA. | Front Microbiol | 10.3389/fmicb.2018.03159 | 2018 | |
| Phylogeny | 'Candidatus Thermochlorobacter aerophilum:' an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics. | Liu Z, Klatt CG, Ludwig M, Rusch DB, Jensen SI, Kuhl M, Ward DM, Bryant DA. | ISME J | 10.1038/ismej.2012.24 | 2012 | |
| Metabolism | Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring. | Klatt CG, Liu Z, Ludwig M, Kuhl M, Jensen SI, Bryant DA, Ward DM. | ISME J | 10.1038/ismej.2013.52 | 2013 | |
| Metabolism | Golgi anti-apoptotic proteins are highly conserved ion channels that affect apoptosis and cell migration. | Carrara G, Saraiva N, Parsons M, Byrne B, Prole DL, Taylor CW, Smith GL. | J Biol Chem | 10.1074/jbc.m115.637306 | 2015 | |
| Phylogeny | Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential. | Klatt CG, Wood JM, Rusch DB, Bateson MM, Hamamura N, Heidelberg JF, Grossman AR, Bhaya D, Cohan FM, Kuhl M, Bryant DA, Ward DM. | ISME J | 10.1038/ismej.2011.73 | 2011 | |
| The molecular evolution of the Qo motif. | Kao WC, Hunte C. | Genome Biol Evol | 10.1093/gbe/evu147 | 2014 | | |
| Genetics | Complete genome sequence of the filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus. | Tang KH, Barry K, Chertkov O, Dalin E, Han CS, Hauser LJ, Honchak BM, Karbach LE, Land ML, Lapidus A, Larimer FW, Mikhailova N, Pitluck S, Pierson BK, Blankenship RE. | BMC Genomics | 10.1186/1471-2164-12-334 | 2011 | |
| Metabolism | The chlorosome: a prototype for efficient light harvesting in photosynthesis. | Oostergetel GT, van Amerongen H, Boekema EJ. | Photosynth Res | 10.1007/s11120-010-9533-0 | 2010 | |
| Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum. | Wu D, Raymond J, Wu M, Chatterji S, Ren Q, Graham JE, Bryant DA, Robb F, Colman A, Tallon LJ, Badger JH, Madupu R, Ward NL, Eisen JA. | PLoS One | 10.1371/journal.pone.0004207 | 2009 | | |
| Elioraea tepida, sp. nov., a Moderately Thermophilic Aerobic Anoxygenic Phototrophic Bacterium Isolated from the Mat Community of an Alkaline Siliceous Hot Spring in Yellowstone National Park, WY, USA. | Saini MK, Yoshida S, Sebastian A, Hara E, Tamaki H, Soulier NT, Albert I, Hanada S, Tank M, Bryant DA. | Microorganisms | 10.3390/microorganisms10010080 | 2021 | | |
| Phylogeny | Pyrinomonas methylaliphatogenes gen. nov., sp. nov., a novel group 4 thermophilic member of the phylum Acidobacteria from geothermal soils. | Crowe MA, Power JF, Morgan XC, Dunfield PF, Lagutin K, Rijpstra WIC, Vyssotski M, Sinninghe Damste JS, Houghton KM, Ryan JLJ, Stott MB. | Int J Syst Evol Microbiol | 10.1099/ijs.0.055079-0 | 2014 | |
| Phylogeny | Chloracidobacterium thermophilum gen. nov., sp. nov.: an anoxygenic microaerophilic chlorophotoheterotrophic acidobacterium. | Tank M, Bryant DA | Int J Syst Evol Microbiol | 10.1099/ijs.0.000113 | 2015 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive163735.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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