Name: Planococcus citreus JCM 2535
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163340

Type strain:

Species: Planococcus citreus

Culture col. no.: JCM 2535, ATCC 15234, CCM 2389, IAM 13051, NCIMB 1496, NCMB 1349

Strain history: M. V. Hao HK 708 <-- AJ 3349 <-- CCM 2389 <-- E. Leifson XQ40.

NCBI tax ID(s): 1373 (species)

SI-ID 9207

LMG 17228, ATCC 15234, CCM 2389, IAM 13051, JCM 2535, NCIMB 1496, NCMB 1496, NCMB1349

Special Collections

Other strains from Planococcus citreus

Section

Planococcus citreus JCM 2535 is a bacterium that was isolated from Marine clam.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Planococcus*
	Species	**Planococcus citreus**
	Full Scientific Name (LPSN)	Planococcus citreus Migula 1894 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8 (MK-7)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Marine clam
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC379148 (>99% sequence identity) for Planococcus from Microbeatlas

Aquatic Samples	9
Soil Samples	15
Animal Samples	9
Plant Samples	4
Total Samples	37

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Planococcus citreus gene for 16S rRNA, partial sequence, strain: JCM 2535	LC379148	1473	GenBank ENA	1373 tax ID

[Ref.: #67770]	GC-content	50.3 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	49 mol%	fluorimetric

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 2535, ATCC 15234, CCM 2389, IAM 13051, NCIMB 1496, NCMB 1349

[Ref.: #114035]

SI-ID 9207

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#114035

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID9207.1 )

* These data were automatically processed and therefore are not curated

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