Halococcus agarilyticus (KCTC 4143, JCM 19592)

Name: Halococcus agarilyticus (KCTC 4143, JCM 19592)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162564

Type strain

Culture col. no. KCTC 4143 JCM 19592

NCBI tax ID(s) 1232219

Special Collections JCM KCTC

Links

Halococcus agarilyticus JCM 19592 is a thermophilic prokaryote that was isolated from Solar salt in the Philippines.

thermophilic 16S sequence

Name and taxonomic classification

SI-ID 393808

JCM 19592

@ref 20215

Last LPSN update 2025-12-16 10:09:00

Domain Methanobacteriati

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Halococcaceae

Genus Halococcus

Species Halococcus agarilyticus

Full scientific name Halococcus agarilyticus Minegishi et al. 2015

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	42	thermophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeSolar salt in the Philippines

Taxonmaps

69479

Global distribution of 16S sequence AB748562 (>99% sequence identity) for Halococcus from Microbeatlas

Aquatic Samples	165
Soil Samples	25
Animal Samples	43
Plant Samples
Total Samples	233

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Halococcus agarilyticus gene for 16S rRNA, partial sequence, strain: 62E	AB748562	1474		1232219

GC content

@ref	GC-content (mol%)	Method
67770	63	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halococcus agarilyticus sp. nov., an agar-degrading haloarchaeon isolated from commercial salt.	Minegishi H, Echigo A, Shimane Y, Kamekura M, Itoh T, Ohkuma M, Usami R	Int J Syst Evol Microbiol	10.1099/ijs.0.000151	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halococcus agarilyticus (KCTC 4143, JCM 19592)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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