Name: Oceanospirillum sanctuarii JCM 19193
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162425

Type strain:

Species: Oceanospirillum sanctuarii

Culture col. no.: JCM 19193, KCTC 52973, MTCC 12005

Strain history: P. Anil Kumar AK56.

NCBI tax ID(s): 1434821 (species)

Special Collections

JCM
KCTC

Section

Oceanospirillum sanctuarii JCM 19193 is a motile bacterium that was isolated from Sediment sample at the Coringa Wildlife Sanctuary.

motile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Oceanospirillaceae*
	Genus	*Oceanospirillum*
	Species	**Oceanospirillum sanctuarii**
	Full Scientific Name (LPSN)	Oceanospirillum sanctuarii Sidhu et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %100

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %92.77

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sediment sample at the Coringa Wildlife Sanctuary
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KF728826 (>99% sequence identity) for Oceanospirillum sanctuarii from Microbeatlas

Aquatic Samples	472
Soil Samples	13
Animal Samples	57
Plant Samples	5
Total Samples	547

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Oceanospirillum sanctuarii 16S ribosomal RNA gene, partial sequence	KF728826	1488	GenBank ENA	1434821 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Oceanospirillum sanctuarii AK56	GCA_002150805	contig	GenBank ENA	1434821 tax ID

[Ref.: #67770]

GC-content

50.3 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Oceanospirillum sanctuarii AK56 NCBI: GCA_002150805.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	100	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.892	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	78.016	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	92.77	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	98.406	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	84.096	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19193, KCTC 52973, MTCC 12005

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanospirillum sanctuarii sp. nov., isolated from a sediment sample.	Sidhu C, Thakur S, Sharma G, Tanuku NRS, Pinnaka AK	Int J Syst Evol Microbiol	10.1099/ijsem.0.002132	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Oceanospirillum sanctuarii AK56

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