Name: Streptomyces griseus subsp. griseus C1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16229

Type strain:

Species: Streptomyces griseus subsp. griseus

Strain Designation: C1, 18-16, D 100, C₁

Culture col. no.: DSM 40236, ATCC 23345, ATCC 23921, CBS 905.68, ETH 4289, IFO 12875, IMRU 3463, ISP 5236, KCC S-0047, KCC S-0644, NBRC 12875, NCTC 13033, RIA 1176, Waksman 18-16, JCM 4047, BCRC 13478, CBS 160.45, CCT 4836, CCUG 11104, CECT 3330, CFBP 4546, CGMCC 4.1419, CIP 105124, HAMBI 2315, IAM 12311, IFO 15744, JCM 4644, KACC 20084, KCTC 9080, KCTC 9135, LMG 19302, MTCC 4734, NBIMCC 2442, NBRC 15744, NCIMB 13023, NRRL B-2682, PCM 2331, VKM Ac-800, VTT E-072676, VTT E-991424

Strain history: KCC S-0047 <-- Y. Okami (NIHJ 106) <-- IMRU 3463.

NCBI tax ID(s): 1911 (species)

Other strains from Streptomyces griseus subsp. griseus

Section

Streptomyces griseus subsp. griseus C1 is a thermophilic human pathogen that produces antibiotic compounds and was isolated from soil.

antibiotic compound production
human pathogen
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	Streptomycetales
	Family	Streptomycetaceae
	Genus	*Streptomyces*
	Species	**Streptomyces griseus subsp. griseus**
	Full Scientific Name (PNU)	Streptomyces griseus subsp. griseus (Krainsky 1914) Pridham 1970 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

MEDIUM 116 - for Streptomyces, Nocardia, Streptosporangium and Mycobacterium chlorophenolicum

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #9396]		growth	28 °C
[Ref.: #22953]	no	growth	45 °C
[Ref.: #37968]		growth	30 °C
[Ref.: #67770]		growth	28 °C

[Ref.: #9396]	Temperature range	mesophilic
[Ref.: #22953]	Temperature range	thermophilic
[Ref.: #37968]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9396]	Name of produced compound	restriction endonuclease SgrI
[Ref.: #9396]	Name of produced compound	streptomycin
[Ref.: #9396]	Name of produced compound	cycloheximide
[Ref.: #20216]	Name of produced compound	Streptomycin
[Ref.: #20216]	Name of produced compound	Cycloheximid
[Ref.: #20216]	Name of produced compound	Endonuclease SgrI

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #22953]		NaCl		growth	7	%(w/v)

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Observation

quinones: MK-9(H₈), MK-9(H₆), MK-9(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22953]	acetate ChEBI	+	growth
[Ref.: #22953]	adenine ChEBI	+	hydrolysis
[Ref.: #22953]	arbutin ChEBI	+	builds acid from
[Ref.: #22953]	citrate ChEBI	+	growth
[Ref.: #22953]	D-fructose ChEBI	+	growth
[Ref.: #22953]	D-galactose ChEBI	+	growth
[Ref.: #22953]	D-glucose ChEBI	+	growth
[Ref.: #22953]	D-mannitol ChEBI	+	growth
[Ref.: #22953]	D-mannose ChEBI	+	growth
[Ref.: #22953]	D-ribose ChEBI	+	growth
[Ref.: #22953]	D-xylose ChEBI	+	growth
[Ref.: #22953]	formate ChEBI	+	growth
[Ref.: #22953]	hypoxanthine ChEBI	+	hydrolysis
[Ref.: #22953]	lactose ChEBI	+	growth
[Ref.: #22953]	methyl D-glucoside ChEBI	+	growth
[Ref.: #22953]	propionate ChEBI	+	growth
[Ref.: #22953]	raffinose ChEBI	+	growth
[Ref.: #22953]	tween 20 ChEBI	+	hydrolysis
[Ref.: #22953]	tween 80 ChEBI	+	hydrolysis
[Ref.: #22953]	xanthine ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #67770]		streptomycin ChEBI

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9396]	Sample type/isolated from	soil

[Ref.: #24939]	Sample type/isolated from	contaminated sediment of River
[Ref.: #24939]	Geographic location (country and/or sea, region)	Lianjiang River at Guiyu
[Ref.: #24939]	Country	China
[Ref.: #24939]	Country ISO 3 Code	CHN
[Ref.: #24939]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9396]	Pathogenicity (human)	yes
[Ref.: #9396]	Pathogenicity (animal)	yes
[Ref.: #9396]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces griseus subsp. griseus gene for 16S rRNA, partial sequence, strain: NBRC 12875	AB184211	1458	ENA	67263 tax ID	*
[Ref.: #20218]	Streptomyces griseus 16S ribosomal RNA gene, partial sequence	AF056711	1537	ENA	1911 tax ID	*
[Ref.: #20218]	Streptomyces griseus subsp. griseus strain DSM40236 16S-23S intergenic spacer region, partial sequence	AF363492	300	ENA	67263 tax ID	*
[Ref.: #20218]	Streptomyces griseus subsp. griseus ISP 5236 16S ribosomal RNA gene, partial sequence	AY094371	1448	ENA	67263 tax ID	*
[Ref.: #20218]	Streptomyces griseus strain DSM 40236 16S ribosomal RNA gene, partial sequence	GU383152	779	ENA	1911 tax ID	*
[Ref.: #24939]	Sphingobium sp. C1 16S ribosomal RNA gene, partial sequence	KR712272	1452	GenBank	1673076 tax ID
[Ref.: #9396]	Streptomyces griseus 16S ribosomal RNA gene, partial sequence	AY207604	1490	ENA	1911 tax ID
[Ref.: #67770]	Streptomyces griseus subsp. griseus gene for 16S rRNA, partial sequence, strain: NBRC 15744	AB184699	1465	ENA	67263 tax ID
[Ref.: #67770]	S.griseus 16S, 23S, and 5S rRNA gene sequence	M76388	6869	ENA	67263 tax ID
[Ref.: #67770]	S.griseus 16S, 23S, and 5S rRNA gene sequence	X55435	6869	ENA	67263 tax ID
[Ref.: #67770]	S.griseus genes for 16S rRNA, 23S rRNA & 5S rRNA	X61478	6869	ENA

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces griseus strain DSM 40236	1911.11	wgs	PATRIC	1911 tax ID	*
[Ref.: #66792]	Streptomyces griseus strain NCTC13033	1911.17	wgs	PATRIC	1911 tax ID	*
[Ref.: #66792]	Streptomyces griseus NCTC 13033	2897015371	draft	JGI IMG/M	1911 tax ID	*
[Ref.: #66792]	Streptomyces griseus DSM 40236	2634166340	draft	JGI IMG/M	1911 tax ID	*
[Ref.: #66792]	Streptomyces griseus griseus DSM 40236	651716785	draft	JGI IMG/M	67263 tax ID	*
[Ref.: #67770]	Streptomyces griseus DSM 40236	GCA_900105705	contig	GenBank	1911 tax ID

[Ref.: #22953]	GC-content	71-72 mol%
[Ref.: #67770]	GC-content	72.2 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	72 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	71 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	71 mol%	fluorimetric

Availability in culture collections External links

[Ref.: #9396]

Culture collection no.

DSM 40236, ATCC 23345, ATCC 23921, CBS 905.68, ETH 4289, IFO 12875, IMRU 3463, ISP 5236, KCC S-0047, KCC S-0644, NBRC 12875, NCTC 13033, RIA 1176, Waksman 18-16, JCM 4047, BCRC 13478, CBS 160.45, CCT 4836, CCUG 11104, CECT 3330, CFBP 4546, CGMCC 4.1419, CIP 105124, HAMBI 2315, IAM 12311, IFO 15744, JCM 4644, KACC 20084, KCTC 9080, KCTC 9135, LMG 19302, MTCC 4734, NBIMCC 2442, NBRC 15744, NCIMB 13023, NRRL B-2682, PCM 2331, VKM Ac-800, VTT E-072676, VTT E-991424

[Ref.: #20218]

Associated Passport(s) in StrainInfo

55555, 55550, 55551, 229213, 165087, 55556, 55558, 55559, 165085, 55562, 334021, 486395, 55569

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Chromogenesis mirabilis in Streptomyces griseus.	Arai T, Mikami Y	Appl Microbiol	10.1128/am.24.5.768-771.1972	1972	*
Metabolism	Self-resistance of a Streptomyces which produces istamycins.	Yamamoto H, Hotta K, Okami Y, Umezawa H	J Antibiot (Tokyo)	10.7164/antibiotics.34.824	1981	*
Enzymology	Gene organization and primary structure of a ribosomal RNA gene cluster from Streptomyces griseus subsp. griseus.	Kim E, Kim H, Hong SP, Kang KH, Kho YH, Park YH	Gene	10.1016/0378-1119(93)90510-a	1993	*
Enzymology	Evidence of a role for NAD+-glycohydrolase and ADP-ribosyltransferase in growth and differentiation of Streptomyces griseus NRRL B-2682: inhibition by m-aminophenylboronic acid.	Penyige A, Deak E, Kalmanczhelyi A, Barabas G	Microbiology (Reading)	10.1099/13500872-142-8-1937	1996	*
Enzymology	Membrane-bound and extracellular beta-lactamase production with developmental regulation in Streptomyces griseus NRRL B-2682.	Deak E, SzaboA I, Kalmaczhelyi A, Gal Z, Barabas G, Penyige A	Microbiology (Reading)	10.1099/00221287-144-8-2169	1998	*
Phylogeny	Taxonomic study of a chromomycin-producing strain and reclassification of Streptomyces cavourensis subsp. washingtonensis as a later synonym of Streptomyces griseus.	Wu X, Wen Y, Qian C, Li O, Fang H, Chen W	Int J Syst Evol Microbiol	10.1099/ijs.0.65628-0	2008	*
Metabolism	Characterization of new class III lantibiotics--erythreapeptin, avermipeptin and griseopeptin from Saccharopolyspora erythraea, Streptomyces avermitilis and Streptomyces griseus demonstrates stepwise N-terminal leader processing.	Voller GH, Krawczyk JM, Pesic A, Krawczyk B, Nachtigall J, Sussmuth RD	Chembiochem	10.1002/cbic.201200118	2012	*
Phylogeny	Different Secondary Metabolite Profiles of Phylogenetically almost Identical Streptomyces griseus Strains Originating from Geographically Remote Locations.	Sottorff I, Wiese J, Lipfert M, Preusske N, Sonnichsen FD, Imhoff JF	Microorganisms	10.3390/microorganisms7060166	2019	*

References

#9396

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40236

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22953

Zhiheng Liu, Yanlin Shi, Yamei Zhang, Zhihong Zhou, Zhitang Lu, Wei Li, Ying Huang, Carlos Rodríguez, Michael Goodfellow: Classification of Streptomyces griseus (Krainsky 1914) Waksman and Henrici 1948 and related species and the transfer of 'Microstreptospora cinerea' to the genus Streptomyces as Streptomyces yanii sp. nov.. IJSEM 55: 1605 - 1610 2005 ( DOI 10.1099/ijs.0.63654-0 , PubMed 16014489 )

#37968 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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