Name: Sulfurivirga caldicuralii JCM 13440
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 161358

Type strain:

Species: Sulfurivirga caldicuralii

Culture col. no.: JCM 13440

Strain history: K. Takai VW1.

NCBI tax ID(s): 364032 (species)

SI-ID 301428

JCM 13440

Special Collections

Other strains from Sulfurivirga caldicuralii

Section

Sulfurivirga caldicuralii JCM 13440 is a bacterium that was isolated from Hydrothermal fluid sample from a shallow hydrothermal system occurring in coral reefs off Taketomi Island.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Beggiatoales*
	Family	*Piscirickettsiaceae*
	Genus	*Sulfurivirga*
	Species	**Sulfurivirga caldicuralii**
	Full Scientific Name (LPSN)	Sulfurivirga caldicuralii Takai et al. 2006

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	55 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Hydrothermal fluid sample from a shallow hydrothermal system occurring in coral reefs off Taketomi Island
[Ref.: #67770]	Geographic location (country and/or sea, region)	Okinawa
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB245480 (>99% sequence identity) for Sulfurivirga caldicuralii subclade from Microbeatlas

Aquatic Samples	143
Soil Samples	35
Animal Samples	154
Plant Samples	14
Total Samples	346

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sulfurivirga caldicuralii gene for 16S rRNA, partial sequence, strain: VW1	AB245480	1456	GenBank ENA	364032 tax ID

[Ref.: #67770]

GC-content

51.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 13440

[Ref.: #113373]

SI-ID 301428

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113373

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID301428.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Sulfurivirga caldicuralii in external resources:
SILVA
BRENDA
PANGAEA
GBIF