Cite this strain

Shewanella benthica (JCM 10176)

Name: Shewanella benthica (JCM 10176)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160890

Type strain

Culture col. no. JCM 10176

NCBI tax ID(s) 43661

Special Collections JCM

History Y. Nogi DB6101.

Links

Shewanella benthica JCM 10176 is a psychrophilic prokaryote that was isolated from Marine sediment at a depth of 5,110 m.

psychrophilic 16S sequence

Name and taxonomic classification

SI-ID 111408

JCM 10176

@ref 20215

Last LPSN update 2026-02-09 11:39:00

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Shewanellaceae

Genus Shewanella

Species Shewanella benthica

Full scientific name Shewanella benthica MacDonell and Colwell 1986

BacDive ID	Other strains from **Shewanella benthica** (6)	Type strain
14061	S. benthica UM 145, W 145, DSM 8812, ATCC 43992 (type strain)
160888	S. benthica JCM 10173
160889	S. benthica JCM 10174
160891	S. benthica JCM 10177
160892	S. benthica JCM 10178
160901	S. benthica JCM 10264

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	4	psychrophilic

Physiology and metabolism

Observation

67770

Observationquinones: Q-7, Q-8, MK-7

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country
67770	Marine sediment at a depth of 5,110 m	Ryukyu Trench	Pacific Ocean

Taxonmaps

69479

Global distribution of 16S sequence D21221 (>99% sequence identity) for Shewanella from Microbeatlas

Aquatic Samples	831
Soil Samples	36
Animal Samples	400
Plant Samples	14
Total Samples	1281

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Shewanella sp. DB6101 gene for 16S rRNA, partial sequence	D21221	1506		338048

GC content

@ref	GC-content (mol%)	Method
67770	49.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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