Cite this strain

Shewanella benthica (JCM 10173)

Name: Shewanella benthica (JCM 10173)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160888

Type strain

Culture col. no. JCM 10173

NCBI tax ID(s) 43661

Special Collections JCM

History JCM <-- Y. Nogi DB172R.

Links

Shewanella benthica JCM 10173 is a bacterium that was isolated from Marine sediment at a depth of 6,499 m.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 111405

JCM 10173

@ref 20215

Last LPSN update 2026-05-29 08:44:33

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Shewanellaceae

Genus Shewanella

Species Shewanella benthica

Full scientific name Shewanella benthica MacDonell and Colwell 1986

BacDive ID	Other strains from **Shewanella benthica** (6)	Type strain
14061	S. benthica UM 145, W 145, DSM 8812, ATCC 43992 (type strain)
160889	S. benthica JCM 10174
160890	S. benthica JCM 10176
160891	S. benthica JCM 10177
160892	S. benthica JCM 10178
160901	S. benthica JCM 10264

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	4

Physiology and metabolism

Observation

67770

Observationquinones: Q-7, Q-8

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country
67770	Marine sediment at a depth of 6,499 m	Izu-Bonin Trench	Pacific Ocean

Taxonmaps

69479

Global distribution of 16S sequence D63824 (>99% sequence identity) for Shewanella from Microbeatlas

Aquatic Samples	831
Soil Samples	36
Animal Samples	400
Plant Samples	14
Total Samples	1281

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Shewanella sp. DB172R gene for 16S rRNA	D63824	1507		338053

GC content

@ref	GC-content (mol%)	Method
67770	48.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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