Streptomyces umbrinus | Type strain | DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

Strain identifier

BacDive ID: 16061

Type strain:

Species: Streptomyces umbrinus

Culture col. no.: DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	31-03-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Actinobacteria
	Class	Actinobacteria
	Order	Streptomycetales
	Family	Streptomycetaceae
	Genus	Streptomyces
	Species	Streptomyces umbrinus
	Full Scientific Name (PNU)	Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958 (Approved Lists 1980)

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9429]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

[Ref.: #9429]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9429]			growth	28 ̊C

[Ref.: #9429]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9429]

Sample type/isolated from

soil

[Ref.: #9429]

Country

USSR

[Ref.: #9429]

Continent

Asia

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9429]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces umbrinus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4521	D44209 ENA	16S	120	67370 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces umbrinus gene for 16S rRNA, partial sequence, strain: NBRC 13091	AB184305 ENA	16S	1479	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572T 16S ribosomal RNA gene, partial sequence	DQ442549 ENA	16S	1538	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 tryptophan synthetase subunit B (trpB) gene, partial cds	HQ014921 ENA		571	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 ATP synthetase beta subunit (atpD) gene, partial cds	HQ014953 ENA		496	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 recombinase A (recA) gene, partial cds	HQ014985 ENA		504	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 RNA polymerase subunit B (rpoB) gene, partial cds	HQ015017 ENA		540	67370 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 DNA gyrase B gene, partial cds	JQ838207 ENA		408	67370 tax ID	*

Availability in culture collectionsStrain availability

[Ref.: #9429]

Culture collection no.

DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

[Ref.: #9429]

Strain history

<- E.B. Shirling, ISP <- G.F. Gauze INA

[Ref.: #20218]

Associated Passport(s) in StrainInfo

165184, 100791, 100793, 229170, 100796, 165186, 100797, 334574, 100800

References

#9429

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40278

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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