Streptomyces umbrinus | Type strain | DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

Strain identifier

BacDive ID: 16061

Type strain:

Species: Streptomyces umbrinus

Culture col. no.: DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9429]	Domain	Bacteria
[Ref.: #9429]	Phylum	Actinobacteria
[Ref.: #9429]	Class	Actinobacteria
[Ref.: #9429]	Order	Actinomycetales
[Ref.: #9429]	Family	Streptomycetaceae
[Ref.: #9429]	Genus	Streptomyces
[Ref.: #9429]	Species	Streptomyces umbrinus
[Ref.: #9429]	Full Scientific Name	Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958
[Ref.: #9429]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	26-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Species	Streptomyces umbrinus	comb. nov. (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Full Scientific Name	Streptomyces umbrinus (Sveshnikova 1957) Pridham et al. 1958

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9429]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

[Ref.: #9429]

Culture medium growth

[Ref.: #9429]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9429]			growth	28 ̊C

[Ref.: #9429]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9429]

Sample type/isolated from

soil

[Ref.: #9429]

Country

USSR

[Ref.: #9429]

Continent

Asia

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9429]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces umbrinus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4521	D44209	120	67370	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces umbrinus gene for 16S rRNA, partial sequence, strain: NBRC 13091	AB184305	1479	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572T 16S ribosomal RNA gene, partial sequence	DQ442549	1538	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 tryptophan synthetase subunit B (trpB) gene, partial cds	HQ014921	571	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 ATP synthetase beta subunit (atpD) gene, partial cds	HQ014953	496	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 recombinase A (recA) gene, partial cds	HQ014985	504	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 RNA polymerase subunit B (rpoB) gene, partial cds	HQ015017	540	67370	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces umbrinus strain NRRL B-2572 DNA gyrase B gene, partial cds	JQ838207	408	67370	*

Availability in culture collectionsStrain availability

[Ref.: #9429]

Culture collection no.

DSM 40278, ATCC 19929, ATCC 25503, CBS 645.69, IFO 13091, INA 1703, ISP 5278, NBRC 13091, RIA 1283

[Ref.: #9429]

Strain history

<- E.B. Shirling, ISP <- G.F. Gauze INA

[Ref.: #20218]

Associated Passport(s) in StrainInfo

165184, 100791, 100793, 229170, 100796, 165186, 100797, 334574, 100800

References

#9429

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40278

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces umbrinus in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF