Name: Anoxybacillus sp. DT3-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160595

Type strain:

Species: Anoxybacillus sp.

Strain Designation: DT3-1

Culture col. no.: DSM 28778

Strain history: <- K. M. Goh, UTM, Fac, of Bioscs. and Med. Eng., Skudai, Johor, Malaysia; DT3-1 <- I. M. Haris and K. M. Goh

NCBI tax ID(s): 1872573 (species)

SI-ID 405419

DSM 28778

Special Collections

DSMZ

Other strains from Anoxybacillus sp.

Section

Anoxybacillus sp. DT3-1 is a spore-forming bacterium that was isolated from water sample.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Anoxybacillus*
	Full Scientific Name (LPSN)	Anoxybacillus Pikuta et al. 2000

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67503]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #67503]

Culture medium growth

[Ref.: #67503]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67503]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67503]			growth	55 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67503]	Sample type/isolated from	water sample
[Ref.: #67503]	Geographic location (country and/or sea, region)	Selangor, Tua hot spring
[Ref.: #67503]	Country	Malaysia
[Ref.: #67503]	Country ISO 3 Code	MYS
[Ref.: #67503]	Continent	Asia
[Ref.: #67503]	Geographic location	3.1371°/101.8350°
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence GU129931 (>99% sequence identity) for Anoxybacillus from Microbeatlas

Aquatic Samples	335
Soil Samples	183
Animal Samples	1423
Plant Samples	87
Total Samples	2028

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67503]	Anoxybacillus sp. DT3-1 16S ribosomal RNA gene, partial sequence	GU129931	1518	GenBank ENA	198467 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anoxybacillus sp. DT3-1	690871.3	wgs	PATRIC	198467 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anoxybacillus sp. DT3-1 PATRIC: 690871.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	79.002	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	79.158	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	84.71	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	51.636	no
[Ref.: #69480]	thermophilic	thermophileⓘ	yes	68.034	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	77.824	no

Availability in culture collections External links

[Ref.: #67503]

Culture collection no.

DSM 28778

[Ref.: #112834]

SI-ID 405419

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Purification and characterization of a novel GH1 beta-glucosidase from Jeotgalibacillus malaysiensis.	Liew KJ, Lim L, Woo HY, Chan KG, Shamsir MS, Goh KM	Int J Biol Macromol	10.1016/j.ijbiomac.2018.04.156	2018	*
	Characterization of a glucose-tolerant beta-glucosidase from Anoxybacillus sp. DT3-1.	Chan CS, Sin LL, Chan KG, Shamsir MS, Manan FA, Sani RK, Goh KM	Biotechnol Biofuels	10.1186/s13068-016-0587-x	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67503

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28778

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112834

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405419.1 )

* These data were automatically processed and therefore are not curated

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