Name: Lactobacillus nasalidis YZ01
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160218

Type strain:

Species: Lactobacillus nasalidis

Strain Designation: YZ01

Culture col. no.: DSM 110539, JCM 33769

Strain history: K. Ushida; Chubu Univ., Japan; YZ01.

NCBI tax ID(s): 2797258 (species)

SI-ID 405797

DSM 110539

Special Collections

DSMZ
JCM

Section

Lactobacillus nasalidis YZ01 is a Gram-positive bacterium that was isolated from Probocis monkey, forestomach content.

Gram-positive
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lactobacillus*
	Species	**Lactobacillus nasalidis**
	Full Scientific Name (LPSN)	Lactobacillus nasalidis Suzuki-Hashido et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %94.389

[Ref.: #69480]	Motility	no Confidence in %96.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67122]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #67122]

Culture medium growth

[Ref.: #67122]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67122]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67122]			growth	37 °C
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67122]	Sample type/isolated from	Probocis monkey, forestomach content
[Ref.: #67122]	Geographic location (country and/or sea, region)	Yokohama city
[Ref.: #67122]	Country	Japan
[Ref.: #67122]	Country ISO 3 Code	JPN
[Ref.: #67122]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Forestomach of a captive proboscis monkey (Nasalis larvatus)
[Ref.: #67770]	Host species	Nasalis larvatus
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yokohama Zoo
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus nasalidis YZ01 gene for 16S ribosomal RNA, partial sequence	LC495593	1442	GenBank ENA	2797258 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus nasalidis YZ01	GCA_016587775	scaffold	GenBank ENA	2797258 tax ID
[Ref.: #66792]	Lactobacillus sp. YZ01	2797258.3	wgs	PATRIC	2797258 tax ID	*

[Ref.: #67770]

GC-content

51.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus sp. YZ01 PATRIC: 2797258.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	94.389	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	77.778	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	87.415	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	96.895	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.274	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	96.5	no

Availability in culture collections External links

[Ref.: #67122]

Culture collection no.

DSM 110539, JCM 33769

[Ref.: #112482]

SI-ID 405797

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus nasalidis sp. nov., isolated from the forestomach of a captive proboscis monkey (Nasalis larvatus).	Suzuki-Hashido N, Tsuchida S, Hayakawa T, Sakamoto M, Azumano A, Seino S, Matsuda I, Ohkuma M, Ushida K	Int J Syst Evol Microbiol	10.1099/ijsem.0.004787	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67122

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110539

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112482

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405797.1 )

* These data were automatically processed and therefore are not curated

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Lactobacillus sp. YZ01

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