Name: Hanstruepera ponticola L53
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159765

Type strain:

Species: Hanstruepera ponticola

Strain Designation: L53

Culture col. no.: KCTC 62247, MCCC 1H00246

NCBI tax ID(s): 2042995 (species)

Section

Hanstruepera ponticola L53 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from oyster sample.

colony-forming
Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Hanstruepera*
	Species	**Hanstruepera ponticola**
	Full Scientific Name (LPSN)	Hanstruepera ponticola (Park et al. 2018) Huang et al. 2022

	Synonym	Pseudobizionia ponticola
	Synonym	Hanstruepera crassostreae

Information on morphological and physiological properties Morphology

[Ref.: #66761]	Gram stain	negative

[Ref.: #66761]	Cell length	1-2.5 µm

[Ref.: #66761]	Cell width	0.2-0.4 µm

[Ref.: #66761]	Cell shape	rod-shaped

[Ref.: #66761]	Motility	no

[Ref.: #66761]	Colony size	1-2 mm
[Ref.: #66761]	Colony color	orange
[Ref.: #66761]	Colony shape	circular
[Ref.: #66761]	Incubation period	1 day
[Ref.: #66761]	Cultivation medium used	Marine agar (MA) 2216

[Ref.: #66761]	Pigment production	yes
[Ref.: #66761]	Pigment name	flexirubin-type
[Ref.: #66761]	Pigment production	yes
[Ref.: #66761]	Pigment name	caroteniod pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66761]

Culture medium

Marine agar (MA) 2216

[Ref.: #66761]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #66761]			optimum	33 °C
[Ref.: #66761]			growth	4-40 °C

[Ref.: #66761]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #66761]			optimum	7.5
[Ref.: #66761]			growth	6.5-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66761]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66761]		NaCl		growth	1-7	%(w/v)
[Ref.: #66761]		NaCl		optimum	3	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66761]	(S)-lactate ChEBI	-	carbon source
[Ref.: #66761]	1 % sodium lactate	-	carbon source
[Ref.: #66761]	2-oxobutanoate ChEBI	-	carbon source
[Ref.: #66761]	2-oxoglutarate ChEBI	-	carbon source
[Ref.: #66761]	3-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #66761]	3-O-methyl-D-glucose ChEBI	-	carbon source
[Ref.: #66761]	4-hydroxyphenylacetic acid ChEBI	-	carbon source
[Ref.: #66761]	acetic acid ChEBI	+	carbon source
[Ref.: #66761]	acetoacetate ChEBI	+	carbon source
[Ref.: #66761]	alginate ChEBI	-	hydrolysis
[Ref.: #66761]	alpha-D-glucose ChEBI	-	carbon source
[Ref.: #66761]	alpha-hydroxybutyrate	-	carbon source
[Ref.: #66761]	amygdalin ChEBI	-	builds acid from
[Ref.: #66761]	arbutin ChEBI	-	builds acid from
[Ref.: #66761]	aztreonam ChEBI	-	carbon source
[Ref.: #66761]	bromosuccinate ChEBI	-	carbon source
[Ref.: #66761]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #66761]	casein	+	hydrolysis
[Ref.: #66761]	cellobiose ChEBI	-	builds acid from
[Ref.: #66761]	cellobiose ChEBI	+	carbon source
[Ref.: #66761]	citric acid ChEBI	-	carbon source
[Ref.: #66761]	D-arabinose ChEBI	-	builds acid from
[Ref.: #66761]	D-arabitol ChEBI	-	builds acid from
[Ref.: #66761]	D-arabitol ChEBI	-	carbon source
[Ref.: #66761]	D-aspartate ChEBI	-	carbon source
[Ref.: #66761]	D-fructose ChEBI	-	builds acid from
[Ref.: #66761]	D-fructose ChEBI	+	carbon source
[Ref.: #66761]	D-fructose 6-phosphate ChEBI	-	carbon source
[Ref.: #66761]	D-fucose ChEBI	-	builds acid from
[Ref.: #66761]	D-fucose ChEBI	-	carbon source
[Ref.: #66761]	D-galactose ChEBI	-	builds acid from
[Ref.: #66761]	D-galactose ChEBI	+	carbon source
[Ref.: #66761]	D-galacturonic acid ChEBI	-	carbon source
[Ref.: #66761]	D-glucarate ChEBI	-	carbon source
[Ref.: #66761]	D-glucose ChEBI	-	builds acid from
[Ref.: #66761]	D-glucose 6-phosphate ChEBI	-	carbon source
[Ref.: #66761]	D-glucuronate ChEBI	-	carbon source
[Ref.: #66761]	D-lyxose ChEBI	-	builds acid from
[Ref.: #66761]	D-malate ChEBI	-	carbon source
[Ref.: #66761]	D-mannitol ChEBI	-	builds acid from
[Ref.: #66761]	D-mannitol ChEBI	-	carbon source
[Ref.: #66761]	D-mannose ChEBI	-	builds acid from
[Ref.: #66761]	D-mannose ChEBI	-	carbon source
[Ref.: #66761]	D-ribose ChEBI	+	builds acid from
[Ref.: #66761]	D-serine ChEBI	-	carbon source
[Ref.: #66761]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #66761]	D-sorbitol ChEBI	-	carbon source
[Ref.: #66761]	D-tagatose ChEBI	+	builds acid from
[Ref.: #66761]	D-trehalose ChEBI	+	carbon source
[Ref.: #66761]	D-xylose ChEBI	-	builds acid from
[Ref.: #66761]	dextrin ChEBI	-	carbon source
[Ref.: #66761]	erythritol ChEBI	-	builds acid from
[Ref.: #66761]	esculin ferric citrate	-	builds acid from
[Ref.: #66761]	formate ChEBI	-	carbon source
[Ref.: #66761]	fusidate ChEBI	-	carbon source
[Ref.: #66761]	galactarate ChEBI	-	carbon source
[Ref.: #66761]	galactitol ChEBI	-	builds acid from
[Ref.: #66761]	gamma-aminobutyric acid ChEBI	-	carbon source
[Ref.: #66761]	gelatin ChEBI	-	carbon source
[Ref.: #66761]	gentiobiose ChEBI	-	builds acid from
[Ref.: #66761]	gentiobiose ChEBI	+	carbon source
[Ref.: #66761]	glucuronamide ChEBI	-	carbon source
[Ref.: #66761]	glycerol ChEBI	-	builds acid from
[Ref.: #66761]	glycerol ChEBI	-	carbon source
[Ref.: #66761]	glycine-proline ChEBI	-	carbon source
[Ref.: #66761]	glycogen ChEBI	-	builds acid from
[Ref.: #66761]	inosine ChEBI	-	carbon source
[Ref.: #66761]	inulin ChEBI	-	builds acid from
[Ref.: #66761]	L-alanine ChEBI	-	carbon source
[Ref.: #66761]	L-arabinose ChEBI	-	builds acid from
[Ref.: #66761]	L-arabitol ChEBI	-	builds acid from
[Ref.: #66761]	L-arginine ChEBI	-	carbon source
[Ref.: #66761]	L-aspartate ChEBI	-	carbon source
[Ref.: #66761]	L-fucose ChEBI	-	builds acid from
[Ref.: #66761]	L-fucose ChEBI	-	carbon source
[Ref.: #66761]	L-galactonic acid gamma-lactone ChEBI	-	carbon source
[Ref.: #66761]	L-glutamate ChEBI	+	carbon source
[Ref.: #66761]	L-histidine ChEBI	-	carbon source
[Ref.: #66761]	L-malate ChEBI	-	carbon source
[Ref.: #66761]	L-pyroglutamic acid ChEBI	-	carbon source
[Ref.: #66761]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #66761]	L-rhamnose ChEBI	-	carbon source
[Ref.: #66761]	L-serine ChEBI	-	carbon source
[Ref.: #66761]	L-sorbose ChEBI	-	builds acid from
[Ref.: #66761]	L-xylose ChEBI	-	builds acid from
[Ref.: #66761]	lactose ChEBI	-	builds acid from
[Ref.: #66761]	lactose ChEBI	-	carbon source
[Ref.: #66761]	lithium chloride ChEBI	-	carbon source
[Ref.: #66761]	maltose ChEBI	-	builds acid from
[Ref.: #66761]	maltose ChEBI	+	carbon source
[Ref.: #66761]	melezitose ChEBI	-	builds acid from
[Ref.: #66761]	melibiose ChEBI	-	builds acid from
[Ref.: #66761]	melibiose ChEBI	+	carbon source
[Ref.: #66761]	methyl (R)-lactate ChEBI	-	carbon source
[Ref.: #66761]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #66761]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #66761]	methyl beta-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #66761]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #66761]	methyl pyruvate ChEBI	-	carbon source
[Ref.: #66761]	myo-inositol ChEBI	-	builds acid from
[Ref.: #66761]	myo-inositol ChEBI	+	carbon source
[Ref.: #66761]	N-acetyl-D-mannosamine ChEBI	+	carbon source
[Ref.: #66761]	N-acetylgalactosamine ChEBI	+	carbon source
[Ref.: #66761]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #66761]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #66761]	n-acetylneuraminate ChEBI	-	carbon source
[Ref.: #66761]	nalidixic acid ChEBI	-	carbon source
[Ref.: #66761]	nitrate ChEBI	-	reduction
[Ref.: #66761]	pectin ChEBI	-	carbon source
[Ref.: #66761]	potassium 2-dehydro-D-gluconate	-	builds acid from
[Ref.: #66761]	potassium 5-dehydro-D-gluconate	+	builds acid from
[Ref.: #66761]	potassium gluconate ChEBI	-	builds acid from
[Ref.: #66761]	potassium tellurite ChEBI	-	carbon source
[Ref.: #66761]	propionate ChEBI	+	carbon source
[Ref.: #66761]	quinate ChEBI	-	carbon source
[Ref.: #66761]	raffinose ChEBI	-	builds acid from
[Ref.: #66761]	raffinose ChEBI	-	carbon source
[Ref.: #66761]	ribitol ChEBI	-	builds acid from
[Ref.: #66761]	salicin ChEBI	-	builds acid from
[Ref.: #66761]	salicin ChEBI	-	carbon source
[Ref.: #66761]	sodium bromate ChEBI	-	carbon source
[Ref.: #66761]	sodium butyrate ChEBI	-	carbon source
[Ref.: #66761]	stachyose ChEBI	+	carbon source
[Ref.: #66761]	starch ChEBI	-	builds acid from
[Ref.: #66761]	starch ChEBI	+	hydrolysis
[Ref.: #66761]	sucrose ChEBI	-	builds acid from
[Ref.: #66761]	sucrose ChEBI	+	carbon source
[Ref.: #66761]	trehalose ChEBI	-	builds acid from
[Ref.: #66761]	turanose ChEBI	-	builds acid from
[Ref.: #66761]	turanose ChEBI	+	carbon source
[Ref.: #66761]	tween 20 ChEBI	+	hydrolysis
[Ref.: #66761]	tween 40 ChEBI	-	carbon source
[Ref.: #66761]	tween 40 ChEBI	+	hydrolysis
[Ref.: #66761]	tween 60 ChEBI	+	hydrolysis
[Ref.: #66761]	tween 80 ChEBI	-	hydrolysis
[Ref.: #66761]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #66761]	ampicillin ChEBI	yes	10	µg (disc)
[Ref.: #66761]	cefotaxime ChEBI	yes	30	µg (disc)
[Ref.: #66761]	erythromycin ChEBI	yes	15	µg (disc)
[Ref.: #66761]	gentamicin ChEBI				yes	10	µg (disc)
[Ref.: #66761]	kanamycin ChEBI				yes	30	µg (disc)
[Ref.: #66761]	lincomycin ChEBI	yes	2	µg (disc)
[Ref.: #66761]	nalidixic acid ChEBI				yes	30	µg (disc)
[Ref.: #66761]	neomycin ChEBI				yes	30	µg (disc)
[Ref.: #66761]	norfloxacin ChEBI	yes	30	µg (disc)
[Ref.: #66761]	ofloxacin ChEBI	yes	5	µg (disc)
[Ref.: #66761]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #66761]	spiramycin II ChEBI	yes	30	µg (disc)
[Ref.: #66761]	streptomycin ChEBI				yes	10	µg (disc)
[Ref.: #66761]	tetracycline ChEBI				yes	30	µg (disc)
[Ref.: #66761]	tobramycin ChEBI				yes	10	µg (disc)
[Ref.: #66761]	trimethoprim ChEBI				yes	10	µg (disc)
[Ref.: #66761]	vancomycin ChEBI	yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66761]		hydrogen sulfide ChEBI	no
[Ref.: #66761]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #66761]	acid phosphatase	+	3.1.3.2
[Ref.: #66761]	alkaline phosphatase	+	3.1.3.1
[Ref.: #66761]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #66761]	alpha-fucosidase	-	3.2.1.51
[Ref.: #66761]	alpha-galactosidase	-	3.2.1.22
[Ref.: #66761]	alpha-glucosidase	-	3.2.1.20
[Ref.: #66761]	alpha-mannosidase	-	3.2.1.24
[Ref.: #66761]	arginine dihydrolase	+	3.5.3.6
[Ref.: #66761]	beta-galactosidase	-	3.2.1.23
[Ref.: #66761]	beta-glucosidase	-	3.2.1.21
[Ref.: #66761]	beta-glucuronidase	-	3.2.1.31
[Ref.: #66761]	catalase	+	1.11.1.6
[Ref.: #66761]	cystine arylamidase	-	3.4.11.3
[Ref.: #66761]	cytochrome oxidase	+	1.9.3.1
[Ref.: #66761]	esterase (C 4)	+
[Ref.: #66761]	esterase Lipase (C 8)	+
[Ref.: #66761]	gelatinase	+
[Ref.: #66761]	leucine arylamidase	+	3.4.11.1
[Ref.: #66761]	lipase (C 14)	-
[Ref.: #66761]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #66761]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66761]	trypsin	+	3.4.21.4
[Ref.: #66761]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #66761]

Fatty acid	Percentage
C15:0 iso	45.5
C17:0 iso 3OH	19.5
C15:0 iso G	19.2
C15:0 iso 3OH	5.8
C16:1 w7c and/or C16:1 w6c	2.8
C16:0	1.5
C17:1 iso w9c / C16:0 10-methyl	1
C18:1 w9c	1
C17:0 iso	0.8
C16:0 iso 3OH	0.6
C18:0	0.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66761]	Sample type/isolated from	oyster sample
[Ref.: #66761]	Geographic location (country and/or sea, region)	Weihai
[Ref.: #66761]	Country	China
[Ref.: #66761]	Country ISO 3 Code	CHN
[Ref.: #66761]	Continent	Asia
[Ref.: #66761]	Geographic location	37.5200°/122.0300°
[Ref.: #66761]	Enrichment culture	marine agar 2216
[Ref.: #66761]	Enrichment culture duration	7 days
[Ref.: #66761]	Enrichment culture temperature	28 ̊C
[Ref.: #66761]	Isolation/enrichment procedure	0.1 ml of homogenized oyster tissue was spread on marine agar 2216 plates and incubated for 7 days at 28°C under aerobic condition.
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Mollusca

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66761]	Hanstruepera sp. strain L53 16S ribosomal RNA gene, partial sequence	MG437306	1490	ENA	2071625 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Hanstruepera crassostreae L53	2831748538	draft	JGI IMG/M	2071625 tax ID	*

[Ref.: #66761]

GC-content

33.5 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #66761]

Culture collection no.

KCTC 62247, MCCC 1H00246

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Hanstruepera crassostreae sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from an oyster.	He RH, Liang QY, Zhao JX, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003053	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66761

Rui-Han He, Qi-Yun Liang, Jin-Xin Zhao, Zong-Jun Du: Hanstruepera crassostreae sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from an oyster. IJSEM 68: 3647 - 3651 2018 ( DOI 10.1099/ijsem.0.003053 , PubMed 30303476 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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