Lactobacillus porci (DSM 105804, Bifido-178-WT-2B)

Name: Lactobacillus porci (DSM 105804, Bifido-178-WT-2B)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159650

Type strain

Strain Designation Bifido-178-WT-2B

Culture col. no. DSM 105804 Bifido-178-WT-2B

NCBI tax ID(s) 2012477

Special Collections DSMZ Pig DZIF

History DSMZ <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; Bifido-178-WT-2B

Links

Lactobacillus porci Bifido-178-WT-2B is a bacterium that was isolated from pig, WT, 3 months old, feces.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 407088

DSM 105804

@ref 20215

Last LPSN update 2026-05-29 08:44:14

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactobacillus

Species Lactobacillus porci

Full scientific name Lactobacillus porci Kim et al. 2018

BacDive ID	Other strains from **Lactobacillus porci** (1)	Type strain
159748	L. porci KCTC 21090, NBRC 112917, SG 816 (type strain)

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		93.5
125438		93.425	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66500	MRS MEDIUM (DSMZ Medium 11)		Medium recipe at MediaDive	Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66500	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate anaerobe	98.568

Spore formation

@ref	Spore formation	Confidence
125439		99.606

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66500	pig, WT, 3 months old, feces	Kranzberg (Bavaria)	Germany	DEU	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM969598v1 assembly for Lactobacillus porci Bifido-178-WT-2B	contig	GCA_009695985	2012477.3	3004808570	2012477	62.52

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66500	Lactobacillus porci strain DSM 105804 16S ribosomal RNA gene, partial sequence	MN537497	1370		2012477

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM969598v1 assembly for Lactobacillus porci Bifido-178-WT-2B
BV-BRC: 2012477.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	55.64	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	98.57	no
125439	motility	BacteriaNetⓘ	no	81.52	no
125439	spore_formation	BacteriaNetⓘ	no	99.61	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus porci strain Bifido-178-WT-2B
PATRIC: 2012477.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.43	no
125438	anaerobic	anaerobicⓘ	no	75.86	no
125438	spore-forming	spore-formingⓘ	no	86.59	no
125438	aerobic	aerobicⓘ	no	96.41	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	93.50	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66500	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105804
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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