Name: Streptomyces triticisoli NEAU-DSCPA1-4-4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 159651

Type strain:

Species: Streptomyces triticisoli

Strain Designation: NEAU-DSCPA1-4-4

Culture col. no.: DSM 105118, CCTCC AA 2017025

Strain history: <- J. Zhao; School of Life Science, Harbin, P.R. CHINA; NEAU-DSCPA1-4-4<-C. Han; School of Life Science, Northease Agricultural University

NCBI tax ID(s): 2182797 (species)

SI-ID 398093

DSM 105118

Special Collections

Section

When using BacDive for research please cite our paper

Streptomyces triticisoli NEAU-DSCPA1-4-4 is an aerobe, spore-forming, mesophilic bacterium that builds a substrate hyphae and aerial mycelium and was isolated from Soil.

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces triticisoli**
	Full Scientific Name (LPSN)	Streptomyces triticisoli Tian et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66710]	Gram stain	positive
[Ref.: #125439]	Gram stain	positive Confidence in %99.9

[Ref.: #66710]	Motility	no
[Ref.: #125439]	Motility	no Confidence in %92.8

[Ref.: #66710]	Multicellular complex forming ability	yes
[Ref.: #66710]	Multicellular complex name	substrate hyphae and aerial mycelium
[Ref.: #66710]	Medium Name (multicellularity)	ISP 1, ISP 3

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

Bennett's agar

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Culture medium growth

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Culture medium

ISP 1

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Culture medium

ISP 2

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Culture medium

ISP 3

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Culture medium

ISP 4

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ISP 5

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ISP 6

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Culture medium

ISP 7

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

Czapek's agar

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Culture medium

Nutrient agar (NA)

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Culture medium growth

		Temperature
[Ref.: #66501]	growth	28 °C
[Ref.: #66710]	optimum	28 °C
[Ref.: #66710]	growth	10-40 °C

	pH	Kind of pH		pH
[Ref.: #66710]			optimum	7
[Ref.: #66710]			growth	5-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66710]	Oxygen tolerance	aerobe
[Ref.: #125439]	Oxygen tolerance	obligate aerobe Confidence in %99.4

[Ref.: #66710]	Spore description	long spore chains with warty surfaced spores
[Ref.: #66710]	Type of spore	spore
[Ref.: #66710]	Ability of spore formation	yes
[Ref.: #125439]	Ability of spore formation	yes Confidence in %96.2

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66710]		NaCl		growth	6	%(w/v)

[Ref.: #66710]	Observation	predominant menaquinones are MK-9(H 8) and MK-9(H 6)
[Ref.: #66710]	Observation	lipid profile consists of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol mannoside and three unidentified phospholipids

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66710]	cellulose ChEBI	-	hydrolysis
[Ref.: #66710]	creatine ChEBI	+	nitrogen source
[Ref.: #66710]	D-fructose ChEBI	+	carbon source
[Ref.: #66710]	D-galactose ChEBI	+	carbon source
[Ref.: #66710]	D-glucose ChEBI	+	carbon source
[Ref.: #66710]	D-mannitol ChEBI	+	carbon source
[Ref.: #66710]	D-mannose ChEBI	+	carbon source
[Ref.: #66710]	D-ribose ChEBI	+	carbon source
[Ref.: #66710]	D-sorbitol ChEBI	+	carbon source
[Ref.: #66710]	D-xylose ChEBI	+	carbon source
[Ref.: #66710]	esculin ChEBI	+	hydrolysis
[Ref.: #66710]	glycine ChEBI	-	nitrogen source
[Ref.: #66710]	hydrogen sulfide ChEBI	-	assimilation
[Ref.: #66710]	L-alanine ChEBI	+	nitrogen source
[Ref.: #66710]	L-arabinose ChEBI	+	carbon source
[Ref.: #66710]	L-arginine ChEBI	+	nitrogen source
[Ref.: #66710]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #66710]	L-aspartate ChEBI	+	nitrogen source
[Ref.: #66710]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #66710]	L-glutamine ChEBI	+	nitrogen source
[Ref.: #66710]	L-proline ChEBI	-	nitrogen source
[Ref.: #66710]	L-rhamnose ChEBI	+	carbon source
[Ref.: #66710]	L-serine ChEBI	+	nitrogen source
[Ref.: #66710]	L-threonine ChEBI	+	nitrogen source
[Ref.: #66710]	L-tyrosine ChEBI	-	nitrogen source
[Ref.: #66710]	maltose ChEBI	+	carbon source
[Ref.: #66710]	myo-inositol ChEBI	+	carbon source
[Ref.: #66710]	nitrate ChEBI	+	reduction
[Ref.: #66710]	raffinose ChEBI	-	carbon source
[Ref.: #66710]	starch ChEBI	+	hydrolysis
[Ref.: #66710]	sucrose ChEBI	+	carbon source
[Ref.: #66710]	tween 20 ChEBI	-	degradation
[Ref.: #66710]	tween 40 ChEBI	+	hydrolysis
[Ref.: #66710]	tween 80 ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #66710]		gelatinase	+
[Ref.: #66710]		urease	+	3.5.1.5

Fatty acid profile

Metadata FA analysis

Reference

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Fatty acid	Percentage
C16:0 iso	32.6
C14:0 iso	14.9
C16:0	14.6
C18:0	12
C15:0 anteiso	9.8
C17:0 anteiso	5.7
C16:1 w7c	5.5
C15:0	2.8
C17:0 iso	0.7
C17:1 w7c	0.7
C17:0	0.7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66501]	Sample type/isolated from	Soil
[Ref.: #66501]	Geographic location (country and/or sea, region)	Zhumadian, Henan province (32° 98' N 114° 02' E)
[Ref.: #66501]	Country	China
[Ref.: #66501]	Country ISO 3 Code	CHN
[Ref.: #66501]	Continent	Asia
[Ref.: #66501]	Geographic location	32.9833°/114.0330°

[Ref.: #66710]	Sample type/isolated from	rhizosphere soil of wheat
[Ref.: #66710]	Geographic location (country and/or sea, region)	ZhuMadian, Henan
[Ref.: #66710]	Country	China
[Ref.: #66710]	Country ISO 3 Code	CHN
[Ref.: #66710]	Continent	Asia
[Ref.: #66710]	Geographic location	34.4833°/113.0330°
[Ref.: #66710]	Enrichment culture	Gause's synthetic agar no. 1
[Ref.: #66710]	Enrichment culture composition	supplemented with cycloheximide (50 mg/L) and nalidixic acid (20 mg/L)
[Ref.: #66710]	Enrichment culture duration	21 days
[Ref.: #66710]	Enrichment culture temperature	28 ̊C
[Ref.: #66710]	Isolation/enrichment procedure	soil sample was air-dried at room temperature for 14 days before isolation. After drying, 5 g soil sample was mixed with 45 ml distilled water and followed by shaking on a rotary shaker at 250 r.p.m., 28 C for 30 min. Then a 200 µl sample of the suspension was spread on a plate of Gause's synthetic agar no. 1
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66710]	Streptomyces triticisoli strain NEAU DSCPA1-4-4 16S ribosomal RNA gene, partial sequence	MF993053	1519	GenBank ENA	2182797 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces triticisoli NEAU-DSCPA1-4-4	GCA_003270085	contig	GenBank ENA	2182797 tax ID	*
[Ref.: #66792]	Streptomyces triticisoli NEAU-DSCPA1-4-4	2862233620	draft	JGI IMG/M	2182797 tax ID	*

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GC-content

71.3 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces triticisoli NEAU-DSCPA1-4-4 NCBI: GCA_003270085
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	yes	96.2
[Ref.: #125439]	BacteriaNet	motilityⓘ	no	92.8
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	positive	99.9
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	99.4

Availability in culture collections External links

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Culture collection no.

DSM 105118, CCTCC AA 2017025

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SI-ID 398093

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces triticisoli sp. nov., a novel actinomycete isolated from rhizosphere soil of wheat (Triticum aestivum L.).	Tian Y, Han C, Zhao J, Shi H, Hu J, Jiang S, Han X, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.002993	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66501

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105118

#66710

Yuanyuan Tian, Chuanyu Han, Junwei Zhao, Haoran Shi, Jiangmeihui Hu, Shanwen Jiang, Xiaoyang Han, Xiangjing Wang, Wensheng Xiang: Streptomyces triticisoli sp. nov., a novel actinomycete isolated from rhizosphere soil of wheat (Triticum aestivum L.). IJSEM 68: 3327 - 3332 2018 ( DOI 10.1099/ijsem.0.002993 , PubMed 30141768 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112125

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398093.1 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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