Name: Streptomyces caeni HA15955
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159648

Type strain:

Species: Streptomyces caeni

Strain Designation: HA15955

Culture col. no.: DSM 105693, CGMCC 4.7426

Strain history: <- H. Huang, Chinese Acad. Tropical Agricult. Sci., Haikou, China; HA15955

NCBI tax ID(s): 2307231 (species)

Section

Streptomyces caeni HA15955 is an aerobe, spore-forming, mesophilic bacterium that forms filamentous colonies and was isolated from mangrove mud.

colony-forming
Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	Streptomycetales
	Family	Streptomycetaceae
	Genus	*Streptomyces*
	Species	**Streptomyces caeni**
	Full Scientific Name (PNU)	Streptomyces caeni Huang et al. 2018

Information on morphological and physiological properties Morphology

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Gram stain

positive

[Ref.: #66648]	Colony color	greyish withe
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 1 agar

[Ref.: #66648]	Colony color	greyish white
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 2 agar

[Ref.: #66648]	Colony color	greyish white
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 4 agar

[Ref.: #66648]	Colony color	greyish white
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 5 agar

[Ref.: #66648]	Colony color	creamy yellow
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 6 agar

[Ref.: #66648]	Colony color	greyish
[Ref.: #66648]	Colony shape	filamentous
[Ref.: #66648]	Incubation period	14 days
[Ref.: #66648]	Cultivation medium used	ISP 7 agar

Multimedia content

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Caption:

Medium 252 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

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Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

expand / minimize

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Culture medium

ISP 1 agar

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Culture medium growth

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Culture medium

ISP 2 agar

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Culture medium growth

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Culture medium

ISP 4 agar

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Culture medium growth

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Culture medium

ISP 5 agar

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Culture medium growth

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Culture medium

ISP 6 agar

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Culture medium growth

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Culture medium

ISP 7 agar

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Culture medium growth

		Temperature
[Ref.: #66498]	growth	28 °C
[Ref.: #66648]	optimum	28 °C
[Ref.: #66648]	growth	20-37 °C

[Ref.: #66498]	Temperature range	mesophilic
[Ref.: #66648]	Temperature range	mesophilic

	pH	Kind of pH		pH	pH range
[Ref.: #66648]			optimum	7-8
[Ref.: #66648]			growth	5-10	alkaliphile

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #66648]	Spore description	cylindrical in shape with smooth surfaces
[Ref.: #66648]	Type of spore	spore
[Ref.: #66648]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66648]		NaCl		growth	0-5	%(w/v)
[Ref.: #66648]		NaCl		optimum	1	%(w/v)

[Ref.: #66648]	Observation	forms creamy yellow to brown substrate mycelium and greyish-white to greyish-yellow aerial hyphae that differentiate into straight to spiral chains.
[Ref.: #66648]	Observation	No diffusible pigments were produced.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66648]	cellobiose ChEBI	+	carbon source
[Ref.: #66648]	D-fructose ChEBI	-	carbon source
[Ref.: #66648]	D-mannitol ChEBI	+	carbon source
[Ref.: #66648]	D-mannose ChEBI	+	carbon source
[Ref.: #66648]	D-rhamnose ChEBI	+	carbon source
[Ref.: #66648]	D-ribose ChEBI	-	carbon source
[Ref.: #66648]	dextrin ChEBI	+	carbon source
[Ref.: #66648]	gelatin ChEBI	-	degradation
[Ref.: #66648]	glucose ChEBI	+	carbon source
[Ref.: #66648]	glycerol ChEBI	+	carbon source
[Ref.: #66648]	L-arabinose ChEBI	-	carbon source
[Ref.: #66648]	L-fucose ChEBI	-	carbon source
[Ref.: #66648]	maltose ChEBI	+	carbon source
[Ref.: #66648]	milk	-	degradation
[Ref.: #66648]	myo-inositol ChEBI	-	carbon source
[Ref.: #66648]	nitrate ChEBI	-	reduction
[Ref.: #66648]	raffinose ChEBI	+	carbon source
[Ref.: #66648]	salicin ChEBI	-	carbon source
[Ref.: #66648]	sorbic acid ChEBI	-	carbon source
[Ref.: #66648]	sucrose ChEBI	+	carbon source
[Ref.: #66648]	trehalose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #66648]		hydrogen sulfide ChEBI
[Ref.: #66648]		melanin ChEBI

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66498]	Sample type/isolated from	mangrove mud
[Ref.: #66498]	Geographic location (country and/or sea, region)	Sanya (18° 16' 44.7'' N, 109° 27' 27.1'' E)
[Ref.: #66498]	Country	China
[Ref.: #66498]	Country ISO 3 Code	CHN
[Ref.: #66498]	Continent	Asia
[Ref.: #66498]	Geographic location	18.2791°/109.4580°

[Ref.: #66648]	Sample type/isolated from	mangrove mud sample
[Ref.: #66648]	Geographic location (country and/or sea, region)	Sanya
[Ref.: #66648]	Country	China
[Ref.: #66648]	Country ISO 3 Code	CHN
[Ref.: #66648]	Continent	Asia
[Ref.: #66648]	Geographic location	18.2791°/109.4580°
[Ref.: #66648]	Enrichment culture	ISP4
[Ref.: #66648]	Enrichment culture composition	made with 70 % aged seawater in distilled water (instead of pure distilled water), and supplemented with cycloheximide (25 mg ml-1), potassium dichromate (50 mg ml-1) and nystatin (50 mg ml-1)
[Ref.: #66648]	Enrichment culture duration	7 days
[Ref.: #66648]	Enrichment culture temperature	28 ̊C
[Ref.: #66648]	Isolation/enrichment procedure	10 g sediment samples were heated at 55°C for 6 min, then suspended in 100 ml sterile aged seawater and stirred for 30 min. The liquid was plated on inorganic salts/starch [International Streptomyces Project (ISP) 4] using a tenfold dilution series methodand incubated at 28°C for 7 days.
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Mangrove
#Environmental	#Aquatic	#Sediment
#Host	#Plants	#Tree

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66498]	Streptomyces sp. strain HA15955 16S ribosomal RNA gene, partial sequence	KX090569	1489	ENA	2307231 tax ID

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GC-content

71.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 105693, CGMCC 4.7426

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces caeni sp. nov., isolated from mangrove mud.	Huang H, Liu M, Zhong W, Mo K, Zhu J, Zou X, Hu Y, Bao S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002916	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66498

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105693

#66648

Huiqin Huang, Min Liu, Weida Zhong, Kunlian Mo, Jun Zhu, Xiaoxiao Zou, Yonghua Hu, Shixiang Bao: Streptomyces caeni sp. nov., isolated from mangrove mud. IJSEM 68: 3080 - 3083 2018 ( DOI 10.1099/ijsem.0.002916 , PubMed 30152750 )

* These data were automatically processed and therefore are not curated

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