Mycoplasma procyoni LR5794 is a facultative anaerobe bacterium that forms fried-egg-shaped colonies and was isolated from oral cavity of raccoon .
colony-forming facultative anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Mycoplasmatota |
| Class Mollicutes |
| Order Mycoplasmatales |
| Family Mycoplasmataceae |
| Genus Mycoplasma |
| Species Mycoplasma procyoni |
| Full scientific name Mycoplasma procyoni Volokhov et al. 2020 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 66375 | SP4-Z MEDIUM (DSMZ Medium 1076b) | Medium recipe at MediaDive | Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | Enrichment culture | Enrichment culture composition | Enrichment culture duration | Enrichment culture temperature | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66375 | oral cavity of raccoon (Procyon lotor) | Procyon lotor | Ontario, Guelph | Canada | CAN | North America | 43.549 | -80.25 43.549/-80.25 | |||||
| 68267 | oral cavity of raccoon (Procyon lotor) | USA | USA | North America | PPLO broth | containing glucose and penicillin (1.5-2 mg/mL) | 1-2 weeks | 36 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1705259v1 assembly for Mycoplasma procyoni LR5794 | contig | 568784 | 73.83 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 66375 | Mycoplasma procyoni strain LR5794 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | FJ226566 | 1634 | 568784 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 68267 | 35.33 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 63.03 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 85.21 | yes |
| 125438 | aerobic | aerobicⓘ | no | 86.86 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 96.41 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.99 | no |
| 125438 | flagellated | motile2+ⓘ | no | 96.06 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Notification List of Bacterial Strains Made Available by the United Kingdom National Collection of Type Cultures in 2021. | Turnbull JD, Dicks J, Gurung S, McGregor H, NCTC 2021 Depositors Cohort, Alexander S. | Microbiol Resour Announc | 10.1128/mra.00357-22 | 2022 | ||
| Phylogeny | Acholeplasma equirhinis sp. nov. isolated from respiratory tract of horse (Equus caballus) and Mycoplasma procyoni sp. nov. isolated from oral cavity of raccoon (Procyon lotor). | Volokhov DV, Gao Y, Davidson MK, Chizhikov VE | Arch Microbiol | 10.1007/s00203-019-01786-x | 2019 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66375 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106703 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68267 | Dmitriy V. Volokhov, Yamei Gao, Maureen K. Davidson & Vladimir E. Chizhikov: Acholeplasma equirhinis sp. nov. isolated from respiratory tract of horse (Equus caballus) and Mycoplasma procyoni sp. nov. isolated from oral cavity of raccoon (Procyon lotor). Arch Microbiol 202: 411 - 420 2020 ( DOI 10.1007/s00203-019-01786-x ) |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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