Name: Zhaonella formicivorans K32
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159491

Type strain:

Species: Zhaonella formicivorans

Strain Designation: K32

Culture col. no.: DSM 107278, CCAM 584, CGMCC 1.5297

Strain history: <- X. LV, Biogas Inst. of Ministry of Agriculture, Chengdu, P.R. China; K32 <- L. Dai

NCBI tax ID(s): 2528593 (species)

SI-ID 405631

DSM 107278

Section

Zhaonella formicivorans K32 is an anaerobe, spore-forming, thermophilic bacterium that was isolated from Oil samples.

motile
spore-forming
anaerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Zhaonellaceae*
	Genus	*Zhaonella*
	Species	**Zhaonella formicivorans**
	Full Scientific Name (LPSN)	Zhaonella formicivorans Lv et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %99.09

[Ref.: #69480]	Motility	yes Confidence in %98.373

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66314]

Culture medium

PY + X MEDIUM (DSMZ Medium 104b)

[Ref.: #66314]

Culture medium growth

[Ref.: #66314]

Culture medium link

Medium recipe at MediaDive

[Ref.: #66314]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66314]			growth	55 °C

[Ref.: #66314]	Temperature range	thermophilic
[Ref.: #69480]	Temperature range	thermophilic Confidence in %100

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %99.999

[Ref.: #69480]	Ability of spore formation	yes Confidence in %100
[Ref.: #69481]	Ability of spore formation	yes Confidence in %99

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66314]	Sample type/isolated from	Oil samples
[Ref.: #66314]	Geographic location (country and/or sea, region)	Dong Ying , Shan Dong
[Ref.: #66314]	Country	China
[Ref.: #66314]	Country ISO 3 Code	CHN
[Ref.: #66314]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered

#Contamination

#Oil (Fuel)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MK558696 (>99% sequence identity) for Thermoanaerobacteraceae from Microbeatlas

Aquatic Samples	328
Soil Samples	135
Animal Samples	96
Plant Samples	19
Total Samples	578

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66314]	Clostridia bacterium k32 16S ribosomal RNA gene, partial sequence	MK558696	1428	ENA	2528593 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Zhaonella formicivorans K32	GCA_004353525	complete	GenBank	2528593 tax ID	*

[Ref.: #66314]

GC-content

46.3 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Zhaonella formicivorans k32 NCBI: GCA_004353525.2
[Ref.: #69481]	spore-forming	yes	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Zhaonella formicivorans k32 NCBI: GCA_004353525.1
[Ref.: #69480]	motile	yes	81.65	no
[Ref.: #69480]	flagellated	no	86.498	no
[Ref.: #69480]	gram-positive	no	81.028	no
[Ref.: #69480]	anaerobic	yes	98.482	no
[Ref.: #69480]	aerobic	no	93.609	no
[Ref.: #69480]	halophile	no	93.409	no
[Ref.: #69480]	spore-forming	yes	82.831	no
[Ref.: #69480]	glucose-util	yes	68.442	no
[Ref.: #69480]	thermophile	yes	88.714	yes
[Ref.: #69480]	glucose-ferment	no	73.342	no
[Ref.: #69480]	motile	yes	81.65	no
[Ref.: #69480]	flagellated	no	86.498	no
[Ref.: #69480]	gram-positive	no	81.028	no
[Ref.: #69480]	anaerobic	yes	98.482	no
[Ref.: #69480]	aerobic	no	93.609	no
[Ref.: #69480]	halophile	no	93.409	no
[Ref.: #69480]	spore-forming	yes	82.831	no
[Ref.: #69480]	glucose-util	yes	68.442	no
[Ref.: #69480]	thermophile	yes	88.714	yes
[Ref.: #69480]	glucose-ferment	no	73.342	no

Availability in culture collections External links

[Ref.: #66314]

Culture collection no.

DSM 107278, CCAM 584, CGMCC 1.5297

[Ref.: #111980]

SI-ID 405631

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Zhaonella formicivorans gen. nov., sp. nov., an anaerobic formate-utilizing bacterium isolated from Shengli oilfield, and proposal of four novel families and Moorellales ord. nov. in the phylum Firmicutes.	Lv XM, Yang M, Dai LR, Tu B, Chang C, Huang Y, Deng Y, Lawson PA, Zhang H, Cheng L, Tang YQ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004178	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66314

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107278

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#111980

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405631.1 )

* These data were automatically processed and therefore are not curated

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Zhaonella formicivorans k32

Zhaonella formicivorans k32

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