Victivallis vadensis (DSM 107450, COR2-253-APC-1A)

Name: Victivallis vadensis (DSM 107450, COR2-253-APC-1A)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159431

Type strain

Strain Designation COR2-253-APC-1A

Culture col. no. DSM 107450 COR2-253-APC-1A

NCBI tax ID(s) 172901

Special Collections DSMZ Pig DZIF

History DSMZ <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; COR2-253-APC-1A

Links

Victivallis vadensis COR2-253-APC-1A is a bacterium that was isolated from feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400310

DSM 107450

@ref 20215

Last LPSN update 2026-05-29 08:44:11

Domain Bacteria

Phylum Lentisphaerota

Class Lentisphaeria

Order Victivallales

Family Victivallaceae

Genus Victivallis

Species Victivallis vadensis

Full scientific name Victivallis vadensis Zoetendal et al. 2003

BacDive ID	Other strains from **Victivallis vadensis** (1)	Type strain
17370	V. vadensis Cello, DSM 14823, ATCC BAA-548, CCUG 54625 (type strain)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	92.875

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66254	GAM Broth (Gifu Anaerobic Medium Broth) (DSMZ Medium 1713)		Medium recipe at MediaDive	Name: GAM Broth (Gifu Anaerobic Medium Broth) (DSMZ Medium 1713) Composition: GAM Broth powder 59.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66254	positive	growth	37

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	+	3.2.1.51	from API rID32A
68380	alpha-galactosidase	+	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
66254	-	-	+	+	-	-	+	-	-	+	-	-	-	+	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66254	feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein	Kranzberg (Bavaria)	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
66254	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1284330v1 assembly for Victivallis vadensis COR2-253-APC-1A	contig	GCA_012843305	172901.91	8063613053	172901	42.18

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66254	Victivallis vadensis strain DSM 107450 16S ribosomal RNA gene, partial sequence	MN537538	1458		172901

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Victivallis vadensis COR2-253-APC-1A
NCBI: GCA_012843305.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	92.88	no
125438	anaerobic	anaerobicⓘ	yes	86.22	no
125438	aerobic	aerobicⓘ	no	90.72	no
125438	spore-forming	spore-formingⓘ	no	84.71	no
125438	thermophilic	thermophileⓘ	no	92.27	yes
125438	flagellated	motile2+ⓘ	no	80.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66254	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107450
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68380	Automatically annotated from API rID32A .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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