Name: Caecibacterium sporoformans V19-240a1aT
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158262

Type strain:

Species: Caecibacterium sporoformans

Strain Designation: V19-240a1aT

Culture col. no.: DSM 100432

Strain history: <- D. Petzoldt, Lohmann Animal Health GmbH, Hannover, Germany; V19-240a1aT

NCBI tax ID(s): 915180 (species)

SI-ID 398064

DSM 100432

Other strains from Caecibacterium sporoformans

C. sporoformans 77-5, DSM 103070, LMG 27730 (type strain)

Section

Caecibacterium sporoformans V19-240a1aT is a mesophilic bacterium that was isolated from chicken cecum.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	[Bacillota, not assigned to class]
	Order	[Bacillota, not assigned to order]
	Family	[Bacillota, not assigned to family]
	Genus	*Caecibacterium*
	Species	**Caecibacterium sporoformans**
	Full Scientific Name (LPSN)	Caecibacterium sporoformans Oren et al. 2019

Synonym

"Caecibacterium sporoformans"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64921]

Culture medium

PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)

[Ref.: #64921]

Culture medium growth

[Ref.: #64921]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64921]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64921]			growth	37 °C

[Ref.: #64921]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64921]	Sample type/isolated from	chicken cecum
[Ref.: #64921]	Geographic location (country and/or sea, region)	Lower Saxony
[Ref.: #64921]	Country	Germany
[Ref.: #64921]	Country ISO 3 Code	DEU
[Ref.: #64921]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Birds	#Chicken
#Host Body-Site	#Gastrointestinal tract	#Large intestine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX017589 (>99% sequence identity) for Caecibacterium sporoformans subclade from Microbeatlas

Aquatic Samples	476
Soil Samples	237
Animal Samples	6153
Plant Samples	127
Total Samples	6993

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64921]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64921]	Lachnospiraceae bacterium V19-240a1aT 16S ribosomal RNA gene, partial sequence	KX017589	1379	ENA	915180 tax ID

Availability in culture collections External links

[Ref.: #64921]

Culture collection no.

DSM 100432

[Ref.: #111080]

SI-ID 398064

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64921

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100432

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111080

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398064.1 )

* These data were automatically processed and therefore are not curated

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