Streptomyces roietensis WES2 is an aerobe, spore-forming, Gram-positive bacterium that builds a substrate mycelium and was isolated from surface-sterilized stem of jasmine rice Oryza sativa KDML 105.
spore-forming Gram-positive aerobe 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces roietensis |
| Full scientific name Streptomyces roietensis Kaewkla and Franco 2017 |
| 65253 | Gram stainpositive |
| @ref | Production | Name | |
|---|---|---|---|
| 65253 | melanin pigment |
| @ref: | 64917 |
| multimedia content: | DSM_101729.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_101729.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 64917 |
| multimedia content: | DSM_101729.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_101729.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 64917 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 64917 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 65253 | ISP2 | ||||
| 65253 | ISP3 | ||||
| 65253 | ISP4 | ||||
| 65253 | ISP5 | ||||
| 65253 | ISP7 | ||||
| 65253 | Bennett's agar | ||||
| 65253 | half-strength potato dextrose agar | ||||
| 65253 | Nutrient agar (NA) | ||||
| 64917 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 20.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l NaCl 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water |
| 65253 | Oxygen toleranceaerobe |
| @ref | Spore description | Spore formation | |
|---|---|---|---|
| 65253 | A rod-shaped spore (0.8 µm diameter x 1.1 µm length) |
| 65253 | Observationstrongly inhibit bacterial leaf blight; X. oryzae KHWK 4.1_UBN_06 in vitro. |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 65253 | 16651 ChEBI | (S)-lactate | + | assimilation | |
| 65253 | 30089 ChEBI | acetate | + | assimilation | |
| 65253 | 16716 ChEBI | benzene | + | assimilation | |
| 65253 | 16150 ChEBI | benzoate | - | assimilation | |
| 65253 | 62968 ChEBI | cellulose | + | builds acid from | |
| 65253 | 16947 ChEBI | citrate | + | assimilation | |
| 65253 | 17113 ChEBI | erythritol | - | builds acid from | |
| 65253 | 4853 ChEBI | esculin | + | hydrolysis | |
| 65253 | 28757 ChEBI | fructose | + | builds acid from | |
| 65253 | 33984 ChEBI | fucose | + | builds acid from | |
| 65253 | 28260 ChEBI | galactose | + | builds acid from | |
| 65253 | 17234 ChEBI | glucose | + | builds acid from | |
| 65253 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 65253 | 30849 ChEBI | L-arabinose | + | builds acid from | |
| 65253 | 30924 ChEBI | L-tartrate | - | assimilation | |
| 65253 | 17895 ChEBI | L-tyrosine | + | hydrolysis | |
| 65253 | 25115 ChEBI | malate | + | assimilation | |
| 65253 | 17306 ChEBI | maltose | + | builds acid from | |
| 65253 | 29864 ChEBI | mannitol | + | builds acid from | |
| 65253 | 37684 ChEBI | mannose | + | builds acid from | |
| 65253 | 320055 ChEBI | methyl beta-D-glucopyranoside | + | builds acid from | |
| 65253 | 17268 ChEBI | myo-inositol | + | builds acid from | |
| 65253 | 15882 ChEBI | phenol | - | carbon source | |
| 65253 | 17272 ChEBI | propionate | + | assimilation | |
| 65253 | 16227 ChEBI | pyridine | + | assimilation | |
| 65253 | 16634 ChEBI | raffinose | + | builds acid from | |
| 65253 | 33942 ChEBI | ribose | + | builds acid from | |
| 65253 | skimmed milk | + | hydrolysis | ||
| 65253 | 30911 ChEBI | sorbitol | - | builds acid from | |
| 65253 | 28017 ChEBI | starch | + | hydrolysis | |
| 65253 | 17992 ChEBI | sucrose | + | builds acid from | |
| 65253 | 17578 ChEBI | toluene | + | assimilation | |
| 65253 | 27082 ChEBI | trehalose | + | builds acid from | |
| 65253 | 16199 ChEBI | urea | - | hydrolysis | |
| 65253 | 27226 ChEBI | uric acid | - | hydrolysis | |
| 65253 | 18222 ChEBI | xylose | + | builds acid from |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) | |
| #Host Body-Site | #Plant | #Stem (Branch) | |
| #Engineered | #Treatment | #Sterilized (Desinfected) |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | Enrichment culture | Enrichment culture duration | Enrichment culture temperature | Isolation procedure | Latitude | Longitude | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64917 | surface-sterilized stem of jasmine rice Oryza sativa KDML 105 | Roi Et Province, Surin Rice Research Centre (16° 3' N, 103° 39' E) | Thailand | THA | Asia | 16.05 | 103.65 16.05/103.65 | ||||||
| 65253 | stem sample of a jasmine rice plant (Oryza sativa KDML 105) | 2012 | Thung Kura Rong Hai paddy field, Roi Et Province | Thailand | THA | Asia | humic acid-vitamin agar | 2 weeks | 37 | Crushed surface-sterilized stem tissue was placed onto HVA medium. WES2T emerged as a small colony from the stem tissue after incubation for 2 weeks at 37°C. |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 64917 | 1 | Risk group (German classification) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Streptomyces roietensis sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of jasmine rice, Oryza sativa KDML 105. | Kaewkla O, Franco CMM | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002402 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #64917 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101729 |
| #65253 | Onuma Kaewkla, Christopher Milton Mathew Franco: Streptomyces roietensis sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of jasmine rice, Oryza sativa KDML 105. IJSEM 67: 4868 - 4872 2017 ( DOI 10.1099/ijsem.0.002402 , PubMed 28984216 ) |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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